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Sed0015293 (gene) of Chayote v1 genome

Gene IDSed0015293
OrganismSechium edule (Chayote v1)
DescriptionBEST Arabidopsis thaliana protein match is: s in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Genome locationLG03:45373682..45374239
RNA-Seq ExpressionSed0015293
SyntenySed0015293
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020905.1 hypothetical protein SDJN02_17593, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-6271.35Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKS--
        MD  FH+D KNK ISRTSS+G SS +IYYCGT EGVPFKWE QPGTPKDPPPQD  LPPL+PPPAVLSLGLPK CIEQP TR RP +RLRFWRRSKK+  
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKS--

Query:  RHAQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSMSS------SSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYH
        R A+   IDYSNED F H DKLET SFLSSDCEFM S R+SMSS      SSSSSPSS  ESL+VR        R  +C AWQINRILACYH
Subjt:  RHAQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSMSS------SSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYH

KAG7029810.1 hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-6172.92Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPR--MRLRFWRRSKKS
        MDG FH+D K+K I+RTSS+G SS + YYCG AEGVPFKWE QPGTPKDPPPQD  LPPLSPPPAV+SLGLP  CIE+P TR RPR  M+LRFWRR KKS
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPR--MRLRFWRRSKKS

Query:  RH----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM-SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH
        R     AQ T IDYS       NDKLET SFLSSDCEFMASPRDSM SSSSSSSPSSL+ESL+VRN  RVS GRP SC  A +I+RILACYH
Subjt:  RH----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM-SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH

XP_022153305.1 uncharacterized protein LOC111020830 [Momordica charantia]1.0e-6173.4Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH
        MDGKFH+DTK+K ISRTSSVG SS +IYYCGTAEGVPFKWE QPGTPKDPPPQ + LPPLSPPPAVLSLGLPK CIE+PN R R RM LRFWR+S+K R 
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH

Query:  AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYH
                 N D F H DKLETSSF+SSD EFMASPRDS+    SSSSSS PSSLLESL+VRN  RVSFGRP     WQINR LACYH
Subjt:  AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYH

XP_022929606.1 uncharacterized protein LOC111436141 [Cucurbita moschata]1.4e-6172.63Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH
        MDG FH+D K+K I+RTSS+G SS + YYCG AEGVPFKWE QPGTPKDPPPQD  LPPLSPPPAV+SLGLP  CIE+P TR RP M+L FWRR KKSR 
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH

Query:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM-SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH
            AQ T IDYS       NDKLET SFLSSDCEFMASPRDSM SSSSSSSPSSL+ESL+VRN  RVS GRP SC  A +I+RILACYH
Subjt:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM-SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH

XP_022997465.1 uncharacterized protein LOC111492375 [Cucurbita maxima]1.0e-6172.02Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH
        MDG FH+D K+K I+RTSS+G SS + YYCG AEGVPFKWE QPGTPKDPPPQD  LPPLSPPPAVLSLGLP  CIE+P TR RP M+LRFWRR KKSR 
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH

Query:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH
            AQ T IDYS       N KLET SFLSSDCEFMASPRDSM    SSSSSSSPSSL+ESL+VR+  RVS GRP SCG A +I+RILACYH
Subjt:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH

TrEMBL top hitse value%identityAlignment
A0A5D3BQA0 Putative OSBP(Oxysterol binding protein)-related protein 4B9.9e-5868.34Show/hide
Query:  MDGK-FHFDTKNKAISRTSSVGYSSHTIYYCGTA-EGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPK-SCIEQPNTRHRPRMRLRFWRRSKK
        M+G+ FH+D KNK ISRTSS+G SSH+IYY GTA +GVPFKWE QPGTPKDPPPQD  LPPLSPPPAVLSLG+PK +CI+QP +R  PRMRLRFW++  K
Subjt:  MDGK-FHFDTKNKAISRTSSVGYSSHTIYYCGTA-EGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPK-SCIEQPNTRHRPRMRLRFWRRSKK

Query:  SRH----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMA--SPRDSMS----SSSSSSPSSLLESLSVRNTRRVSFGRPPSC-GAWQINRILACYHA
        SR     AQ TPID+       +NDKLET SFLSSDCEFMA  SPRDSMS    SSSSSSPSS ++SL+V NT++VSFGRP S   AWQINR+L CYH+
Subjt:  SRH----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMA--SPRDSMS----SSSSSSPSSLLESLSVRNTRRVSFGRPPSC-GAWQINRILACYHA

A0A6J1DGF8 uncharacterized protein LOC1110208305.1e-6273.4Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH
        MDGKFH+DTK+K ISRTSSVG SS +IYYCGTAEGVPFKWE QPGTPKDPPPQ + LPPLSPPPAVLSLGLPK CIE+PN R R RM LRFWR+S+K R 
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH

Query:  AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYH
                 N D F H DKLETSSF+SSD EFMASPRDS+    SSSSSS PSSLLESL+VRN  RVSFGRP     WQINR LACYH
Subjt:  AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYH

A0A6J1ENL5 uncharacterized protein LOC1114361416.6e-6272.63Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH
        MDG FH+D K+K I+RTSS+G SS + YYCG AEGVPFKWE QPGTPKDPPPQD  LPPLSPPPAV+SLGLP  CIE+P TR RP M+L FWRR KKSR 
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH

Query:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM-SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH
            AQ T IDYS       NDKLET SFLSSDCEFMASPRDSM SSSSSSSPSSL+ESL+VRN  RVS GRP SC  A +I+RILACYH
Subjt:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM-SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH

A0A6J1FCU1 Uncharacterized protein2.6e-5870.37Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKS--
        MD  FH+D KNK ISRTSS+G SS +IYYCGT EGVPFKWE QPGTPKDPPPQD  LPPL+PPPAVLSLGLPK CIEQP TR RP +RLRFWRRSKK+  
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKS--

Query:  RHAQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM------SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILA
        R A+   IDYSNED F + DKLET SFLSSDCEFM S R+SM      S SSSSSPSS  ESL+VR        R  SC AWQINRILA
Subjt:  RHAQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM------SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILA

A0A6J1K9Q8 uncharacterized protein LOC1114923755.1e-6272.02Show/hide
Query:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH
        MDG FH+D K+K I+RTSS+G SS + YYCG AEGVPFKWE QPGTPKDPPPQD  LPPLSPPPAVLSLGLP  CIE+P TR RP M+LRFWRR KKSR 
Subjt:  MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRH

Query:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH
            AQ T IDYS       N KLET SFLSSDCEFMASPRDSM    SSSSSSSPSSL+ESL+VR+  RVS GRP SCG A +I+RILACYH
Subjt:  ----AQGTPIDYSNEDPFDHNDKLETSSFLSSDCEFMASPRDSM----SSSSSSSPSSLLESLSVRNTRRVSFGRPPSCG-AWQINRILACYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)2.1e-1246.81Show/hide
Query:  KNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKS--CIEQPNTRHRP-RMRLRFWRRSKKSRH
        +  +ISR SSVGY    +      EGVPF+WE+QPGTP +  P+ + +PPLSPPPA+LSLGLPK    IE+P     P +++LR W+     R+
Subjt:  KNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKS--CIEQPNTRHRP-RMRLRFWRRSKKSRH

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B2.1e-1246.81Show/hide
Query:  KNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKS--CIEQPNTRHRP-RMRLRFWRRSKKSRH
        +  +ISR SSVGY    +      EGVPF+WE+QPGTP +  P+ + +PPLSPPPA+LSLGLPK    IE+P     P +++LR W+     R+
Subjt:  KNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKS--CIEQPNTRHRP-RMRLRFWRRSKKSRH

AT5G01790.1 unknown protein3.9e-0648.15Show/hide
Query:  SRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLS
        S  S+   S    YY G A  VPF+WE  PGTPK P  +   LPPL+PPP+  S
Subjt:  SRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAAATTTCATTTTGACACCAAGAACAAAGCAATATCAAGAACTTCTTCAGTTGGTTATTCTTCTCATACCATTTACTATTGTGGAACAGCTGAAGGAGTTCC
TTTCAAATGGGAAATACAGCCAGGAACTCCCAAAGATCCACCCCCTCAAGATCAGTTCCTTCCGCCCCTCAGCCCTCCGCCCGCGGTTCTCAGCCTCGGGTTACCGAAAT
CGTGTATTGAACAACCAAATACCCGACACCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGCATGCCCAAGGAACACCTATTGACTATAGCAAT
GAGGATCCTTTTGATCACAATGATAAGTTGGAAACTTCTTCGTTTCTTAGCTCGGATTGTGAGTTCATGGCATCTCCTCGGGATTCAATGTCGTCATCATCTTCTTCTTC
ACCATCGTCTTTGCTCGAGTCATTGTCGGTACGAAATACGAGGAGGGTGTCATTTGGAAGGCCTCCGAGTTGCGGTGCTTGGCAAATTAATCGAATTCTTGCTTGTTACC
ATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAAATTTCATTTTGACACCAAGAACAAAGCAATATCAAGAACTTCTTCAGTTGGTTATTCTTCTCATACCATTTACTATTGTGGAACAGCTGAAGGAGTTCC
TTTCAAATGGGAAATACAGCCAGGAACTCCCAAAGATCCACCCCCTCAAGATCAGTTCCTTCCGCCCCTCAGCCCTCCGCCCGCGGTTCTCAGCCTCGGGTTACCGAAAT
CGTGTATTGAACAACCAAATACCCGACACCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGCATGCCCAAGGAACACCTATTGACTATAGCAAT
GAGGATCCTTTTGATCACAATGATAAGTTGGAAACTTCTTCGTTTCTTAGCTCGGATTGTGAGTTCATGGCATCTCCTCGGGATTCAATGTCGTCATCATCTTCTTCTTC
ACCATCGTCTTTGCTCGAGTCATTGTCGGTACGAAATACGAGGAGGGTGTCATTTGGAAGGCCTCCGAGTTGCGGTGCTTGGCAAATTAATCGAATTCTTGCTTGTTACC
ATGCTTAG
Protein sequenceShow/hide protein sequence
MDGKFHFDTKNKAISRTSSVGYSSHTIYYCGTAEGVPFKWEIQPGTPKDPPPQDQFLPPLSPPPAVLSLGLPKSCIEQPNTRHRPRMRLRFWRRSKKSRHAQGTPIDYSN
EDPFDHNDKLETSSFLSSDCEFMASPRDSMSSSSSSSPSSLLESLSVRNTRRVSFGRPPSCGAWQINRILACYHA