; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015238 (gene) of Chayote v1 genome

Gene IDSed0015238
OrganismSechium edule (Chayote v1)
DescriptionPAP/OAS1 substrate-binding domain superfamily
Genome locationLG14:5776811..5778536
RNA-Seq ExpressionSed0015238
SyntenySed0015238
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025382.1 putative NT domain of poly(A) polymerase and terminal uridylyl transferase-containing protein [Cucumis melo var. makuwa]6.9e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +  WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

TYK09788.1 putative NT domain of poly(A) polymerase and terminal uridylyl transferase-containing protein [Cucumis melo var. makuwa]6.9e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +  WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

XP_004142733.1 uncharacterized protein LOC101207419 [Cucumis sativus]2.8e-0632.24Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +C WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

XP_008463256.1 PREDICTED: uncharacterized protein LOC103501459 [Cucumis melo]6.9e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +  WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

XP_038881653.1 uncharacterized protein LOC120073103 [Benincasa hispida]1.4e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG------------------------------------------------------PV-----------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSKG                                                      PV           
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG------------------------------------------------------PV-----------

Query:  ------------------CSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                          C+S++  +C WSQEVSIH GNAND V G  D +G
Subjt:  ------------------CSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

TrEMBL top hitse value%identityAlignment
A0A0A0KXT7 Uncharacterized protein1.4e-0632.24Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +C WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

A0A1S3CIU5 uncharacterized protein LOC1035014593.3e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +  WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

A0A2N9HL20 Uncharacterized protein2.2e-0478.79Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG
        G+E NSRTF +KHLNIVDPL+ENNNL  SVSKG
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG

A0A5A7SJL9 Putative NT domain of poly(A) polymerase and terminal uridylyl transferase-containing protein3.3e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +  WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

A0A5D3CEY2 Putative NT domain of poly(A) polymerase and terminal uridylyl transferase-containing protein3.3e-0531.58Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------
        G+E NSR F IKHLNIVDPL+ENNNL  SVSK                                                                    
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSK--------------------------------------------------------------------

Query:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG
                       G VC+SD+  +  WSQEVSIHGGNAND   G  D VG
Subjt:  ---------------GPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51620.1 PAP/OAS1 substrate-binding domain superfamily2.5e-0569.7Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG
        G E N R F  KHLNIVDPL+E NNL  SVSKG
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG

AT3G51620.2 PAP/OAS1 substrate-binding domain superfamily2.5e-0569.7Show/hide
Query:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG
        G E N R F  KHLNIVDPL+E NNL  SVSKG
Subjt:  GHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKG

AT3G61690.1 nucleotidyltransferases6.2e-0458.06Show/hide
Query:  EKNSRTFLIKHLNIVDPLQENNNLCLSVSKG
        E   + F+ KH N++DPL+ENNNL  SVSKG
Subjt:  EKNSRTFLIKHLNIVDPLQENNNLCLSVSKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCGGGGCATGAGAAAAACTCGAGGACGTTTCTCATAAAGCATCTTAACATCGTTGATCCACTGCAAGAAAATAACAACCTTTGTCTCAGTGTAAGCAAAGGCCC
TGTGTGTTCTAGTGACTCTGATGAAGAATGTAGATGGAGTCAAGAGGTATCAATTCATGGTGGAAATGCCAATGATACGGTATCGGGTACGTCTGACCAGGTCGGCGTAA
AAACCATCTCGAGGAAGATCTTTCCAAGTGAAACCAAATCAGTTCCCCAGATGCCATTTGTGTTGCAGATTATCATCTTGCTGGAGATGCAAATGATCTTGCTAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCGGGGCATGAGAAAAACTCGAGGACGTTTCTCATAAAGCATCTTAACATCGTTGATCCACTGCAAGAAAATAACAACCTTTGTCTCAGTGTAAGCAAAGGCCC
TGTGTGTTCTAGTGACTCTGATGAAGAATGTAGATGGAGTCAAGAGGTATCAATTCATGGTGGAAATGCCAATGATACGGTATCGGGTACGTCTGACCAGGTCGGCGTAA
AAACCATCTCGAGGAAGATCTTTCCAAGTGAAACCAAATCAGTTCCCCAGATGCCATTTGTGTTGCAGATTATCATCTTGCTGGAGATGCAAATGATCTTGCTAGCCTGA
Protein sequenceShow/hide protein sequence
MFSGHEKNSRTFLIKHLNIVDPLQENNNLCLSVSKGPVCSSDSDEECRWSQEVSIHGGNANDTVSGTSDQVGVKTISRKIFPSETKSVPQMPFVLQIIILLEMQMILLA