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Sed0015487 (gene) of Chayote v1 genome

Gene IDSed0015487
OrganismSechium edule (Chayote v1)
DescriptionMitochondrial ribosomal protein L27
Genome locationLG09:37670174..37672429
RNA-Seq ExpressionSed0015487
SyntenySed0015487
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019034 - Uncharacterised protein family UPF0390


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575705.1 hypothetical protein SDJN03_26344, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3284.95Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK
        MTQKA LFKGQQKRKTIPPNRHGK+P TRKGKR VKPSKTTK+MET+RE+SKFINYCNETKAATLANKEGGQLSIVKT SDAG G+ + +AKK
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK

XP_008461352.1 PREDICTED: uncharacterized protein LOC103499958 [Cucumis melo]7.5e-3281.91Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD
        MTQKANLFKG+QKRKTIPPNRHGK+P TRKGKR+VKPSKTTK+MET+REVSKFINYCNETKAATLANKEGGQLSIVKT ++A N     +AKK+
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD

XP_022145051.1 uncharacterized protein LOC111014568 [Momordica charantia]3.4e-3281.63Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGS----GSGSAKKD
        MTQKAN FKGQQKRKTIPPNRHGKVP TRKGKR+VKPSK TK+MET+RE+SKFINYCNETKAATLANKEGGQLSIVK   DAGN S    G+ SAKK+
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGS----GSGSAKKD

XP_022953341.1 uncharacterized protein LOC111455923 [Cucurbita moschata]9.8e-3283.87Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK
        MTQKA LFKGQQKRKTIPPNRHGK+P TRKGKR VKPSKTTK+MET+RE+SKFINYCNETKAATLANKEGGQLSIVKT SDA  G+ + +AKK
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK

XP_038897231.1 uncharacterized protein LOC120085359 [Benincasa hispida]3.0e-3383.87Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK
        MTQKANLFKGQQKRKTIPPNRHGK+P TRKGKR+VKPSKTTK+MET+REVSKFINYCNETKAATLANKEGGQLSIVKT SD GN +     K+
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK

TrEMBL top hitse value%identityAlignment
A0A1S3CE62 uncharacterized protein LOC1034999583.6e-3281.91Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD
        MTQKANLFKG+QKRKTIPPNRHGK+P TRKGKR+VKPSKTTK+MET+REVSKFINYCNETKAATLANKEGGQLSIVKT ++A N     +AKK+
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD

A0A5A7UV30 Uncharacterized protein3.6e-3281.91Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD
        MTQKANLFKG+QKRKTIPPNRHGK+P TRKGKR+VKPSKTTK+MET+REVSKFINYCNETKAATLANKEGGQLSIVKT ++A N     +AKK+
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD

A0A6J1CV79 uncharacterized protein LOC1110145681.6e-3281.63Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGS----GSGSAKKD
        MTQKAN FKGQQKRKTIPPNRHGKVP TRKGKR+VKPSK TK+MET+RE+SKFINYCNETKAATLANKEGGQLSIVK   DAGN S    G+ SAKK+
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGS----GSGSAKKD

A0A6J1GMQ7 uncharacterized protein LOC1114559234.7e-3283.87Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK
        MTQKA LFKGQQKRKTIPPNRHGK+P TRKGKR VKPSKTTK+MET+RE+SKFINYCNETKAATLANKEGGQLSIVKT SDA  G+ + +AKK
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK

A0A6J1JNC0 uncharacterized protein LOC1114884384.7e-3283.87Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK
        MTQKA LFKGQQKRKTIPPNRHGK+P TRKGKR VKPSKTTK+MET+RE+SKFINYCNETKAATLANKEGGQLSIVKT SDA  G+ + +AKK
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52040.1 unknown protein5.5e-2570Show/hide
Query:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSS
        MTQK+N FKGQQKRKTI PNRHGK   TRKGKR VKP+K TK+M+T+RE++KFIN+CNE KA   A KEGGQL+I+K  S
Subjt:  MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAGAAAGCGAATCTGTTCAAAGGTCAACAGAAGAGGAAAACCATTCCTCCCAATCGCCATGGAAAAGTTCCCCTCACTCGTAAAGGGAAAAGATATGTGAAGCC
ATCAAAGACCACCAAAGACATGGAAACAGAACGGGAAGTGAGCAAGTTCATAAACTACTGCAATGAGACAAAGGCTGCTACTTTAGCCAACAAGGAAGGTGGGCAGCTGA
GTATTGTAAAAACATCATCAGATGCTGGTAATGGCAGTGGCAGTGGCAGTGCAAAGAAAGATTAG
mRNA sequenceShow/hide mRNA sequence
CAAACCAAAAAATAAAATGAAAAATTTGGGGGCATAAATAAGAGGATTCGGGTCCTCTGCTCTGTTCATCTCATAAACCCTAACCCTAATCGGCAGGAAAAAATCGGAGA
AGATGACTCAGAAAGCGAATCTGTTCAAAGGTCAACAGAAGAGGAAAACCATTCCTCCCAATCGCCATGGAAAAGTTCCCCTCACTCGTAAAGGGAAAAGATATGTGAAG
CCATCAAAGACCACCAAAGACATGGAAACAGAACGGGAAGTGAGCAAGTTCATAAACTACTGCAATGAGACAAAGGCTGCTACTTTAGCCAACAAGGAAGGTGGGCAGCT
GAGTATTGTAAAAACATCATCAGATGCTGGTAATGGCAGTGGCAGTGGCAGTGCAAAGAAAGATTAGAGTATTCTGATTCGTGACAAAGTGTGAAATTATTTGTGATATC
GTTTTTTTAATCTATTTGAAAGAGGCTGTCAGGTTGTATGCCTTAGATCACATTTCACAATTTTGGTAGGAGTAATATTACTTATTTACATGTGTATTTTGGTTTTTGTT
TCCGACGAATGATTTTGCTCCCCTCAAGGTCCGAGGTTTGAGACTCACGTATGACATTACTCTTTCGATGTCTTCGGTGCCTGACCTACGGCGTGGTGGTTGCCTTGTTT
AAAAAAAAATGATTATGGAAGATTTCAAGATGGAATGGAATTTGCAAAATGTGAAGTACTGTCGATAGAATTATCAAGTGGGTATGTTAGCTTTGATCAATAATTATTGC
ACACATTTGAATTCATGGTCATTTTAAAACAGAACTATGTTTCTGAAAACTTGCATTGTTTATAGTTTTTTAAATTTTTGCTTCATAAATGTAGACAATAAAACAAAAAT
AAATAAATAAATAGATCG
Protein sequenceShow/hide protein sequence
MTQKANLFKGQQKRKTIPPNRHGKVPLTRKGKRYVKPSKTTKDMETEREVSKFINYCNETKAATLANKEGGQLSIVKTSSDAGNGSGSGSAKKD