CuGenDBv2

Gene ID	Sed0015603
Organism	Sechium edule (Chayote v1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103483850
Genome location	LG02:48812772..48814007
RNA-Seq Expression	Sed0015603
Synteny	Sed0015603
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134216.1 uncharacterized protein LOC101205160 [Cucumis sativus]

4.0e-46

84.87

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPH +LLAVVV +VIVVPFLLGDQGEALT AISDLLSPFGLLLLP+LLLL I FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

XP_022137815.1 uncharacterized protein LOC111009160 [Momordica charantia]

5.2e-46

84.03

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPHG+LLAVVV VVIVVPF+ GDQGEA+T AISDLLSPFGLLLLP++LLLAI FLSSDR S ++AIFS+GEPDSIHRVTGSP+GVALFLLL+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

XP_022937994.1 uncharacterized protein LOC111444213 [Cucurbita moschata]

1.3e-44

85.71

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPHGVLLAVVV +VIV PFLLGD GEALT AISDLLSPFGLLLLP+LLLLAI FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

XP_023528270.1 uncharacterized protein LOC111791239 [Cucurbita pepo subsp. pepo]

1.7e-44

81.51

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPHGV+LAVVV  VI+VPF LGD GEA+T AISDLLSPFGLLLLP+LLLL I FLSSDR S+++AIFS+ EPDSIHRVTGSP+GVALFLLL+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

XP_038899735.1 uncharacterized protein LOC120086972 [Benincasa hispida]

1.5e-45

84.03

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPH +LLAVVV +VIVVPFLLGDQGEALT AISDLLSP GLLLLP+LLLL I FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5U0 Uncharacterized protein

1.9e-46

84.87

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPH +LLAVVV +VIVVPFLLGDQGEALT AISDLLSPFGLLLLP+LLLL I FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

A0A1S3AY58 LOW QUALITY PROTEIN: uncharacterized protein LOC103483850

1.9e-46

84.87

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPH +LLAVVV +VIVVPFLLGDQGEALT AISDLLSPFGLLLLP+LLLL I FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

A0A5A7U157 Uncharacterized protein

1.9e-46

84.87

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPH +LLAVVV +VIVVPFLLGDQGEALT AISDLLSPFGLLLLP+LLLL I FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

A0A6J1C7Q9 uncharacterized protein LOC111009160

2.5e-46

84.03

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPHG+LLAVVV VVIVVPF+ GDQGEA+T AISDLLSPFGLLLLP++LLLAI FLSSDR S ++AIFS+GEPDSIHRVTGSP+GVALFLLL+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

A0A6J1I8A7 uncharacterized protein LOC111472294

6.2e-45

85.71

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL
        MIEERQGGAPHGVLLAVVV +VIV PFLLGD GEALT AISDLLSPFGLLLLP+LLLLAI FLSSDR S ++AIFSSGEPDSIHRVTGSP+GVALFL+L+
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLL

Query:  LFLLYHRISLFGADDDSGD
        LFLLY+RIS+FG DDDSGD
Subjt:  LFLLYHRISLFGADDDSGD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31940.1 unknown protein

2.8e-05

32.43

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Query:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLL--PLLLLLAIHFLSSDR--ASILNAIFSSGEPDSIHRVTGSPLGVALF
        M  +++G  P  V L + V V+I++ F+      +    I      F L L+  PLLLLLA+HFLS D+    ++ ++    E +S++R  G+P GVA  
Subjt:  MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLL--PLLLLLAIHFLSSDR--ASILNAIFSSGEPDSIHRVTGSPLGVALF

Query:  LLLLLFLLYHR
        L+ L F++ ++
Subjt:  LLLLLFLLYHR

AT3G06890.1 unknown protein

1.5e-38

68.14

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Query:  GGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLLLFLLYH
        G APHG++LAVVV +V++VPF +GD GEA+T AI++LLSP GLLLLP++LLL I FLSS+R S ++AIFS+GEP+SIHRV+GSP+GVALFL+L+LFLLY+
Subjt:  GGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLLLFLLYH

Query:  RISLFGADDDSGD
        R S+FG DD S D
Subjt:  RISLFGADDDSGD

Sequences

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CDS sequence

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ATGATAGAAGAACGGCAAGGCGGAGCTCCCCACGGAGTACTACTGGCGGTGGTGGTGGTGGTCGTGATCGTGGTCCCGTTCCTCCTCGGCGACCAGGGCGAGGCTCTGAC
CGCCGCCATCTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCGCCATCCACTTCCTCTCCTCCGACCGCGCCTCCATCCTCAACGCCA
TCTTCTCCTCCGGCGAGCCCGACTCCATCCACCGCGTCACCGGATCCCCCCTCGGCGTCGCCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCTACCACCGCATCTCCCTC
TTCGGCGCCGACGACGATTCCGGCGACTGA

mRNA sequence

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TACTATTAACGAGAGACTTGACCACACCAGATAAGGCCCCTTTTTTTTTTGTTATCTGCTCATCCGTCCTGTCAGATTAGAAAAAACAATAATAATAAATAAAAGTAAAA
AAACCACTCTTTCGCTCACGACTTTTGAAACCAATCCCCTTCACTTTCCTCTCATTACTTGAAACCAAAAAAAAAAAAAAAAATGATAGAAGAACGGCAAGGCGGAGCTC
CCCACGGAGTACTACTGGCGGTGGTGGTGGTGGTCGTGATCGTGGTCCCGTTCCTCCTCGGCGACCAGGGCGAGGCTCTGACCGCCGCCATCTCCGACCTCCTCAGCCCC
TTCGGCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCGCCATCCACTTCCTCTCCTCCGACCGCGCCTCCATCCTCAACGCCATCTTCTCCTCCGGCGAGCCCGACTCCAT
CCACCGCGTCACCGGATCCCCCCTCGGCGTCGCCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCTACCACCGCATCTCCCTCTTCGGCGCCGACGACGATTCCGGCGACT
GACCTCCACTGTTAGATCTCTCCCCATTACTTTCCGCGTTTTCATTTTTGCTTTTCTCTGTAAAGCTTTTTGGTCTATCGGTCTGTGAGTTTTACATTTATGCCCCTGAG
TGGCTTGGCCCTGCGATTGGTCCGCTTTGGAGTAATGAAATATCGTAATTGCGCTTCCTGGCTTTCTTTCTTGCTTTTACTTGTTCATTGGTTTTTGCGTCCTTTTCGTT
GAGGGCATTTCTGTCATTTTACATCCCCTGAAAAAGTTGCTCGTTCGTTGTCGGTTTGACTGTGGTGGAAATGGTAGGTGTGAGCTGAGACAAGACACCGGCGGCGGCGG
CGGCCGGTAGTTATTCCGATTTAAACATATTTATATTTATTTAAGTTGTTATTGAATCAGATTTGTGCATGGAAATATTAAAAGAATGAAGTGAGATCAGATCTGGGTCT
AGTTTTTTTTTAAATGTATTATTAGTTGGAGTTTGTTATTGAAGCTAAGATCGTCGGAGGTCGAACAGCGACGGCTGGCACGGCGTCGATGGCTGCCGGCGCGTGTCGGA
GAAGCATGTGGGATAAGAGATTGTGGGGGCTTTGGCGTGCCTGATATTTCTCTGCTCTGTTCGATCTCCGCCATTCAATTTTTACTGTTCCCTGTCTTCACGAGACAGAA
TCTACTGAGGATATAAATGCAATACC

Protein sequence

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MIEERQGGAPHGVLLAVVVVVVIVVPFLLGDQGEALTAAISDLLSPFGLLLLPLLLLLAIHFLSSDRASILNAIFSSGEPDSIHRVTGSPLGVALFLLLLLFLLYHRISL
FGADDDSGD

Sed0015603 (gene) of Chayote v1 genome