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Sed0015403 (gene) of Chayote v1 genome

Gene IDSed0015403
OrganismSechium edule (Chayote v1)
DescriptionCytochrome c6 like
Genome locationLG10:64168..65516
RNA-Seq ExpressionSed0015403
SyntenySed0015403
Gene Ontology termsGO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026384.1 Cytochrome c6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4262.42Show/hide
Query:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN
        Q KI+KTLAPPLI+VLIAL      P           A+AQ+         IE         RG ALF+ +CIGCHD GGNII P ATLFS+DL+RNGA+
Subjt:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN

Query:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
        ++++IYQITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIR+LAKFVK+QAD GWPN
Subjt:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]1.0e-4360.65Show/hide
Query:  KIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQ
        KI++TLAPPLI++L+ LS                         P   ++ ETT       RG ALF Q+CIGCHDGGGNII P ATLFS+DL+RNGA+ +
Subjt:  KIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQ

Query:  DQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
        ++IY+ITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIRLLAKFVK+QAD GWPN
Subjt:  DQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

XP_022146690.1 cytochrome c6, chloroplastic [Momordica charantia]1.9e-4262.42Show/hide
Query:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN
        Q KI K+ APPLI+VLIALS         PI          T  P   A  +E   GG       ALF+QSCIGCHDGGGNII P ATLFS+DL+RNGA+
Subjt:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN

Query:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
         +++IY ITYYGKGRMPGFG+ CKPRGQCTFGPRLQE+EIRLLAKFVK+QAD GW N
Subjt:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]1.9e-4257.84Show/hide
Query:  SATTTTPLKP-----KVQGAGAVV----QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSC
        S T+   L P     KVQ   AV     Q KI+KTLAPPLI+VLIAL      P           A+AQ+         IE         RG ALF+ +C
Subjt:  SATTTTPLKP-----KVQGAGAVV----QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSC

Query:  IGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
        IGCHD GGNII P ATLFS+DL+RNGA+++++IYQITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIR+LAKFVK+QAD GWPN
Subjt:  IGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]2.9e-4359.3Show/hide
Query:  PLKPKVQGAGAVV--QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINP
        PLK K +     +  Q KI+ +LAPPLI+V +ALS     P          +A+AQT         IE         RG ALF Q+CIGCHDGGGNII P
Subjt:  PLKPKVQGAGAVV--QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINP

Query:  AATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
         ATLFS+DL+RNGA+ +++IY+ITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIRLLAKFVK+QAD GWPN
Subjt:  AATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein1.6e-4261.15Show/hide
Query:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN
        Q KI+K L PPLI++L+ LS         P+       V   T      I IE         RG ALF QSCIGCHDGGGNII P ATLFS+DL+RNGA+
Subjt:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN

Query:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
         +++IY+ITY GKGRMPGFG+ CKPRGQCTFGPRLQEEEIRLLAKFVK+QAD GWPN
Subjt:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

A0A1S3AYD3 cytochrome c6, chloroplastic4.9e-4460.65Show/hide
Query:  KIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQ
        KI++TLAPPLI++L+ LS                         P   ++ ETT       RG ALF Q+CIGCHDGGGNII P ATLFS+DL+RNGA+ +
Subjt:  KIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQ

Query:  DQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
        ++IY+ITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIRLLAKFVK+QAD GWPN
Subjt:  DQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

A0A6J1CXZ2 cytochrome c6, chloroplastic9.2e-4362.42Show/hide
Query:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN
        Q KI K+ APPLI+VLIALS         PI          T  P   A  +E   GG       ALF+QSCIGCHDGGGNII P ATLFS+DL+RNGA+
Subjt:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN

Query:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
         +++IY ITYYGKGRMPGFG+ CKPRGQCTFGPRLQE+EIRLLAKFVK+QAD GW N
Subjt:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

A0A6J1EG38 cytochrome c6, chloroplastic9.2e-4357.84Show/hide
Query:  SATTTTPLKP-----KVQGAGAVV----QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSC
        S T+   L P     KVQ   AV     Q KI+KTLAPPLI+VLIAL      P           A+AQ+         IE         RG ALF+ +C
Subjt:  SATTTTPLKP-----KVQGAGAVV----QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSC

Query:  IGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
        IGCHD GGNII P ATLFS+DL+RNGA+++++IYQITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIR+LAKFVK+QAD GWPN
Subjt:  IGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

A0A6J1KPJ4 cytochrome c6, chloroplastic1.2e-4261.78Show/hide
Query:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN
        Q K +K LAPPLI+VLIAL      P           A+AQ+         IE         RG ALF+ +CIGCHDGGGNII P ATLFS+DL+RNGA+
Subjt:  QDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGAN

Query:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN
        ++++IYQITYYGKGRMPGFG+ CKPRGQCTFGPRLQEEEIR+LAKFVK+QAD GWPN
Subjt:  TQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPN

SwissProt top hitse value%identityAlignment
B7JYX3 Cytochrome c63.4e-1034.58Show/hide
Query:  AIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVK
        A+M+   +  G    G+ +FT  C  CH GG N++NPA TL   DL+ NG  + D I      GK  MP             FG  L  E+I  +A +V 
Subjt:  AIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVK

Query:  MQADLGW
         QA+  W
Subjt:  MQADLGW

P00116 Cytochrome c64.9e-0938.04Show/hide
Query:  GRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGW
        G ALF  +C  CH GGGN++N A TL    L++    +   I     +GKG MP             FG RL+ E+I  +A +V  QAD GW
Subjt:  GRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGW

P25935 Cytochrome c62.4e-0834.78Show/hide
Query:  GRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGW
        G  +F+ +C  CH GG N++NPA TL   DL + G  + + I      GKG MP FG K            L  ++I  +A +V  Q++ GW
Subjt:  GRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGW

P46445 Cytochrome c63.8e-0936.96Show/hide
Query:  GRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGW
        G+A+F  +C  CH+GG N INP+ TL   DL+ NG N+   I      G G MPGF      +G      R+ + ++  +A +V  QA+ GW
Subjt:  GRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGW

Q93VA3 Cytochrome c6, chloroplastic2.0e-3954.19Show/hide
Query:  DKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANT
        D ++K LAPPL +VL+A+S PI  P P  +    +I                         RG  LF ++CIGCHD GGNII P ATLF+ DL+RNG +T
Subjt:  DKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANT

Query:  QDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWP
        +++IY++TY+GKGRMPGFG+KC PRGQCTFGPRLQ+EEI+LLA+FVK QAD GWP
Subjt:  QDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c1.5e-4054.19Show/hide
Query:  DKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANT
        D ++K LAPPL +VL+A+S PI  P P  +    +I                         RG  LF ++CIGCHD GGNII P ATLF+ DL+RNG +T
Subjt:  DKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGGNIINPAATLFSTDLQRNGANT

Query:  QDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWP
        +++IY++TY+GKGRMPGFG+KC PRGQCTFGPRLQ+EEI+LLA+FVK QAD GWP
Subjt:  QDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTCCTGTTCTTCATGTGTCTCTTCGCTCTGCTACTACTACTACTCCGCTAAAGCCAAAGGTGCAGGGAGCAGGGGCAGTAGTACAAGATAAGATTGTGAAGAC
TTTGGCCCCTCCTCTCATTTCTGTGCTTATAGCATTATCTGATCCTATTCCTATTCCTATTCCTATTCCTATTCTCCACAATTACAATATTGCTGTTGCTCAAACAACGC
CACCGCCGCCTGCGGCAATAATGATTGAAACAACATCAGGAGGAGGAGGAAGAGGAAGGGGAAGGGCATTGTTCACTCAATCTTGCATTGGCTGCCATGATGGAGGAGGA
AACATAATTAACCCAGCTGCCACACTCTTTTCAACTGATCTTCAAAGAAATGGAGCTAATACCCAAGACCAGATCTACCAAATTACATATTACGGCAAAGGAAGAATGCC
TGGTTTTGGTGACAAGTGTAAGCCAAGGGGCCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAGATTAGGCTTTTGGCCAAGTTTGTGAAGATGCAGGCAGATCTGG
GGTGGCCAAACCACCCCCCATAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAAAAAGGATGTATTGGAGAGAGGGGTGAAGGGGGGAAGGGTTATCTAAAAGAAAAGGCAGGGAGAGGTGGAGGAAAGAAAGAATGCATCTTCCTGTTCTTCATGT
GTCTCTTCGCTCTGCTACTACTACTACTCCGCTAAAGCCAAAGGTGCAGGGAGCAGGGGCAGTAGTACAAGATAAGATTGTGAAGACTTTGGCCCCTCCTCTCATTTCTG
TGCTTATAGCATTATCTGATCCTATTCCTATTCCTATTCCTATTCCTATTCTCCACAATTACAATATTGCTGTTGCTCAAACAACGCCACCGCCGCCTGCGGCAATAATG
ATTGAAACAACATCAGGAGGAGGAGGAAGAGGAAGGGGAAGGGCATTGTTCACTCAATCTTGCATTGGCTGCCATGATGGAGGAGGAAACATAATTAACCCAGCTGCCAC
ACTCTTTTCAACTGATCTTCAAAGAAATGGAGCTAATACCCAAGACCAGATCTACCAAATTACATATTACGGCAAAGGAAGAATGCCTGGTTTTGGTGACAAGTGTAAGC
CAAGGGGCCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAGATTAGGCTTTTGGCCAAGTTTGTGAAGATGCAGGCAGATCTGGGGTGGCCAAACCACCCCCCATAG
GAGGAGATGCAGCAAATGCTTCATTATAATGTTCACCCTTTGTATCAAATTCAACTCTAATCCCAAATGGCACAAGTTTAGTTTCATGGGGGTGTGATCTGGTCTTGTCC
TGCTTTACCTCTTACCACATTATTATCATTAGTAGTAGTATTTATTATTATGTTTCTAAGGCCGACATACATATGAAATCAACATCCACACACCTACATTTGGCTTGGCA
CCACAATGATCAAAACCACTTGTATATATCTATTTCAATTTCAGTACCAAATTGAATCTATAATATATTTCCCACTCACGAAGATGACTCTTTGATATA
Protein sequenceShow/hide protein sequence
MHLPVLHVSLRSATTTTPLKPKVQGAGAVVQDKIVKTLAPPLISVLIALSDPIPIPIPIPILHNYNIAVAQTTPPPPAAIMIETTSGGGGRGRGRALFTQSCIGCHDGGG
NIINPAATLFSTDLQRNGANTQDQIYQITYYGKGRMPGFGDKCKPRGQCTFGPRLQEEEIRLLAKFVKMQADLGWPNHPP