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Sed0015362 (gene) of Chayote v1 genome

Gene IDSed0015362
OrganismSechium edule (Chayote v1)
Descriptionmini zinc finger
Genome locationLG12:30555567..30555857
RNA-Seq ExpressionSed0015362
SyntenySed0015362
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138166.1 mini zinc finger protein 3 [Cucumis sativus]4.2e-3888.54Show/hide
Query:  MKKRLVVVKKSDGS-GSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        MKKRLVVV+KSDGS G RN   +S  S VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Subjt:  MKKRLVVVKKSDGS-GSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

XP_022135253.1 mini zinc finger protein 3-like [Momordica charantia]3.8e-3989.58Show/hide
Query:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY
        MKKRLVVVKKSDGSG RNRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD +EVVFEYSPPNS+Y
Subjt:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]7.1e-3887.63Show/hide
Query:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY
        MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVD AEVVFEYSPPNS++
Subjt:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

XP_022987207.1 mini zinc finger protein 3-like [Cucurbita maxima]1.6e-3786.6Show/hide
Query:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY
        MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRR+VD AEVVFEYSPPNS++
Subjt:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

XP_038880256.1 mini zinc finger protein 3 [Benincasa hispida]2.2e-3990.62Show/hide
Query:  MKKRLVVVKKSDG-SGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        MKKRLVVVKKSDG SG RN + +S  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Subjt:  MKKRLVVVKKSDG-SGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

TrEMBL top hitse value%identityAlignment
A0A0A0LSA6 ZF-HD dimerization-type domain-containing protein2.0e-3888.54Show/hide
Query:  MKKRLVVVKKSDGS-GSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        MKKRLVVV+KSDGS G RN   +S  S VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Subjt:  MKKRLVVVKKSDGS-GSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

A0A5A7UWS7 Mini zinc finger protein 3-like1.3e-3789.8Show/hide
Query:  MKKRLVVVKKSDGS-GSRNR--SGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        MKKRLVVVKKSDGS G RN   S +SGS  VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Subjt:  MKKRLVVVKKSDGS-GSRNR--SGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

A0A6J1C4B2 mini zinc finger protein 3-like1.8e-3989.58Show/hide
Query:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY
        MKKRLVVVKKSDGSG RNRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVD +EVVFEYSPPNS+Y
Subjt:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

A0A6J1E6Q9 mini zinc finger protein 3-like3.5e-3887.63Show/hide
Query:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY
        MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVD AEVVFEYSPPNS++
Subjt:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

A0A6J1J9R5 mini zinc finger protein 3-like7.7e-3886.6Show/hide
Query:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY
        MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRR+VD AEVVFEYSPPNS++
Subjt:  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 14.1e-2063.38Show/hide
Query:  SSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        + VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+ A    + S   S+
Subjt:  SSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

Q2Q493 Mini zinc finger protein 37.7e-2767.37Show/hide
Query:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        MKKR VV+K+   S +      S SS VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAACGCHRNFHRREVD  EVV EYSPPN+N
Subjt:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

Q2RB28 Mini zinc finger protein 14.1e-2063.38Show/hide
Query:  SSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        + VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+ A    + S   S+
Subjt:  SSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

Q9CA51 Mini zinc finger protein 14.5e-2762.75Show/hide
Query:  MKKRLVVVKK----SDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPP
        MKKR +V+K+    S+ S S   + +S SS     VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD  EVV EYSPP
Subjt:  MKKRLVVVKK----SDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPP

Query:  NS
        N+
Subjt:  NS

Q9LJW5 Mini zinc finger protein 21.1e-2256.57Show/hide
Query:  MKKRLVVVKKSDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS
        M+KR VV++++      +RS ++ SS+    VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAACGCHR+FHRRE++   V    SPP++
Subjt:  MKKRLVVVKKSDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger5.5e-2867.37Show/hide
Query:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN
        MKKR VV+K+   S +      S SS VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAACGCHRNFHRREVD  EVV EYSPPN+N
Subjt:  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN

AT1G74660.1 mini zinc finger 13.2e-2862.75Show/hide
Query:  MKKRLVVVKK----SDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPP
        MKKR +V+K+    S+ S S   + +S SS     VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD  EVV EYSPP
Subjt:  MKKRLVVVKK----SDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPP

Query:  NS
        N+
Subjt:  NS

AT2G02540.1 homeobox protein 216.0e-1960Show/hide
Query:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSP
        V++Y EC KNHAA +GG A+DGC EFM  GE+G+ EAL C+ C CHRNFHRRE +  E  F +SP
Subjt:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSP

AT3G28917.1 mini zinc finger 28.2e-2456.57Show/hide
Query:  MKKRLVVVKKSDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS
        M+KR VV++++      +RS ++ SS+    VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAACGCHR+FHRRE++   V    SPP++
Subjt:  MKKRLVVVKKSDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS

AT4G24660.1 homeobox protein 229.3e-2061.11Show/hide
Query:  SDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDN
        S G G   RS   G+  +RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGCHRNFHR+E ++
Subjt:  SDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGCTGGTGGTGGTGAAGAAATCCGATGGCTCGGGCAGTAGAAACCGCTCGGGTAATTCGGGTTCGTCGGTCGTTCGCTACGCCGAGTGCCAGAAGAACCA
CGCCGCGAAGCTCGGTGGGTTTGCGGTGGACGGGTGCCGGGAATTCATGGCTAGAGGTGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGTCATAGGA
ACTTTCATAGAAGGGAGGTTGATAATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAATTCCAATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGGCTGGTGGTGGTGAAGAAATCCGATGGCTCGGGCAGTAGAAACCGCTCGGGTAATTCGGGTTCGTCGGTCGTTCGCTACGCCGAGTGCCAGAAGAACCA
CGCCGCGAAGCTCGGTGGGTTTGCGGTGGACGGGTGCCGGGAATTCATGGCTAGAGGTGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGTCATAGGA
ACTTTCATAGAAGGGAGGTTGATAATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAATTCCAATTATTGA
Protein sequenceShow/hide protein sequence
MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY