; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015452 (gene) of Chayote v1 genome

Gene IDSed0015452
OrganismSechium edule (Chayote v1)
DescriptionPOU domain, class 6, transcription factor 2-like
Genome locationLG05:36204133..36205645
RNA-Seq ExpressionSed0015452
SyntenySed0015452
Gene Ontology termsNA
InterPro domainsIPR007789 - Protein of unknown function DUF688


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649619.1 hypothetical protein Csa_012837 [Cucumis sativus]6.1e-3667.19Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP
        MD DEFYRQPAAVPFKWEIKPGVP+NH RL   P HSP  H   H+Q+LKPPPAV+HF HP NSLHSS RT+S+RW F RS +    + S GCFP S LP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP

Query:  SRKSSKSANR-TPEPDYSSESETLSRWS
        +RKS KS +R  PEPDYSS+ +TLSRWS
Subjt:  SRKSSKSANR-TPEPDYSSESETLSRWS

XP_004142634.1 uncharacterized protein LOC101220757 [Cucumis sativus]6.1e-3667.19Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP
        MD DEFYRQPAAVPFKWEIKPGVP+NH RL   P HSP  H   H+Q+LKPPPAV+HF HP NSLHSS RT+S+RW F RS +    + S GCFP S LP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP

Query:  SRKSSKSANR-TPEPDYSSESETLSRWS
        +RKS KS +R  PEPDYSS+ +TLSRWS
Subjt:  SRKSSKSANR-TPEPDYSSESETLSRWS

XP_008444194.1 PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo]6.1e-3661.33Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP
        MD DEFYR+PAAVPFKWEIKPGVP+NH R  Q P HSP  H   H+Q+LKPPPAV+HF HPSNSLHSS RTRSDRW F RS +    + S GCFP S LP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP

Query:  SRKSSKSANRT-PEPDYSSESETLSRWS----GIILSFYFSLLTRMPLRF
        +RKS K+ +R  PEPDYSS+ +TLSRWS      I  F +S+ +  P  F
Subjt:  SRKSSKSANRT-PEPDYSSESETLSRWS----GIILSFYFSLLTRMPLRF

XP_022940016.1 uncharacterized protein LOC111445775 [Cucurbita moschata]2.7e-3668.99Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSS
        MDVDEFYRQPAAVPFKWEIKPGVP+NH RL QFP HSPQ H     ++LKPPPAV  T FH  SNSL    RTRSDRW  ++S   EP+ VSVGCF SS 
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSS

Query:  LPSRKSSKSANRTPEPDYSSESETLSRWS
        LP+RK+SK  NR PEPDY+SE ETL RWS
Subjt:  LPSRKSSKSANRTPEPDYSSESETLSRWS

XP_038899347.1 uncharacterized protein LOC120086669 [Benincasa hispida]4.5e-3971.65Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP
        MDVDEFYRQPAAVPFKWEIKPGVPKNH RL   P HS    PP H Q+LKPPP+V++F HPSNSLHSSSRTRSDRW FS     +P+ VS GCFP S LP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP

Query:  SRKSSKSANRTPEPDYSSESETLSRWS
        +RKS+KS +R PEPDYSS  E+LSRWS
Subjt:  SRKSSKSANRTPEPDYSSESETLSRWS

TrEMBL top hitse value%identityAlignment
A0A0A0KY52 Uncharacterized protein2.1e-3463.12Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP
        MD DEFYRQPAAVPFKWEIKPGVP+NH RL   P HSP  H   H+Q+LKPPPAV+HF HP NSLHSS RT+S+RW F RS +    + S GCFP S LP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP

Query:  SRKSSKSANR-TPEPDYSSESETLSRWSGIILSFYFSLLTR
        +RKS KS +R  PEPDYSS+ +TLSR  G   +  F LL R
Subjt:  SRKSSKSANR-TPEPDYSSESETLSRWSGIILSFYFSLLTR

A0A1S3BAM4 uncharacterized protein LOC1034876072.9e-3661.33Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP
        MD DEFYR+PAAVPFKWEIKPGVP+NH R  Q P HSP  H   H+Q+LKPPPAV+HF HPSNSLHSS RTRSDRW F RS +    + S GCFP S LP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLP

Query:  SRKSSKSANRT-PEPDYSSESETLSRWS----GIILSFYFSLLTRMPLRF
        +RKS K+ +R  PEPDYSS+ +TLSRWS      I  F +S+ +  P  F
Subjt:  SRKSSKSANRT-PEPDYSSESETLSRWS----GIILSFYFSLLTRMPLRF

A0A6J1BQH3 uncharacterized protein DKFZp434B061-like4.0e-3364.66Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSN----SLHSSSRTRSDRWPFSRSNRREPDLVS--VGCF
        MD DEFYR+PAAVPFKWEIKPGVP+ H RL       P   PPP  Q+LKPPP V+HF  PS     SLHSSSRTRSDRW F+RS+  EP  VS   GCF
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSN----SLHSSSRTRSDRWPFSRSNRREPDLVS--VGCF

Query:  PSSSLPSRKSSKSANRTPEPDYSSESETLSRWS
        PS S P+RKS KS NR PEP+Y++E ETLSRWS
Subjt:  PSSSLPSRKSSKSANRTPEPDYSSESETLSRWS

A0A6J1FHC7 uncharacterized protein LOC1114457751.3e-3668.99Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSS
        MDVDEFYRQPAAVPFKWEIKPGVP+NH RL QFP HSPQ H     ++LKPPPAV  T FH  SNSL    RTRSDRW  ++S   EP+ VSVGCF SS 
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSS

Query:  LPSRKSSKSANRTPEPDYSSESETLSRWS
        LP+RK+SK  NR PEPDY+SE ETL RWS
Subjt:  LPSRKSSKSANRTPEPDYSSESETLSRWS

A0A6J1ISY3 uncharacterized protein LOC1114803258.0e-3466.67Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSS
        MDVDEFYRQPAAVPFKWEIKPGVP+NH  L  FP HSPQ H     ++LKPPPAV  T FH  SNSL    RTRSDRW  S+S   EP+ VSVGCF SS 
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSS

Query:  LPSRKSSKSANRTPEPDYSSESETLSRWS
        LP+RK++K  NR PEPD +SE ETL RWS
Subjt:  LPSRKSSKSANRTPEPDYSSESETLSRWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21695.1 hydroxyproline-rich glycoprotein family protein1.6e-0540.51Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPG-HSPQLHPPPHKQRLKP------PPAVTHFHHPSNSLHSSSRTR
        +D D+ +++P AVPFKWEI+PGVPK        PG   P L  PP   +L P      PP+ +     S+S  S SR+R
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPG-HSPQLHPPPHKQRLKP------PPAVTHFHHPSNSLHSSSRTR

AT1G77400.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)1.6e-1029.02Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPP------------------------------------------PHK-----QRLKP--
        +DVD+ +++P  +PF WEI+PGVPK   R+ Q PG++  L PP                                          PH       +LKP  
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPP------------------------------------------PHK-----QRLKP--

Query:  -PPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPD----------LVSVGCFPSSSLPSRK------SSKSANRTPEPDYSSESETLSRWS
         P +++ F+ P  S  SS R  S+RW   R NR  P+          +   GCFPS     RK        KS +R+    Y S+ ET+S W+
Subjt:  -PPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPD----------LVSVGCFPSSSLPSRK------SSKSANRTPEPDYSSESETLSRWS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGATGAATTCTACCGGCAACCGGCTGCCGTTCCTTTCAAGTGGGAGATCAAACCCGGCGTCCCCAAGAACCACGACCGGCTCCCCCAGTTTCCCGGTCACTC
TCCTCAACTTCATCCACCGCCGCACAAGCAGAGGCTGAAGCCTCCTCCGGCCGTCACCCATTTCCACCATCCTTCGAACTCCCTTCACTCGTCCTCCCGAACCCGGTCCG
ACCGGTGGCCATTCTCCCGGTCCAACCGCCGCGAACCCGACCTGGTCTCCGTCGGTTGCTTTCCCTCCTCGTCGTTGCCTTCCCGGAAATCGAGCAAGAGCGCGAACCGG
ACACCCGAACCGGATTACAGCTCTGAATCGGAGACTTTGTCGCGATGGTCGGGTATCATTCTTTCGTTTTATTTCTCACTTCTTACAAGAATGCCCTTGAGGTTTTTCCG
ACTAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTGATGAATTCTACCGGCAACCGGCTGCCGTTCCTTTCAAGTGGGAGATCAAACCCGGCGTCCCCAAGAACCACGACCGGCTCCCCCAGTTTCCCGGTCACTC
TCCTCAACTTCATCCACCGCCGCACAAGCAGAGGCTGAAGCCTCCTCCGGCCGTCACCCATTTCCACCATCCTTCGAACTCCCTTCACTCGTCCTCCCGAACCCGGTCCG
ACCGGTGGCCATTCTCCCGGTCCAACCGCCGCGAACCCGACCTGGTCTCCGTCGGTTGCTTTCCCTCCTCGTCGTTGCCTTCCCGGAAATCGAGCAAGAGCGCGAACCGG
ACACCCGAACCGGATTACAGCTCTGAATCGGAGACTTTGTCGCGATGGTCGGGTATCATTCTTTCGTTTTATTTCTCACTTCTTACAAGAATGCCCTTGAGGTTTTTCCG
ACTAAGTTAA
Protein sequenceShow/hide protein sequence
MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANR
TPEPDYSSESETLSRWSGIILSFYFSLLTRMPLRFFRLS