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Sed0015541 (gene) of Chayote v1 genome

Gene IDSed0015541
OrganismSechium edule (Chayote v1)
Descriptionselenoprotein F-like
Genome locationLG09:3695483..3710017
RNA-Seq ExpressionSed0015541
SyntenySed0015541
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7787.72Show/hide
Query:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQL T VK P T       AAAI+ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

KAG7025384.1 Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma]1.6e-7787.72Show/hide
Query:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQL T VK P T       AAAI+ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_008460012.1 PREDICTED: 15 kDa selenoprotein [Cucumis melo]1.0e-7687.13Show/hide
Query:  MQLLTGVKFPFT------AAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQLL GV  P T      AAAAI+ I+SMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFT------AAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KD+FPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_023513576.1 selenoprotein F-like [Cucurbita pepo subsp. pepo]3.5e-7787.13Show/hide
Query:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQ+ T VK P T       AAAI+ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]1.4e-7888.3Show/hide
Query:  MQLLTGVKFPFT------AAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQLL GV+ P T      AA  ++ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFT------AAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A1S3CC00 15 kDa selenoprotein5.0e-7787.13Show/hide
Query:  MQLLTGVKFPFT------AAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQLL GV  P T      AAAAI+ I+SMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFT------AAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KD+FPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1GQK6 selenoprotein F-like5.0e-7788.76Show/hide
Query:  MQLLTGVKFP---FTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLV
        MQLLTGVK P    T A AI+ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMRKLV
Subjt:  MQLLTGVKFP---FTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLV

Query:  FYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI
        FYPEIVGFIEEEKD+FPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  FYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI

A0A6J1HA08 selenoprotein F-like6.5e-7786.55Show/hide
Query:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQL   VK P T       AAAI+ +ASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1JXH9 selenoprotein F-like5.5e-7688.17Show/hide
Query:  MQLLTGVKFP---FTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLV
        MQLLTGVK P    T A AI+ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMRKLV
Subjt:  MQLLTGVKFP---FTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLV

Query:  FYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI
        FYPEIVGFIEEEK +FPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  FYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI

A0A6J1KPJ2 selenoprotein F-like6.5e-7787.13Show/hide
Query:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR
        MQL   VK P T        AAI+ IASMPL WS EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAV+EVCMR
Subjt:  MQLLTGVKFPFTA------AAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F1.3e-1837.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA++EVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

A8YXY3 Selenoprotein F2.0e-1936.73Show/hide
Query:  LLIASMPLTWST--EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FP
        LL+A++  T S    + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA++EVC  KL  +P++  F+  +K K F 
Subjt:  LLIASMPLTWST--EQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FP

Query:  SVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKR
         ++++Y+  S P L LLDD G   E + I  W  + + +FL EK++R
Subjt:  SVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKR

O60613 Selenoprotein F5.9e-1937.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA++EVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q802F3 Selenoprotein F1.3e-1837.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA++EVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q923V8 Selenoprotein F1.5e-1736.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA++EVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein6.6e-6673.25Show/hide
Query:  KFPFTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIE
        K    +A  IL++AS     + EQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELVSDCLKCC +DS+D+ SK+TYSGA++EVCMRKLVFYPEIVGFIE
Subjt:  KFPFTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIE

Query:  EEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA
        EEK+KFPSVKVQYIFNSPPKLI+LD++G+HKESIRIDNWKREH+LQ+++EKVK ++A
Subjt:  EEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTCTCACCGGCGTAAAGTTTCCGTTCACGGCGGCGGCAGCTATACTTTTGATCGCGTCAATGCCGCTGACTTGGTCAACGGAGCAGCTCAGCTCGAGGGAATG
TGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGTCGGATTGTTTGAAGTGTTGCACGGAGG
ATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTTGTGGAGGTCTGCATGAGGAAGCTAGTTTTCTACCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAG
GATAAGTTCCCTTCCGTTAAGGTTCAATATATATTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATCGACAATTGGAA
ACGTGAACATATTTTGCAGTTTCTGCAAGAGAAGGTTAAGCGTTCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATAAATTATAAAAGTAACGAAAATTAATAATTTCTACGGAATTGGGTTTTTCCAGTCAGTTTTCTGGTCGTCACTGAAGTTTGCATCTTCACCCACAATCGGCGGCGAAC
ACAGAGATGCAGCTTCTCACCGGCGTAAAGTTTCCGTTCACGGCGGCGGCAGCTATACTTTTGATCGCGTCAATGCCGCTGACTTGGTCAACGGAGCAGCTCAGCTCGAG
GGAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGTCGGATTGTTTGAAGTGTTGCA
CGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTTGTGGAGGTCTGCATGAGGAAGCTAGTTTTCTACCCTGAAATTGTTGGCTTCATTGAAGAA
GAAAAGGATAAGTTCCCTTCCGTTAAGGTTCAATATATATTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATCGACAA
TTGGAAACGTGAACATATTTTGCAGTTTCTGCAAGAGAAGGTTAAGCGTTCTTCAGCAATTTAAGGTTTTCTTTTTATAATCTCTGTAAAAAAAACATATTTGAAAAGAG
AATCTCTGTAAAAAAAACATATTTGAATAGAGAATTGATGTATTATGTATACCCACCACCTGTTTGTGAGGATCTCTCTAAACTGTTTTCAACTTGATTAGGAAAGGTTG
GGGAAGAAGATAAAAGAAGGGAGAGAGAGAGA
Protein sequenceShow/hide protein sequence
MQLLTGVKFPFTAAAAILLIASMPLTWSTEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVVEVCMRKLVFYPEIVGFIEEEK
DKFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI