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Sed0015275 (gene) of Chayote v1 genome

Gene IDSed0015275
OrganismSechium edule (Chayote v1)
Descriptioncold and drought-regulated protein CORA-like isoform X1
Genome locationLG05:33905825..33906642
RNA-Seq ExpressionSed0015275
SyntenySed0015275
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645725.1 hypothetical protein Csa_020407 [Cucumis sativus]1.8e-0643.26Show/hide
Query:  MRSKAFIFLGLL----FVVSLEVAARDLAHASIKRDN----ETNGLEDVK--NGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGG
        M SKAF+FLGLL     ++S EVAARDLA  S K DN    ETNG+ED K   G YD+GYG                               GY+  YGG
Subjt:  MRSKAFIFLGLL----FVVSLEVAARDLAHASIKRDN----ETNGLEDVK--NGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGG

Query:  SYDNNHGGHGYDAKYGGYDQGYG-GHHGGSYGGSNDHGSHG
         YD  +GG GYD  YGG   GYG GH+GG  G     G +G
Subjt:  SYDNNHGGHGYDAKYGGYDQGYG-GHHGGSYGGSNDHGSHG

KAG6572253.1 Glycine-rich protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0442.38Show/hide
Query:  MRSKAFIFLGLLF----VVSLEVAARDLAHASIKRDN----ETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSY
        M SKAFIFLGLLF    ++S EVAARDLA  S K++N    ETNG+ED K G YD GYG   G   GGY   GG+G                        
Subjt:  MRSKAFIFLGLLF----VVSLEVAARDLAHASIKRDN----ETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSY

Query:  DNNHGGHGYDAKYGGYDQGYGGHHGGSYGGSNDHGSHGY----YGGVEING
            GG+G    YGG   GYGG  GG YG    +G  GY    Y G  + G
Subjt:  DNNHGGHGYDAKYGGYDQGYGGHHGGSYGGSNDHGSHGY----YGGVEING

XP_003616804.1 cold and drought-regulated protein CORA isoform X1 [Medicago truncatula]1.1e-0640.26Show/hide
Query:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGY----GDHHGDHY----GGYNDHGG---HGHGDVENAKHGRYNQGYES
        KA + LGLL   ++S  ++ARDL   S     E    TN + D K G Y  GY    G ++G  Y    GGYN+ GG   HG G   N   G YN G   
Subjt:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGY----GDHHGDHY----GGYNDHGG---HGHGDVENAKHGRYNQGYES

Query:  YYGGSYDN-----NHGGHGYDAKYGGYD--QGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDN
        Y GG Y++     NHGG GY+   GGY+   G+GGH GG Y G   HG HG    V +      N + D KYGG   GY N+ GGSY H       G   
Subjt:  YYGGSYDN-----NHGGHGYDAKYGGYD--QGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDN

Query:  HHGGHGYDVKYGGHDKDYEDHHDDGYNHGGH
        HHGG GY+   GGH          G  HGGH
Subjt:  HHGGHGYDVKYGGHDKDYEDHHDDGYNHGGH

XP_022952570.1 cold and drought-regulated protein CORA-like isoform X1 [Cucurbita moschata]6.2e-0748.25Show/hide
Query:  MRSKAFIFLGLLF----VVSLEVAARDLAHASIKRDN----ETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSY
        M SKAFIFLGLLF    ++S EVAARDLA  S K++N    ETNG+ED K G YD GYG   G   GGY   GG+G         GR   G    YGG  
Subjt:  MRSKAFIFLGLLF----VVSLEVAARDLAHASIKRDN----ETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSY

Query:  DNNHGGHGYDAKYG
            GG+G   +YG
Subjt:  DNNHGGHGYDAKYG

XP_039690324.1 abscisic acid and environmental stress-inducible protein isoform X2 [Medicago truncatula]2.6e-0539.32Show/hide
Query:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGY----GDHHGDHY----GGYNDHGG---HGHGDVENAKHGRYNQGYES
        KA + LGLL   ++S  ++ARDL   S     E    TN + D K G Y  GY    G ++G  Y    GGYN+ GG   HG G   N   G YN G   
Subjt:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGY----GDHHGDHY----GGYNDHGG---HGHGDVENAKHGRYNQGYES

Query:  YYGGSYDN-----NHGGHGYDAKYGGYD--QGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDN
        Y GG Y++     NHGG GY+   GGY+   G+GGH GG Y G   HG HG    V +      N + D KYGG     G Y+ G  GH  H        
Subjt:  YYGGSYDN-----NHGGHGYDAKYGGYD--QGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDN

Query:  HHGGHG
         HGGHG
Subjt:  HHGGHG

TrEMBL top hitse value%identityAlignment
A0A0A0K1B1 Cell wall glycine-rich protein1.9e-0945.76Show/hide
Query:  MRSKAFIFLGLL----FVVSLEVAARDLAHASIKRDN----ETNGLEDVK--NGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGG
        M SKAF+FLGLL     ++S EVAARDLA  S K DN    ETNG+ED K   G YD+GYG  +   YGG  D G              Y  GY+  YGG
Subjt:  MRSKAFIFLGLL----FVVSLEVAARDLAHASIKRDN----ETNGLEDVK--NGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGG

Query:  SYDNNHGGHGYDAKY-GGYDQGYGGHHGGSYGGSNDHGSHGYYGGVEINGLEDVKYGGYNKGYGNY-HGGSYGHDNH
         YD  +GG GYD  Y GGYD+GYGG  GG YG        G+YGG           GGY  G G Y  G  YG   H
Subjt:  SYDNNHGGHGYDAKY-GGYDQGYGGHHGGSYGGSNDHGSHGYYGGVEINGLEDVKYGGYNKGYGNY-HGGSYGHDNH

A0A2R2MKA8 uncharacterized protein LOC1061686443.1e-0441.67Show/hide
Query:  DVKNGEYDKGYGDHHGDHY-GGYNDHGGHGHGDVENAKHG-RYNQGYESYYGGSYDNNHG---GHGYDAKYGGYDQGYGGHHGGSYGGSNDHGSHGYYGG
        D   G +   YGD H D Y GG++D  G GH D     HG  Y   +++ YGG +++ +G   G GYD   GG+D GYGG HGG YGG  D G  G +GG
Subjt:  DVKNGEYDKGYGDHHGDHY-GGYNDHGGHGHGDVENAKHG-RYNQGYESYYGGSYDNNHG---GHGYDAKYGGYDQGYGGHHGGSYGGSNDHGSHGYYGG

Query:  VEINGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDNHHG---GHGYDVKYGGH
            G +D   GG+  GYG  HGG YG     +  GY   HG   G+GY  + GG+
Subjt:  VEINGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDNHHG---GHGYDVKYGGH

A0A6J1GM55 cold and drought-regulated protein CORA-like isoform X13.0e-0748.25Show/hide
Query:  MRSKAFIFLGLLF----VVSLEVAARDLAHASIKRDN----ETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSY
        M SKAFIFLGLLF    ++S EVAARDLA  S K++N    ETNG+ED K G YD GYG   G   GGY   GG+G         GR   G    YGG  
Subjt:  MRSKAFIFLGLLF----VVSLEVAARDLAHASIKRDN----ETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSY

Query:  DNNHGGHGYDAKYG
            GG+G   +YG
Subjt:  DNNHGGHGYDAKYG

G7K7D2 Putative glycine rich protein5.2e-0740.26Show/hide
Query:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGY----GDHHGDHY----GGYNDHGG---HGHGDVENAKHGRYNQGYES
        KA + LGLL   ++S  ++ARDL   S     E    TN + D K G Y  GY    G ++G  Y    GGYN+ GG   HG G   N   G YN G   
Subjt:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGY----GDHHGDHY----GGYNDHGG---HGHGDVENAKHGRYNQGYES

Query:  YYGGSYDN-----NHGGHGYDAKYGGYD--QGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDN
        Y GG Y++     NHGG GY+   GGY+   G+GGH GG Y G   HG HG    V +      N + D KYGG   GY N+ GGSY H       G   
Subjt:  YYGGSYDN-----NHGGHGYDAKYGGYD--QGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDN

Query:  HHGGHGYDVKYGGHDKDYEDHHDDGYNHGGH
        HHGG GY+   GGH          G  HGGH
Subjt:  HHGGHGYDVKYGGHDKDYEDHHDDGYNHGGH

G7K7D5 Uncharacterized protein4.1e-0439.27Show/hide
Query:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSYDNNHG
        KA + LGLL   ++S  ++AR+L   S     E    TN + D K G Y+ G G +HG   GGYN  GG+ HG       G Y+ G   Y+ G    NHG
Subjt:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE----TNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSYDNNHG

Query:  GHGYDAKYGGYDQGYGGHH-GGSYGGSNDHGSHGYYGGVE---------INGLEDVKYGGYNKGYGNY-HGGSYGHDNHNNDHGYDN-HHGGHGYDVKYG
        G GY+   GG   G+GG++ GG +GG N  G HG +G  E          N + D KYGG     G+Y HGGSY H   + +HG  + HHGG GY+   G
Subjt:  GHGYDAKYGGYDQGYGGHH-GGSYGGSNDHGSHGYYGGVE---------INGLEDVKYGGYNKGYGNY-HGGSYGHDNHNNDHGYDN-HHGGHGYDVKYG

Query:  GHDKDYEDHHDDGYNHGGH
        GH          G  HGGH
Subjt:  GHDKDYEDHHDDGYNHGGH

SwissProt top hitse value%identityAlignment
Q07202 Cold and drought-regulated protein CORA5.0e-0738.89Show/hide
Query:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE-TNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGG--HGHGDVENAKHGRYNQGYESYYGGSYDNNHGG
        KA + L LL   ++S  ++ARDL   S     E      +V + +Y  GY    G + GGYN  GG  HG G   N   G YN G   Y GG     HGG
Subjt:  KAFIFLGLL--FVVSLEVAARDLAHASIKRDNE-TNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGG--HGHGDVENAKHGRYNQGYESYYGGSYDNNHGG

Query:  HGYDAKYGGYDQGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGG---YNKGYGNYHGGSYGHDNHNNDHGYDNHHGGHGYDVKYGGH
         GY+   GG   G+GGH GG Y G   HG HG    V +      N + D KYGG   YN G G Y+ G  G+++    HG    HGGHG    +GGH
Subjt:  HGYDAKYGGYDQGYGGHHGGSYGGSNDHGSHGYYGGVEI------NGLEDVKYGG---YNKGYGNYHGGSYGHDNHNNDHGYDNHHGGHGYDVKYGGH

Q09134 Abscisic acid and environmental stress-inducible protein6.7e-0438.41Show/hide
Query:  LLFVVSLEVAARDLAHASIKRDNE----TNGLEDVK-NGEYDKGYGDHHGDHY----GGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSYDNNHGGHGY
        ++ ++S EV+ARDL   +     E    TN + D K  G Y+ G G ++G  Y    GGYN+ GG+ HG       G YN G     GG Y  NHGG GY
Subjt:  LLFVVSLEVAARDLAHASIKRDNE----TNGLEDVK-NGEYDKGYGDHHGDHY----GGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSYDNNHGGHGY

Query:  DAKYGGYDQGYGGHHGGSYGGSNDHGSHGYYGGVEINGLEDVKYGGYNKGYGNYHGGSYGHDNH
        +   GGY+ G GG++ G  GG  +HG  GY G            GGYN G G Y+ G  G   H
Subjt:  DAKYGGYDQGYGGHHGGSYGGSNDHGSHGYYGGVEINGLEDVKYGGYNKGYGNYHGGSYGHDNH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCCAAGGCTTTCATTTTCCTTGGTCTTCTTTTCGTCGTCTCCTTAGAGGTAGCTGCGAGAGATCTTGCACATGCCTCCATTAAGAGGGATAACGAAACTAATGG
CTTAGAAGATGTCAAGAATGGAGAATACGACAAAGGTTATGGAGATCATCATGGTGATCACTATGGCGGCTATAACGACCATGGTGGTCATGGCCACGGTGACGTAGAAA
ATGCTAAGCATGGAAGATATAATCAAGGTTATGAAAGCTATTATGGTGGCTCCTATGATAATAATCATGGAGGTCATGGCTACGATGCCAAGTATGGAGGATATGACCAA
GGTTATGGAGGCCATCATGGTGGCTCCTACGGAGGCAGTAACGACCATGGTAGTCATGGCTACTATGGTGGAGTAGAGATAAATGGCCTAGAAGATGTTAAGTATGGAGG
ATATAATAAAGGTTATGGAAACTATCATGGTGGCTCGTATGGCCACGATAACCACAATAATGACCATGGCTACGATAACCACCATGGTGGTCATGGCTACGATGTCAAGT
ATGGAGGACATGACAAAGATTATGAAGACCATCATGACGATGGTTACAACCATGGAGGTCATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCCAAGGCTTTCATTTTCCTTGGTCTTCTTTTCGTCGTCTCCTTAGAGGTAGCTGCGAGAGATCTTGCACATGCCTCCATTAAGAGGGATAACGAAACTAATGG
CTTAGAAGATGTCAAGAATGGAGAATACGACAAAGGTTATGGAGATCATCATGGTGATCACTATGGCGGCTATAACGACCATGGTGGTCATGGCCACGGTGACGTAGAAA
ATGCTAAGCATGGAAGATATAATCAAGGTTATGAAAGCTATTATGGTGGCTCCTATGATAATAATCATGGAGGTCATGGCTACGATGCCAAGTATGGAGGATATGACCAA
GGTTATGGAGGCCATCATGGTGGCTCCTACGGAGGCAGTAACGACCATGGTAGTCATGGCTACTATGGTGGAGTAGAGATAAATGGCCTAGAAGATGTTAAGTATGGAGG
ATATAATAAAGGTTATGGAAACTATCATGGTGGCTCGTATGGCCACGATAACCACAATAATGACCATGGCTACGATAACCACCATGGTGGTCATGGCTACGATGTCAAGT
ATGGAGGACATGACAAAGATTATGAAGACCATCATGACGATGGTTACAACCATGGAGGTCATGAATAA
Protein sequenceShow/hide protein sequence
MRSKAFIFLGLLFVVSLEVAARDLAHASIKRDNETNGLEDVKNGEYDKGYGDHHGDHYGGYNDHGGHGHGDVENAKHGRYNQGYESYYGGSYDNNHGGHGYDAKYGGYDQ
GYGGHHGGSYGGSNDHGSHGYYGGVEINGLEDVKYGGYNKGYGNYHGGSYGHDNHNNDHGYDNHHGGHGYDVKYGGHDKDYEDHHDDGYNHGGHE