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Sed0015550 (gene) of Chayote v1 genome

Gene IDSed0015550
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:31974142..31974881
RNA-Seq ExpressionSed0015550
SyntenySed0015550
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579243.1 hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4061.15Show/hide
Query:  IRSISSARSPPF--------------RRRAALSVTAASR--DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDS
        ++SISSA S PF              RR    +V A+SR  D N+NNNN+ ++YASGKLVDESMI LR RIH+IKM E+SH PP + LDWEKRCY DYDS
Subjt:  IRSISSARSPPF--------------RRRAALSVTAASR--DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDS

Query:  HVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS
        H+CEALGYLQSHLMNTRPS+   +L L+TLSVP+SS V+LHRF  IAA LLA   L+
Subjt:  HVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS

KAG7016757.1 hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3963.95Show/hide
Query:  HPIRSISSARSPPFRRRAALSVTAASR----DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYLQ
        HPI S SS R    RR    +V A+SR    + N+NNNN+ ++YASGKLVDESMI LR RIH+IKM E+SH PP + LDWEKRCY DYDSH+CEALGYLQ
Subjt:  HPIRSISSARSPPFRRRAALSVTAASR----DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYLQ

Query:  SHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS
        SHLMNTRPS+   +L L+TLSVP+SS V+LHRF  IAA LLA   L+
Subjt:  SHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS

XP_022939420.1 uncharacterized protein LOC111445338 [Cucurbita moschata]5.8e-3959.74Show/hide
Query:  IRSISSARSPPF-------------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVC
        ++SISSA S PF             RR    +V A+SR  ++N++N+ ++YASGKLVDESMI LR RIH+IKM E+SH PP + LDWEKRCY DYDSH+C
Subjt:  IRSISSARSPPF-------------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVC

Query:  EALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS
        EALGYLQSHLMNTRPS+   +L L+TLSVP+SS V+LHRF  IAA LLA   L+
Subjt:  EALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS

XP_022993164.1 uncharacterized protein LOC111489262 [Cucurbita maxima]2.6e-3960.9Show/hide
Query:  IRSISSARSPPF-------------RRRAALSVTAASR--DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSH
        ++SISSA S PF             RR    +V A+SR  D +++NNN+ ++YASGKLVDESMI LR RIH+IKM EQSH PP + LDWEKRCY DYDSH
Subjt:  IRSISSARSPPF-------------RRRAALSVTAASR--DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSH

Query:  VCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS
        +CEALGYLQSHLMNTRPS+   +L L+TLSVP+SS V+LHRF  IAA LLA   L+
Subjt:  VCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS

XP_038875502.1 uncharacterized protein LOC120067929 [Benincasa hispida]7.6e-3962.99Show/hide
Query:  MNSIHPI-RSISSARSPPF-----------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDY
        M SI+ + RSISS  S PF           R   A++VTA+SR   + NNN  ++YASGK+VDESMI LR RIH+IKMAEQSH PP + LDWEKR Y DY
Subjt:  MNSIHPI-RSISSARSPPF-----------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDY

Query:  DSHVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLA
        DSH+CEALGYLQ+HLMNTRPS+   ML L+TLSVP SS ++LHRFFQIAA LLA
Subjt:  DSHVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLA

TrEMBL top hitse value%identityAlignment
A0A6J1DHC5 uncharacterized protein LOC1110200631.9e-3560.27Show/hide
Query:  NSIHPIRSISSARSPPFRRRAAL--SVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYL
        +S + +R + S+     RRR  L   VTA+SR    +N+   +HYASGKLV+ESMI LR RIH++KMAE+   PP + L+WEKR Y DYDSHVCEALGYL
Subjt:  NSIHPIRSISSARSPPFRRRAAL--SVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYL

Query:  QSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAH
        QSHLMNTRPS+  A L LLTLSVP+SS ++LHRFF IAA LLA  H
Subjt:  QSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAH

A0A6J1FMN3 uncharacterized protein LOC1114453382.8e-3959.74Show/hide
Query:  IRSISSARSPPF-------------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVC
        ++SISSA S PF             RR    +V A+SR  ++N++N+ ++YASGKLVDESMI LR RIH+IKM E+SH PP + LDWEKRCY DYDSH+C
Subjt:  IRSISSARSPPF-------------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVC

Query:  EALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS
        EALGYLQSHLMNTRPS+   +L L+TLSVP+SS V+LHRF  IAA LLA   L+
Subjt:  EALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS

A0A6J1GM73 uncharacterized protein LOC1114552468.4e-3657.86Show/hide
Query:  MNSIHPIRSISSARSPPF-------------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPD
        MNSI+ + SI S  S P              RR  A +VTA+S+     ++N   +YA GKLVDESMI LR RIH+IK AEQ+H+PP +  DWEKRCY +
Subjt:  MNSIHPIRSISSARSPPF-------------RRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPD

Query:  YDSHVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHL
        YDS++CEALGYLQSHLMNTRPS+   MLALLTLSVP+SS VVLHRF +IA  LLA   L
Subjt:  YDSHVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHL

A0A6J1JRY7 uncharacterized protein LOC1114870168.4e-3659.12Show/hide
Query:  MNSIHPIRSISSARSPPF-----------RRR--AALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPD
        MNSI+ + SI S  S P            RRR   A +VTA+SR     ++N   +YA GKLVDESMI LR RIH+IK AEQ+H+PP +  DWEKRCY +
Subjt:  MNSIHPIRSISSARSPPF-----------RRR--AALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPD

Query:  YDSHVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHL
        YDS++CEALGYLQSHLMNTRPS+   MLALLTLSVP+SS VVLHRF +IA  LLA   L
Subjt:  YDSHVCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHL

A0A6J1JZG1 uncharacterized protein LOC1114892621.3e-3960.9Show/hide
Query:  IRSISSARSPPF-------------RRRAALSVTAASR--DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSH
        ++SISSA S PF             RR    +V A+SR  D +++NNN+ ++YASGKLVDESMI LR RIH+IKM EQSH PP + LDWEKRCY DYDSH
Subjt:  IRSISSARSPPF-------------RRRAALSVTAASR--DDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSH

Query:  VCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS
        +CEALGYLQSHLMNTRPS+   +L L+TLSVP+SS V+LHRF  IAA LLA   L+
Subjt:  VCEALGYLQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein4.9e-2039.44Show/hide
Query:  HPIRSISSARSPPFRRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYLQSHLM
        HP+R+     +   RRR     T    D          +Y  G+ VDE+M+ LR RIH++KM E++  PP + + WEKR Y +YD+ +C+AL  LQ+ LM
Subjt:  HPIRSISSARSPPFRRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYLQSHLM

Query:  NTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHL
        N+RPS+ F    LL +SVP+SS V   R   +A  LL   H+
Subjt:  NTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHL

AT2G01300.1 unknown protein2.5e-2442.47Show/hide
Query:  SIHPIR----SISSARSPPFRRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGY
        SI P+R     +S     P +++  + V+AA+      ++   H+Y  G+LVDE+MI LR RIH++KM E+++ PP + +DWEKR Y  YDS +C+++G 
Subjt:  SIHPIR----SISSARSPPFRRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGY

Query:  LQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARA
        LQS LMN+RP++  A L  L +SVP+SSTV+  R   +   LLA A
Subjt:  LQSHLMNTRPSLVFAMLALLTLSVPISSTVVLHRFFQIAAVLLARA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCATTCATCCCATCCGTTCAATCTCCTCCGCCCGCTCCCCTCCCTTCCGCCGCCGTGCAGCCCTCAGCGTCACGGCGGCGTCACGAGACGACAACAACAACAA
CAACAACGACAGACATCACTACGCGAGCGGAAAGCTCGTGGACGAGAGCATGATCGACCTCCGATTGCGAATCCACAAGATCAAAATGGCCGAACAGAGCCACAATCCGC
CCGTCAATGCCCTCGATTGGGAGAAGCGTTGCTACCCCGATTACGATTCGCACGTCTGCGAGGCCTTGGGCTACCTTCAATCGCACTTGATGAACACCCGCCCTAGCCTC
GTCTTCGCAATGCTCGCTCTCCTTACGCTCAGCGTTCCGATCTCCTCCACCGTCGTCCTCCACCGCTTCTTCCAGATTGCTGCCGTGCTTCTCGCTCGAGCCCATCTCAG
TTGA
mRNA sequenceShow/hide mRNA sequence
TAAAATCACACCCATTTTTCCAACCATATGAATTCCATTCATCCCATCCGTTCAATCTCCTCCGCCCGCTCCCCTCCCTTCCGCCGCCGTGCAGCCCTCAGCGTCACGGC
GGCGTCACGAGACGACAACAACAACAACAACAACGACAGACATCACTACGCGAGCGGAAAGCTCGTGGACGAGAGCATGATCGACCTCCGATTGCGAATCCACAAGATCA
AAATGGCCGAACAGAGCCACAATCCGCCCGTCAATGCCCTCGATTGGGAGAAGCGTTGCTACCCCGATTACGATTCGCACGTCTGCGAGGCCTTGGGCTACCTTCAATCG
CACTTGATGAACACCCGCCCTAGCCTCGTCTTCGCAATGCTCGCTCTCCTTACGCTCAGCGTTCCGATCTCCTCCACCGTCGTCCTCCACCGCTTCTTCCAGATTGCTGC
CGTGCTTCTCGCTCGAGCCCATCTCAGTTGACGGTATTAGAAAGTGTCGACATTCATCTCAAATATAATTGGTATTGCGAGAGGACATGTGGTCTATACTTTAGTACCAA
TCTTGATTTTTATTAGATGTTATATTCATTTAGATTTAATATCTTCAATACCATATTGTTTTTGTTTTTATCTTTAATACCATAGATAATCAGGACAAATATGTTGTATA
AAAAAAACAGGACAATTATGTTTTTCTTTATGACATTATTTTAAAATGAATTTTAGTTCTTTTTCTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MNSIHPIRSISSARSPPFRRRAALSVTAASRDDNNNNNNDRHHYASGKLVDESMIDLRLRIHKIKMAEQSHNPPVNALDWEKRCYPDYDSHVCEALGYLQSHLMNTRPSL
VFAMLALLTLSVPISSTVVLHRFFQIAAVLLARAHLS