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Sed0015404 (gene) of Chayote v1 genome

Gene IDSed0015404
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:5185603..5187051
RNA-Seq ExpressionSed0015404
SyntenySed0015404
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]7.4e-2274.07Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR
        M+RSSSTSR+ DEFSVDL P  ISS PLKNEA  +LP+FKSN+ +KKEMG   KSPG NAVHLIPL LFL ALILWVCS+R
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR

KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]5.7e-2275Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS
        M+RSSSTSR+ +EFSVDL P  ISS PLKNEA  +LP+FKSN+ +KKEMGS  KSPGENAVHLIPL LFL ALILWVCS+
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS

KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2677.78Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAP-DLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR
        MHRSSSTSRN DE+SVD+ PGF SS PLKNEAP DLLP+FK +T KKEMG H K PG+NAVHLIPL+L LSALILW+CSSR
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAP-DLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR

KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2677.78Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAP-DLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR
        MHRSSSTSRN DE+SVD+ PGF SS PLKNEAP DLLP+FK +T KKEMG H K PG+NAVHLIPL+L LSALILW+CSSR
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAP-DLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR

KCW79774.1 hypothetical protein EUGRSUZ_C01116 [Eucalyptus grandis]6.3e-1353.09Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFK---SNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS
        MHR SS SR+ DEF V+L P   + + L+N + + LP+F+   S+ +KKE G+H++SPGE A+HLIP+VLFL AL LW+CS
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFK---SNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS

TrEMBL top hitse value%identityAlignment
A0A059CNE3 Uncharacterized protein3.0e-1353.09Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFK---SNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS
        MHR SS SR+ DEF V+L P   + + L+N + + LP+F+   S+ +KKE G+H++SPGE A+HLIP+VLFL AL LW+CS
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFK---SNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS

A0A067KJC2 Uncharacterized protein4.4e-1257.5Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT--SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS
        MHRSSSTSR  DE SV+ S      +P+K  +   LP++KS++  SKKE+G H KS GENAVHLIPL+L L ALILW+ S
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT--SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS

A0A0A0LTP3 Uncharacterized protein5.5e-2375.31Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR
        M+RSSSTSR+ +EFSVDL P  ISS PLKNEA  +LP+FKSN+ +KKEMGS  KSPGENAVHLIPL LFL ALILWVCS+R
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR

A0A438EIF2 Uncharacterized protein5.2e-1357.5Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFK--SNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS
        M+RS+STSR  DEF V+L P  + S PLK  A + LP++   S+ +KKEM  H KS GENA+HLIPL+L L ALILWV S
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFK--SNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCS

A0A5A7TZH0 Uncharacterized protein3.6e-2274.07Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR
        M+RSSSTSR+ DEFSVDL P  ISS PLKNEA  +LP+FKSN+ +KKEMG   KSPG NAVHLIPL LFL ALILWVCS+R
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNT-SKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein5.7e-0433.33Show/hide
Query:  MHRSSSTSRNIDEFSVDL-----SPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS
        M RS+S S   D+ S +      SP  I ++   +++  LLP +  N+   +         ENA+H IP+VL L A+ILW+ S+
Subjt:  MHRSSSTSRNIDEFSVDL-----SPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS

AT2G35658.2 unknown protein5.7e-0433.33Show/hide
Query:  MHRSSSTSRNIDEFSVDL-----SPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS
        M RS+S S   D+ S +      SP  I ++   +++  LLP +  N+   +         ENA+H IP+VL L A+ILW+ S+
Subjt:  MHRSSSTSRNIDEFSVDL-----SPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS

AT2G35658.3 unknown protein5.7e-0433.33Show/hide
Query:  MHRSSSTSRNIDEFSVDL-----SPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS
        M RS+S S   D+ S +      SP  I ++   +++  LLP +  N+   +         ENA+H IP+VL L A+ILW+ S+
Subjt:  MHRSSSTSRNIDEFSVDL-----SPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSS

AT4G16840.1 unknown protein9.7e-0436.14Show/hide
Query:  MHRSSSTSRNIDEFSVD--LSPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSP---GENAVHLIPLVLFLSALILWVCS
        M RS+S SR +D F       P   S   ++++   LLP +  N+   + G   KS     EN +HLIPL+L L   ILW+ S
Subjt:  MHRSSSTSRNIDEFSVD--LSPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSP---GENAVHLIPLVLFLSALILWVCS

AT5G20045.1 unknown protein3.5e-0639.76Show/hide
Query:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKS----PGENAVHLIPLVLFLSALILWVCSS
        M R   +SR  +EF ++LS        + + +PD L V+  + +KKE+  H  S     GE A+HLIP+VLFL   +LWV SS
Subjt:  MHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKS----PGENAVHLIPLVLFLSALILWVCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATTACATGCTTGATGCCTCAAGTGGAGTTCAGCACTCACTCGTCTATGAAATGCATAGGTCTTCAAGCACATCCCGGAACATCGACGAGTTTTCGGTTGACTT
GTCACCGGGTTTCATCAGCTCGGCACCATTGAAGAATGAAGCTCCTGATCTCTTGCCAGTGTTTAAGAGTAATACCTCCAAGAAAGAGATGGGGTCGCATGTTAAATCTC
CAGGAGAGAATGCAGTTCATCTTATTCCTCTTGTTCTGTTTCTTTCTGCTTTAATCCTTTGGGTTTGTTCATCCAGGTAA
mRNA sequenceShow/hide mRNA sequence
TGGTGGTTTAAACTTGTCGAGTACTGCTAGGCTAAGCCCGTTTGGTATTCTTATCTCTACAGTTGTCTCAAAACGATGTAGGCTGGTCTCCCTTTCAGTTATCTCATGGA
TTTTGCCTGTCTCACAAGTCACAACAAGGGAGTTCGTGGTTACTGTTTTTTCCCCTTTTTTGATTTTTTTCTTCTTCTTTGATATCTGGAATTCTGATGGGACAACGGTT
TGATACTATAGTCAACTTTTATGTGCTTCAATTGATTTCAGATTTGGTTCTTTGCAATTTGTTGCCTCTTGGAACAATTGTCATGTGACCGAACTCCTTTCATTGAATTG
AATGTGCAGGAACTTCAAATCGTTGCTGAAGATGTTTATACATGACATTGTCGAAGAAGTGGAAAAATGTCGAATTACATGCTTGATGCCTCAAGTGGAGTTCAGCACTC
ACTCGTCTATGAAATGCATAGGTCTTCAAGCACATCCCGGAACATCGACGAGTTTTCGGTTGACTTGTCACCGGGTTTCATCAGCTCGGCACCATTGAAGAATGAAGCTC
CTGATCTCTTGCCAGTGTTTAAGAGTAATACCTCCAAGAAAGAGATGGGGTCGCATGTTAAATCTCCAGGAGAGAATGCAGTTCATCTTATTCCTCTTGTTCTGTTTCTT
TCTGCTTTAATCCTTTGGGTTTGTTCATCCAGGTAAAATTTGAGTACAACAGATCCATAATGTAACTCAATGCTGCCTTCTTCCCTCAGC
Protein sequenceShow/hide protein sequence
MSNYMLDASSGVQHSLVYEMHRSSSTSRNIDEFSVDLSPGFISSAPLKNEAPDLLPVFKSNTSKKEMGSHVKSPGENAVHLIPLVLFLSALILWVCSSR