CuGenDBv2

Gene ID	Sed0015554
Organism	Sechium edule (Chayote v1)
Description	Multidrug resistance protein ABC transporter family protein, putative
Genome location	LG09:37060295..37061541
RNA-Seq Expression	Sed0015554
Synteny	Sed0015554
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575773.1 hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sororia]

7.0e-69

73.98

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS
        MGNVTSVS VGKVVLS+GS+ EFNEPLT AELMLEHPR VVVE+RSS +A K+P PLP D KLDLKKVYMMLPIRGGKP SLSSEEIRRV+LC N+ALRS
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS

Query:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
         SL LSSSKVLPW AR    T  TMTGA  V++KKED      G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTIKEKK EKK SHWLF F
Subjt:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

XP_008451489.1 PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]

7.0e-69

74.62

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Query:  MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALR
        MGNVTS VS VGKVVLS+GS+QEFNEP T AELMLEHPRQVVVEI +S+V GK+P PLP DEKL+  KVYMMLPIRGGKP SLSSE+IRRVLLC N+ALR
Subjt:  MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALR

Query:  SPSLFLSSSKVLPWFARTC---KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
        S SL LSSSKVLPWFAR C    T   T T   R EIKKE + ++ EG+EV W  E  EGRPEYLSRQLSGRGWKP+LDTIKEKK+EKK SHWLFNF
Subjt:  SPSLFLSSSKVLPWFARTC---KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

XP_022152205.1 uncharacterized protein LOC111019977 [Momordica charantia]

2.8e-70

76.17

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSP
        MGN TS S  GKVVLSDGSVQE NE LTAAELMLEHPRQVVVEI S++AGK+P  LP DEKLDLKKVY+MLPIRGGKP SLSSEEIRR+LLC N+ LR  
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSP

Query:  SLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
        SLF SSSKVLPWFAR C TT AT  G A V++KK D NME  G+E  WE EM  EGRPEYLSRQ SGRGWKP+LDTIKEKK EKK SHWLF F
Subjt:  SLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

XP_022953412.1 uncharacterized protein LOC111455974 [Cucurbita moschata]

3.5e-68

73.47

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS
        MGNVTSVS VGK+VLSDGS+ EFNEPLT AELMLEHPR VVVE+RSS V  K+P PLP D KLDLKKVYMMLPIRGGKP SLSSEEIRRV+LC N+ALRS
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS

Query:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
         SL LSSSKVLPW AR    T  T TGA  V++KK+D  M   G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTIKEKK EKK SHWLF F
Subjt:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

XP_038899617.1 uncharacterized protein LOC120086875 [Benincasa hispida]

8.3e-70

75.26

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS
        MGNVT VS +G+VVLSDGS+Q+FNEP TAAELMLEHPRQVVVEI +S++  K+  PLP DEKLD KKVYMMLPIRGGKP SLSSEEIRRVLLC N+ALRS
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS

Query:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
         SL LSSSKVLPWFAR   +   T T   +VEIKKED  ++ EG+E  WE EM  EGRPEYLSRQLSGRGWKP+LDTIKEKK EKKYSHWLFNF
Subjt:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6C6 Uncharacterized protein

3.8e-68

73.6

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Query:  MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALR
        MGNVTS VS VGKVVLS+GS+QEFNEP T AELMLEHPRQVVVEI +S+V GK+P PLP DEKL+  KVYMMLPIRGGKP SLSSE+IRRVLLC N+ALR
Subjt:  MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALR

Query:  SPSLFLSSSKVLPWFARTC---KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
        S SL LSSSKVLPWFAR C    TT +T T   R + KKE + ++ EG+EV W  E +EGRPEYLSRQLSGRGWKP+LDTIKEKK EKK SHWLF F
Subjt:  SPSLFLSSSKVLPWFARTC---KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

A0A1S3BSP6 uncharacterized protein LOC103492763

3.4e-69

74.62

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Query:  MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALR
        MGNVTS VS VGKVVLS+GS+QEFNEP T AELMLEHPRQVVVEI +S+V GK+P PLP DEKL+  KVYMMLPIRGGKP SLSSE+IRRVLLC N+ALR
Subjt:  MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALR

Query:  SPSLFLSSSKVLPWFARTC---KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
        S SL LSSSKVLPWFAR C    T   T T   R EIKKE + ++ EG+EV W  E  EGRPEYLSRQLSGRGWKP+LDTIKEKK+EKK SHWLFNF
Subjt:  SPSLFLSSSKVLPWFARTC---KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

A0A6J1DD99 uncharacterized protein LOC111019977

1.4e-70

76.17

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSP
        MGN TS S  GKVVLSDGSVQE NE LTAAELMLEHPRQVVVEI S++AGK+P  LP DEKLDLKKVY+MLPIRGGKP SLSSEEIRR+LLC N+ LR  
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSP

Query:  SLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
        SLF SSSKVLPWFAR C TT AT  G A V++KK D NME  G+E  WE EM  EGRPEYLSRQ SGRGWKP+LDTIKEKK EKK SHWLF F
Subjt:  SLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

A0A6J1GN59 uncharacterized protein LOC111455974

1.7e-68

73.47

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS
        MGNVTSVS VGK+VLSDGS+ EFNEPLT AELMLEHPR VVVE+RSS V  K+P PLP D KLDLKKVYMMLPIRGGKP SLSSEEIRRV+LC N+ALRS
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS

Query:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
         SL LSSSKVLPW AR    T  T TGA  V++KK+D  M   G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTIKEKK EKK SHWLF F
Subjt:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

A0A6J1JQZ4 uncharacterized protein LOC111488113

1.2e-66

73.47

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Query:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS
        MGNVTSVS VGKVVLSDGS+ EFNEPLT AELMLEHPR VVVE+RSS VA K+P PLP D KLDLKKVYMMLPIRGGKP SLSSEEIR VLLC N+ALRS
Subjt:  MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRS

Query:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF
         SL LSSSKVLPW AR    T    TGA  V++KK+D      G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTIKEKK EKK SHWLF F
Subjt:  PSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G03280.1 unknown protein

2.3e-09

30.73

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Query:  NVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLK--KVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSP
        N TS S + KV+L DG V++ + P  AAELM+E P   +V+ +S   G+K IPL  D+ LDL    VY+  P+      + +S+  R             
Subjt:  NVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLK--KVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSP

Query:  SLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDN-NMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKE
         L+L+  K         +T N    G  RV  + EDN ++   G +++ E        E++ R    +  KP L+TI E
Subjt:  SLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDN-NMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKE

AT4G02090.1 unknown protein

9.2e-27

40.67

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Query:  MGNVTSVSRV-------GKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS---------VAGKKPIPLPTDEKLDLKKVYMMLPIR--GGKPRS--
        MGNV    ++       GKVVLSDG VQ   E  T AE+MLE+P+ VVVE   S            +K  PLP D+ L+  K+Y++LP +  GG+     
Subjt:  MGNVTSVSRV-------GKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS---------VAGKKPIPLPTDEKLDLKKVYMMLPIR--GGKPRS--

Query:  ---LSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWF-ARTCKTTN-ATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDT
           L+SEE+R++L      +RS   F     +LPWF  R+ K  N AT T  A   + + +  ME             E RPE+LSRQLSGRGWKP+LD 
Subjt:  ---LSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWF-ARTCKTTN-ATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDT

Query:  IKEKKMEKK
        I+EKK +KK
Subjt:  IKEKKMEKK

Sequences

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CDS sequence

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ATGGGCAACGTCACCTCCGTCTCTCGTGTCGGGAAAGTTGTTCTGTCTGACGGTTCTGTTCAGGAGTTCAATGAGCCATTGACGGCGGCCGAGTTGATGCTCGAACACCC
ACGACAAGTAGTCGTAGAGATACGCTCGAGTGTTGCTGGAAAAAAACCGATCCCATTACCAACTGACGAGAAACTCGATTTGAAGAAGGTCTATATGATGCTACCGATAA
GAGGAGGCAAGCCAAGATCATTGTCATCGGAGGAAATCCGTCGTGTTCTCCTATGTGTCAACACGGCTTTACGATCGCCCTCTCTCTTCCTATCTTCTTCTAAGGTTCTT
CCTTGGTTTGCAAGGACATGCAAAACAACGAATGCGACGATGACGGGAGCAGCCCGAGTCGAGATTAAGAAGGAAGATAATAATATGGAGAATGAAGGAGATGAAGTTAG
CTGGGAAATGGAGATGTTGGAGGGGAGGCCAGAGTATTTAAGCAGACAATTATCAGGCAGAGGTTGGAAGCCAAATTTAGATACTATTAAGGAAAAGAAAATGGAGAAGA
AATATTCTCATTGGTTGTTCAACTTTTGA

mRNA sequence

Show/hide mRNA sequence

ATTCATTACCATGGAGCTGTTCAACAAACAAACTCCTTCCCTCTATCCCCTCTTCTTATTTCATTCCTTCCTTTCTCCTCCCTCAACCTCACTTTGATAATTTCTCGATG
GGCAACGTCACCTCCGTCTCTCGTGTCGGGAAAGTTGTTCTGTCTGACGGTTCTGTTCAGGAGTTCAATGAGCCATTGACGGCGGCCGAGTTGATGCTCGAACACCCACG
ACAAGTAGTCGTAGAGATACGCTCGAGTGTTGCTGGAAAAAAACCGATCCCATTACCAACTGACGAGAAACTCGATTTGAAGAAGGTCTATATGATGCTACCGATAAGAG
GAGGCAAGCCAAGATCATTGTCATCGGAGGAAATCCGTCGTGTTCTCCTATGTGTCAACACGGCTTTACGATCGCCCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCT
TGGTTTGCAAGGACATGCAAAACAACGAATGCGACGATGACGGGAGCAGCCCGAGTCGAGATTAAGAAGGAAGATAATAATATGGAGAATGAAGGAGATGAAGTTAGCTG
GGAAATGGAGATGTTGGAGGGGAGGCCAGAGTATTTAAGCAGACAATTATCAGGCAGAGGTTGGAAGCCAAATTTAGATACTATTAAGGAAAAGAAAATGGAGAAGAAAT
ATTCTCATTGGTTGTTCAACTTTTGAAAGGCTCAAATATTATTAAAGTATATGTGCAAAAATATAGATGATATTGAATGTTTAAGAACATGCTTTTGTATTTGTAAAAAA
GAAAAAAATTATAGTTGAAATATCATATGGTATCCACCTATTAAAA

Protein sequence

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MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVL
PWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

Sed0015554 (gene) of Chayote v1 genome