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Sed0015410 (gene) of Chayote v1 genome

Gene IDSed0015410
OrganismSechium edule (Chayote v1)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationLG01:14585600..14596553
RNA-Seq ExpressionSed0015410
SyntenySed0015410
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459054.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]5.2e-5563.22Show/hide
Query:  TIGPHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        T  PH  AD++A  K+  KG   +YPRG NITWGND+RYW+   P +P SL +AELKQVSWLEVT STD +E+G+ Y+VGFN+T+   AFGW+G +VYVM
Subjt:  TIGPHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGK GKF S KVSL E  P    +TIP+EPLEI V  STPKE RTIH GLYEVW+ KWKGGL+IHDAFI  +
Subjt:  AKVGKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
XP_022142415.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]6.1e-7276.3Show/hide
Query:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        MTIGPH VADQ+A+AKD KGN   YPRGLNITWGND+RYWH +    P+S SVAELKQVSWLEVT STD +E+GKKYKVGFNV++   AFGWNG  VYVM
Subjt:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGKSGKF+ KKVSL +KP NQ L IPEEPLEI V+ASTPKE RTIH GLYEVWTQKWKGGL+IHDAF+Q I
Subjt:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
XP_022142416.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]3.7e-6975Show/hide
Query:  TIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMA
        T GPH VAD++A+ KD KGN  IYPRG NITWGND+RYWH +    P+S SVAELKQVSWLEVT STD +EIGK YKVGFNV++   AFGWNG  VYVMA
Subjt:  TIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMA

Query:  KVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        KVGKSGKF+ KKVSL +K  N+KLTIPEEPLEI V+ASTPK+ RTIH GLYEVWTQKWKGGLKIHDAFIQ I
Subjt:  KVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
XP_022994910.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]5.2e-5561.85Show/hide
Query:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        M  GPH VA++ A  K +K  + IYPRG NITWGND+RYW    P    +LS+AELKQVSWLEVT STD +E+GK YKVGFNV+L   AFGW G +VYVM
Subjt:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGKSG F  KKVSL +   NQ   IP+ PL I ++ ST KE R+IH GLYEVW+ KWKGGL+IH+AFI+ I
Subjt:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
XP_038894850.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]5.2e-5563.37Show/hide
Query:  PHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKV
        PH  AD++A+ KD +KG   IYPRG NITWGND+RYW+   P  P SL +AELKQVSWLEVT STD ++ G KY+VGFNVT+ S AFGW+  +VYVMAKV
Subjt:  PHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKV

Query:  GKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNIA
        G+ GKF+S KVSL + KP    +TIP++PL I V+ STP E +TIH GLYEVW+ KWKGGL+IHDAFIQ +A
Subjt:  GKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNIA
TrEMBL top hitse value%identityAlignment
A0A1S3C9E6 protein PHLOEM PROTEIN 2-LIKE A9-like2.5e-5563.22Show/hide
Query:  TIGPHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        T  PH  AD++A  K+  KG   +YPRG NITWGND+RYW+   P +P SL +AELKQVSWLEVT STD +E+G+ Y+VGFN+T+   AFGW+G +VYVM
Subjt:  TIGPHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGK GKF S KVSL E  P    +TIP+EPLEI V  STPKE RTIH GLYEVW+ KWKGGL+IHDAFI  +
Subjt:  AKVGKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
A0A5A7TIU6 Protein PHLOEM PROTEIN 2-LIKE A9-like2.5e-5563.22Show/hide
Query:  TIGPHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        T  PH  AD++A  K+  KG   +YPRG NITWGND+RYW+   P +P SL +AELKQVSWLEVT STD +E+G+ Y+VGFN+T+   AFGW+G +VYVM
Subjt:  TIGPHTVADQSAMAKD-DKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGK GKF S KVSL E  P    +TIP+EPLEI V  STPKE RTIH GLYEVW+ KWKGGL+IHDAFI  +
Subjt:  AKVGKSGKFISKKVSL-ENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
A0A6J1CKW1 protein PHLOEM PROTEIN 2-LIKE A9-like3.0e-7276.3Show/hide
Query:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        MTIGPH VADQ+A+AKD KGN   YPRGLNITWGND+RYWH +    P+S SVAELKQVSWLEVT STD +E+GKKYKVGFNV++   AFGWNG  VYVM
Subjt:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGKSGKF+ KKVSL +KP NQ L IPEEPLEI V+ASTPKE RTIH GLYEVWTQKWKGGL+IHDAF+Q I
Subjt:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
A0A6J1CM42 protein PHLOEM PROTEIN 2-LIKE A9-like1.8e-6975Show/hide
Query:  TIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMA
        T GPH VAD++A+ KD KGN  IYPRG NITWGND+RYWH +    P+S SVAELKQVSWLEVT STD +EIGK YKVGFNV++   AFGWNG  VYVMA
Subjt:  TIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMA

Query:  KVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        KVGKSGKF+ KKVSL +K  N+KLTIPEEPLEI V+ASTPK+ RTIH GLYEVWTQKWKGGLKIHDAFIQ I
Subjt:  KVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
A0A6J1K2M8 protein PHLOEM PROTEIN 2-LIKE A9-like2.5e-5561.85Show/hide
Query:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM
        M  GPH VA++ A  K +K  + IYPRG NITWGND+RYW    P    +LS+AELKQVSWLEVT STD +E+GK YKVGFNV+L   AFGW G +VYVM
Subjt:  MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVM

Query:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        AKVGKSG F  KKVSL +   NQ   IP+ PL I ++ ST KE R+IH GLYEVW+ KWKGGL+IH+AFI+ I
Subjt:  AKVGKSGKFISKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
SwissProt top hitse value%identityAlignment
Q949S5 F-box protein PP2-B119.7e-0451.28Show/hide
Query:  RGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVT
        R LNI WG++ RYWH+      R   VAEL  V WLE+T
Subjt:  RGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVT
Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A91.6e-3042.46Show/hide
Query:  HTVADQSAMAKDDKGNITI-YPRGLNITWGNDNRYWHFAK-PYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKV
        H  AD S M +D+     I  P GLN  WG D+RYW   K P MP     AELK VSWLEVT S DK+E GK Y++GF ++    A GW+   V++ AK+
Subjt:  HTVADQSAMAKDDKGNITI-YPRGLNITWGNDNRYWHFAK-PYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKV

Query:  GKSGKFISKKVSLEN------KPRNQKLTIPEEP---LEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        GK GK + K++   +      K  ++ + IP+E     EI V  +   +   + FGLYEVWT +WK GL IH+AF+Q +
Subjt:  GKSGKFISKKVSLEN------KPRNQKLTIPEEP---LEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
Arabidopsis top hitse value%identityAlignment
AT1G10155.1 phloem protein 2-A102.6e-2842.41Show/hide
Query:  PRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKVGKSGKFISKKVSLEN------K
        P GLN  WG D+RYW           + AELK+VSWLEVT S DK+E GK Y++GF ++ ++ A GW+   V++ AK+GK G+ I K++   N      K
Subjt:  PRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKVGKSGKFISKKVSLEN------K

Query:  PRNQKLTIPEEP---LEIKVEASTPKEQRT-IHFGLYEVWTQKWKGGLKIHDAFIQNI
             + IP+E     EI V       Q T + FGLYEVWT KWK GL I++AF++ +
Subjt:  PRNQKLTIPEEP---LEIKVEASTPKEQRT-IHFGLYEVWTQKWKGGLKIHDAFIQNI
AT1G31200.1 phloem protein 2-A91.1e-3142.46Show/hide
Query:  HTVADQSAMAKDDKGNITI-YPRGLNITWGNDNRYWHFAK-PYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKV
        H  AD S M +D+     I  P GLN  WG D+RYW   K P MP     AELK VSWLEVT S DK+E GK Y++GF ++    A GW+   V++ AK+
Subjt:  HTVADQSAMAKDDKGNITI-YPRGLNITWGNDNRYWHFAK-PYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKV

Query:  GKSGKFISKKVSLEN------KPRNQKLTIPEEP---LEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
        GK GK + K++   +      K  ++ + IP+E     EI V  +   +   + FGLYEVWT +WK GL IH+AF+Q +
Subjt:  GKSGKFISKKVSLEN------KPRNQKLTIPEEP---LEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNI
AT1G80110.1 phloem protein 2-B116.9e-0551.28Show/hide
Query:  RGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVT
        R LNI WG++ RYWH+      R   VAEL  V WLE+T
Subjt:  RGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATTGGGCCTCATACAGTAGCAGATCAAAGTGCCATGGCTAAGGATGACAAGGGAAACATCACAATTTATCCTAGAGGATTGAACATCACGTGGGGCAACGATAA
TCGCTATTGGCATTTCGCTAAGCCTTACATGCCTAGAAGTTTAAGTGTGGCAGAGCTGAAGCAAGTGTCATGGCTAGAAGTGACAAGTTCAACTGATAAAATGGAAATTG
GAAAAAAGTACAAAGTGGGATTCAATGTGACATTGAGTTCACATGCATTTGGATGGAATGGGACAAATGTTTATGTAATGGCTAAGGTTGGGAAGTCAGGGAAGTTCATA
TCCAAGAAAGTTTCTCTTGAAAACAAACCAAGAAATCAAAAGCTAACAATCCCTGAGGAGCCATTGGAAATCAAAGTTGAGGCTTCAACACCCAAAGAGCAAAGAACCAT
CCATTTTGGTTTGTATGAAGTTTGGACCCAAAAGTGGAAAGGAGGATTGAAGATTCATGATGCTTTCATTCAAAACATTGCCTAA
mRNA sequenceShow/hide mRNA sequence
AAATTTTATTTGAATAAAACCCTTTAATTCCTTGTTCTTCTTGTGCAATCCCACCTTATAATTATGACAATTGGGCCTCATACAGTAGCAGATCAAAGTGCCATGGCTAA
GGATGACAAGGGAAACATCACAATTTATCCTAGAGGATTGAACATCACGTGGGGCAACGATAATCGCTATTGGCATTTCGCTAAGCCTTACATGCCTAGAAGTTTAAGTG
TGGCAGAGCTGAAGCAAGTGTCATGGCTAGAAGTGACAAGTTCAACTGATAAAATGGAAATTGGAAAAAAGTACAAAGTGGGATTCAATGTGACATTGAGTTCACATGCA
TTTGGATGGAATGGGACAAATGTTTATGTAATGGCTAAGGTTGGGAAGTCAGGGAAGTTCATATCCAAGAAAGTTTCTCTTGAAAACAAACCAAGAAATCAAAAGCTAAC
AATCCCTGAGGAGCCATTGGAAATCAAAGTTGAGGCTTCAACACCCAAAGAGCAAAGAACCATCCATTTTGGTTTGTATGAAGTTTGGACCCAAAAGTGGAAAGGAGGAT
TGAAGATTCATGATGCTTTCATTCAAAACATTGCCTAAACTTTCTCATGTGATTTTGATTATTTTATAATTTTATGCACTTTAAGGTCATGAGATGTTATGTGTGTGTGT
TTTTTTTTGTTGAAGTTCAACAATAGAATGGAGTCGAACTCATAACCTTTTAGTTTATTAATTAGGTATATATTGATGTCGTTGAACTATTGTGTTCTTATTGATTTGAG
A
Protein sequenceShow/hide protein sequence
MTIGPHTVADQSAMAKDDKGNITIYPRGLNITWGNDNRYWHFAKPYMPRSLSVAELKQVSWLEVTSSTDKMEIGKKYKVGFNVTLSSHAFGWNGTNVYVMAKVGKSGKFI
SKKVSLENKPRNQKLTIPEEPLEIKVEASTPKEQRTIHFGLYEVWTQKWKGGLKIHDAFIQNIA