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Sed0015471 (gene) of Chayote v1 genome

Gene IDSed0015471
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:44266427..44266747
RNA-Seq ExpressionSed0015471
SyntenySed0015471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]9.3e-2360.95Show/hide
Query:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW
        KL L+L LVC+AILA S +AR   VA +    + +DFSL  C SF+  AT  +IDV KNA+APHP+CC+AIS L+ CSS+ LKDIPS DM+L+KSICA W
Subjt:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]1.2e-2565.05Show/hide
Query:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL
        +KL LV F VCMAILA S  A T   A S DP   E  SL GCTSF+S AT C+IDV KNA+APHP+CCKA S LN CS + LK IPS+DM+LIK ICAL
Subjt:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL

Query:  WGV
        WGV
Subjt:  WGV

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]1.1e-2867.96Show/hide
Query:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL
        MKL LV FLVC+AILA S  A T  +A + DP   E+FSL GCTSF+S ATNCM+DV KNA+APHP+CCKA S LN CSS+ LK IPS+DM+LIK ICAL
Subjt:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL

Query:  WGV
        WGV
Subjt:  WGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]5.3e-2665.05Show/hide
Query:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL
        +KL LV F VCMAILA S  A T   A S DP   E+ SL GCTSF+S AT C+IDV KNA+APHP+CCKA S LN CS + LK IPS+DM+LIK ICAL
Subjt:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL

Query:  WGV
        WGV
Subjt:  WGV

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]4.5e-2564.76Show/hide
Query:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW
        KL LVL LVC+AILA S +AR   VA +      EDFSL  C SF+  AT C+IDV KNA+APHP+CC+AIS L+ CSS+ LKDIPSSDM+L+KSICA W
Subjt:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein4.5e-2360.95Show/hide
Query:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW
        KL L+L LVC+AILA S +AR   VA +    + +DFSL  C SF+  AT  +IDV KNA+APHP+CC+AIS L+ CSS+ LKDIPS DM+L+KSICA W
Subjt:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

A0A5A7U483 Uncharacterized protein5.7e-2665.05Show/hide
Query:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL
        +KL LV F VCMAILA S  A T   A S DP   E  SL GCTSF+S AT C+IDV KNA+APHP+CCKA S LN CS + LK IPS+DM+LIK ICAL
Subjt:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL

Query:  WGV
        WGV
Subjt:  WGV

A0A5A7U9B0 Uncharacterized protein1.7e-2260Show/hide
Query:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW
        KL LVL  VC+AILA S +A    VA +      EDFSL  C SF+  AT C+IDV KN +APHP+CC+AI+ L+ CSS+ LKDIPS DM+L+KSICA W
Subjt:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

A0A5D3CFS6 Uncharacterized protein2.2e-2564.76Show/hide
Query:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW
        KL LVL LVC+AILA S +AR   VA +      EDFSL  C SF+  AT C+IDV KNA+APHP+CC+AIS L+ CSS+ LKDIPSSDM+L+KSICA W
Subjt:  KLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

A0A5D3CG41 Uncharacterized protein2.6e-2665.05Show/hide
Query:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL
        +KL LV F VCMAILA S  A T   A S DP   E+ SL GCTSF+S AT C+IDV KNA+APHP+CCKA S LN CS + LK IPS+DM+LIK ICAL
Subjt:  MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICAL

Query:  WGV
        WGV
Subjt:  WGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAGCACTAGTATTGTTTCTAGTATGCATGGCTATTTTAGCACCATCCACATCGGCTCGTACAAACGAAGTTGCGGAATCACCCGATCCAATGGTTGTTGAAGA
TTTTTCGTTGTCGGGATGCACATCATTTCTTTCTAATGCGACAAATTGCATGATTGATGTGTTTAAGAATGCGATTGCTCCTCATCCTACTTGTTGCAAAGCCATTTCTG
ACCTCAACCATTGTTCGTCTAAGATTCTCAAAGACATTCCATCTAGTGATATGGTTTTGATTAAGAGCATTTGTGCATTATGGGGGGTTTCAATTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAGCACTAGTATTGTTTCTAGTATGCATGGCTATTTTAGCACCATCCACATCGGCTCGTACAAACGAAGTTGCGGAATCACCCGATCCAATGGTTGTTGAAGA
TTTTTCGTTGTCGGGATGCACATCATTTCTTTCTAATGCGACAAATTGCATGATTGATGTGTTTAAGAATGCGATTGCTCCTCATCCTACTTGTTGCAAAGCCATTTCTG
ACCTCAACCATTGTTCGTCTAAGATTCTCAAAGACATTCCATCTAGTGATATGGTTTTGATTAAGAGCATTTGTGCATTATGGGGGGTTTCAATTTCTTAG
Protein sequenceShow/hide protein sequence
MKLALVLFLVCMAILAPSTSARTNEVAESPDPMVVEDFSLSGCTSFLSNATNCMIDVFKNAIAPHPTCCKAISDLNHCSSKILKDIPSSDMVLIKSICALWGVSIS