; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015617 (gene) of Chayote v1 genome

Gene IDSed0015617
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG09:37784336..37787249
RNA-Seq ExpressionSed0015617
SyntenySed0015617
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]2.1e-3340.49Show/hide
Query:  VKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC-RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSV
        ++GP MVEFSGE GAKY+T+ EAR+H+HKG      RQFGF QD+P DLS+ I +A L NV   WMICV   T SQVY+P   ++P N +T  Y  WW  
Subjt:  VKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC-RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSV

Query:  KNGSYLEDNIQRLVN---------------------------SVAPIPSKPKFPKAVGDDKGGKQIRMFDPANFATTENEESHSSHTDRHWKRQKKSHKL
        K+G YL++ +Q L++                           +  P+ ++ KF    G D   K +         +T  E+SHSS+ DRHWKR K+  K 
Subjt:  KNGSYLEDNIQRLVN---------------------------SVAPIPSKPKFPKAVGDDKGGKQIRMFDPANFATTENEESHSSHTDRHWKRQKKSHKL

Query:  SIFDD
        SI D+
Subjt:  SIFDD

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.0e-0357.45Show/hide
Query:  VEKSNF--LSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLG
        V K NF  L KWS E  + PN+ L +WFL+S IHN +PN NP STLG
Subjt:  VEKSNF--LSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLG

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]9.8e-3131.44Show/hide
Query:  RLPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHIS------------------------------------------------------CRQFGFC
        + P+ ++GP MVEFSGE GAKY+T+ EAR H+HKG+++S                                                       RQFGF 
Subjt:  RLPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHIS------------------------------------------------------CRQFGFC

Query:  QDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAV------------
        QD+P DL + I  A   NV   WMIC+   T SQVY+PV A NP   VT  Y  WW  K+G YL++ +Q L++   P   K K  K +            
Subjt:  QDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAV------------

Query:  -----------------------------------GDDKGGKQIRMFDPANFATTENEESHSSHTDRHWKRQKKSHKLSIFDDDFFEGVPSASQFQDLP
                                           G D  GK  R+       +   E+S SS+ DRHWKR KK +K SI D++    VP A+QF D+P
Subjt:  -----------------------------------GDDKGGKQIRMFDPANFATTENEESHSSHTDRHWKRQKKSHKLSIFDDDFFEGVPSASQFQDLP

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.4e-2935.9Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHI---------------------------------SC---------------------RQFGFCQ
        LP+ V+GP M  FSGE G+ YF ++EAR  +H G  I                                 SC                     RQFGF Q
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHI---------------------------------SC---------------------RQFGFCQ

Query:  DIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD
        D+PND+  +    TL+N+L  W IC+   T S++Y+PV ++ P   VT+R+ +WW+ K+ +Y EDN   LV+S  P PS+P+ PK  G + GGK+IR+ +
Subjt:  DIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD

Query:  --PANFATTENE-ESHSSHTDRHWKRQKKSHKLS
            N     NE ES S+ +DRHWKR  K  K+S
Subjt:  --PANFATTENE-ESHSSHTDRHWKRQKKSHKLS

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]1.9e-2938.5Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKG----------------RHISCRQFGFCQ----DIPNDLSKVITRATLNNVLRLWMICVEVETSSQV
        LP+ V+GP M  FSGE G+ YF  +EA   +H G                R +      F Q    D+PND+  +    TL+N+L  W IC+   T S++
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKG----------------RHISCRQFGFCQ----DIPNDLSKVITRATLNNVLRLWMICVEVETSSQV

Query:  YIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD--PANFATTENE-ESHSSHTDRHWKRQKKSHKLS
        Y+P  ++ P   VT+R+ +WW+ K+G+Y EDN   LV+S  P PS+P+ PK  G + GGK+IR+ +    N     NE ES S+ +DRHWKR  K  K+S
Subjt:  YIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD--PANFATTENE-ESHSSHTDRHWKRQKKSHKLS

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.1e-0565.85Show/hide
Query:  FLSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLGR
        FL KWS E F+ PN+SLK+WFL+S IHN  PN +P STLGR
Subjt:  FLSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLGR

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.4e-3039.89Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC------RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVT
        LP  V+GP M  FSGE  + YF ++EAR  +H G  I        R      D+PND+  +    TL+N+L  W IC    T S++Y+P  ++ P   VT
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC------RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVT

Query:  ERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFDP-----ANFATTENEESHSSHTDRHWKRQKKSHKLS
        +R+ +WW+ K+G+Y EDN   LV+SV P PS+P+ PK  G + GGK+IR+ +              +ES SS +DRHWKR  K  K+S
Subjt:  ERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFDP-----ANFATTENEESHSSHTDRHWKRQKKSHKLS

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.5e-2932.84Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHI---------------------------------SC---------------------RQFGFCQ
        LP  V+GP M  FSGE G+ YF ++EAR  +H G  I                                 SC                     RQFGF Q
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHI---------------------------------SC---------------------RQFGFCQ

Query:  DIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD
        D+PND+  +    TL+N+L  W IC    T S++Y+P  ++ P   VT+R+ +WW+ K+G+Y EDN   LV+S  P PS+ + PK  G + GGK+IR+ +
Subjt:  DIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD

Query:  P-----ANFATTENEESHSSHTDRHWKRQKKSHKLSIFDDDFFEGVPSASQFQDLPLTLYADTIFQGI
                      +ES SS +DRHWKR  K  K  +  D   E   SA +  D+PL    +   +G+
Subjt:  P-----ANFATTENEESHSSHTDRHWKRQKKSHKLSIFDDDFFEGVPSASQFQDLPLTLYADTIFQGI

A0A5A7U4C3 Uncharacterized protein1.0e-3340.49Show/hide
Query:  VKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC-RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSV
        ++GP MVEFSGE GAKY+T+ EAR+H+HKG      RQFGF QD+P DLS+ I +A L NV   WMICV   T SQVY+P   ++P N +T  Y  WW  
Subjt:  VKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC-RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSV

Query:  KNGSYLEDNIQRLVN---------------------------SVAPIPSKPKFPKAVGDDKGGKQIRMFDPANFATTENEESHSSHTDRHWKRQKKSHKL
        K+G YL++ +Q L++                           +  P+ ++ KF    G D   K +         +T  E+SHSS+ DRHWKR K+  K 
Subjt:  KNGSYLEDNIQRLVN---------------------------SVAPIPSKPKFPKAVGDDKGGKQIRMFDPANFATTENEESHSSHTDRHWKRQKKSHKL

Query:  SIFDD
        SI D+
Subjt:  SIFDD

A0A5A7U4C3 Uncharacterized protein5.0e-0457.45Show/hide
Query:  VEKSNF--LSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLG
        V K NF  L KWS E  + PN+ L +WFL+S IHN +PN NP STLG
Subjt:  VEKSNF--LSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLG

A0A5A7U4C3 Uncharacterized protein3.1e-3039.89Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC------RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVT
        LP  V+GP M  FSGE  + YF ++EAR  +H G  I        R      D+PND+  +    TL+N+L  W IC    T S++Y+P  ++ P   VT
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISC------RQFGFCQDIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVT

Query:  ERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFDP-----ANFATTENEESHSSHTDRHWKRQKKSHKLS
        +R+ +WW+ K+G+Y EDN   LV+SV P PS+P+ PK  G + GGK+IR+ +              +ES SS +DRHWKR  K  K+S
Subjt:  ERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFDP-----ANFATTENEESHSSHTDRHWKRQKKSHKLS

A0A5A7UGW6 PMD domain-containing protein6.9e-3035.9Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHI---------------------------------SC---------------------RQFGFCQ
        LP+ V+GP M  FSGE G+ YF ++EAR  +H G  I                                 SC                     RQFGF Q
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHI---------------------------------SC---------------------RQFGFCQ

Query:  DIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD
        D+PND+  +    TL+N+L  W IC+   T S++Y+PV ++ P   VT+R+ +WW+ K+ +Y EDN   LV+S  P PS+P+ PK  G + GGK+IR+ +
Subjt:  DIPNDLSKVITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD

Query:  --PANFATTENE-ESHSSHTDRHWKRQKKSHKLS
            N     NE ES S+ +DRHWKR  K  K+S
Subjt:  --PANFATTENE-ESHSSHTDRHWKRQKKSHKLS

A0A5A7UVI5 PMD domain-containing protein9.0e-3038.5Show/hide
Query:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKG----------------RHISCRQFGFCQ----DIPNDLSKVITRATLNNVLRLWMICVEVETSSQV
        LP+ V+GP M  FSGE G+ YF  +EA   +H G                R +      F Q    D+PND+  +    TL+N+L  W IC+   T S++
Subjt:  LPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKG----------------RHISCRQFGFCQ----DIPNDLSKVITRATLNNVLRLWMICVEVETSSQV

Query:  YIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD--PANFATTENE-ESHSSHTDRHWKRQKKSHKLS
        Y+P  ++ P   VT+R+ +WW+ K+G+Y EDN   LV+S  P PS+P+ PK  G + GGK+IR+ +    N     NE ES S+ +DRHWKR  K  K+S
Subjt:  YIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFD--PANFATTENE-ESHSSHTDRHWKRQKKSHKLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACTTTAGAGAGTCACGTGACCACTGTAGAAAAATCTAATTTTCTCTCCAAGTGGTCAAATGAAGGGTTCTTGGGTCCCAACACATCTTTGAAAGCGTGGTTCTT
AGACTCCCCAATTCATAATCATATGCCAAACAACAATCCGTTGTCAACACTAGGTCGACTTCCTAAGCCAGTTAAAGGTCCAATGATGGTCGAATTTTCTGGCGAAAGTG
GGGCCAAATATTTTACTGATTTTGAAGCTCGTGTACACATGCACAAGGGTAGACATATATCATGCCGGCAATTTGGATTCTGTCAAGACATACCCAATGATTTGAGTAAA
GTGATTACTAGGGCTACTTTAAATAATGTATTGCGCCTCTGGATGATATGCGTTGAAGTAGAGACATCCTCTCAAGTATATATTCCTGTGCATGCAATGAACCCACATAA
TCAAGTTACCGAACGTTACCACAATTGGTGGTCGGTAAAGAATGGGAGCTATCTTGAGGATAACATACAAAGGTTGGTGAATAGTGTCGCTCCTATTCCTTCTAAACCCA
AGTTCCCCAAGGCAGTTGGTGATGATAAAGGAGGCAAACAAATTCGCATGTTTGATCCCGCTAATTTTGCCACCACAGAAAATGAGGAGAGTCATAGTAGTCATACTGAC
CGGCATTGGAAGAGGCAGAAGAAGTCCCATAAACTTTCAATTTTTGACGATGACTTTTTTGAGGGGGTTCCAAGTGCTTCGCAGTTTCAAGATCTTCCATTAACCTTGTA
TGCAGACACGATTTTTCAAGGCATCTCAAATATTTGCGCAACTAACCTCCCGTCCCTACAAAAATTTGTCGGAGAATACTTTCAAAAGGTTGGGGAATTCAACAAGCTGC
AATCATTACATTCTTCCCAACTCTCTTCAGCAAGCAAAACTCGTCAGTTGGTAGAGGCAAAGGTTACCTTGGATAACTTATTAAGTAACCAGAATAGCACAATGGCTGAG
ATGGATGTGTTCATTCAACAACATCAAAGGTCATTACGAGAGGGAGAAAGGTTGGAAGCCCAACTTAAAGCTTTGAAGACCCAACAAGAGGAAATCTCGGAGTCTATTGT
TGAGAAGGAGACTTATTTGGCTCATCTCAAACGTGATGAATGTGCAGCACGTGAAGCTATAACTGATGTTGAAAGTTCTGATGCCATTTCTGATGAAGATGCTTGTAACT
TGGAGATACTTCATGGGATGTTGAGTGATGCTCTTCAAGAATTGCAAGATTTCAAATGGGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACTTTAGAGAGTCACGTGACCACTGTAGAAAAATCTAATTTTCTCTCCAAGTGGTCAAATGAAGGGTTCTTGGGTCCCAACACATCTTTGAAAGCGTGGTTCTT
AGACTCCCCAATTCATAATCATATGCCAAACAACAATCCGTTGTCAACACTAGGTCGACTTCCTAAGCCAGTTAAAGGTCCAATGATGGTCGAATTTTCTGGCGAAAGTG
GGGCCAAATATTTTACTGATTTTGAAGCTCGTGTACACATGCACAAGGGTAGACATATATCATGCCGGCAATTTGGATTCTGTCAAGACATACCCAATGATTTGAGTAAA
GTGATTACTAGGGCTACTTTAAATAATGTATTGCGCCTCTGGATGATATGCGTTGAAGTAGAGACATCCTCTCAAGTATATATTCCTGTGCATGCAATGAACCCACATAA
TCAAGTTACCGAACGTTACCACAATTGGTGGTCGGTAAAGAATGGGAGCTATCTTGAGGATAACATACAAAGGTTGGTGAATAGTGTCGCTCCTATTCCTTCTAAACCCA
AGTTCCCCAAGGCAGTTGGTGATGATAAAGGAGGCAAACAAATTCGCATGTTTGATCCCGCTAATTTTGCCACCACAGAAAATGAGGAGAGTCATAGTAGTCATACTGAC
CGGCATTGGAAGAGGCAGAAGAAGTCCCATAAACTTTCAATTTTTGACGATGACTTTTTTGAGGGGGTTCCAAGTGCTTCGCAGTTTCAAGATCTTCCATTAACCTTGTA
TGCAGACACGATTTTTCAAGGCATCTCAAATATTTGCGCAACTAACCTCCCGTCCCTACAAAAATTTGTCGGAGAATACTTTCAAAAGGTTGGGGAATTCAACAAGCTGC
AATCATTACATTCTTCCCAACTCTCTTCAGCAAGCAAAACTCGTCAGTTGGTAGAGGCAAAGGTTACCTTGGATAACTTATTAAGTAACCAGAATAGCACAATGGCTGAG
ATGGATGTGTTCATTCAACAACATCAAAGGTCATTACGAGAGGGAGAAAGGTTGGAAGCCCAACTTAAAGCTTTGAAGACCCAACAAGAGGAAATCTCGGAGTCTATTGT
TGAGAAGGAGACTTATTTGGCTCATCTCAAACGTGATGAATGTGCAGCACGTGAAGCTATAACTGATGTTGAAAGTTCTGATGCCATTTCTGATGAAGATGCTTGTAACT
TGGAGATACTTCATGGGATGTTGAGTGATGCTCTTCAAGAATTGCAAGATTTCAAATGGGTTCCATGA
Protein sequenceShow/hide protein sequence
MKTLESHVTTVEKSNFLSKWSNEGFLGPNTSLKAWFLDSPIHNHMPNNNPLSTLGRLPKPVKGPMMVEFSGESGAKYFTDFEARVHMHKGRHISCRQFGFCQDIPNDLSK
VITRATLNNVLRLWMICVEVETSSQVYIPVHAMNPHNQVTERYHNWWSVKNGSYLEDNIQRLVNSVAPIPSKPKFPKAVGDDKGGKQIRMFDPANFATTENEESHSSHTD
RHWKRQKKSHKLSIFDDDFFEGVPSASQFQDLPLTLYADTIFQGISNICATNLPSLQKFVGEYFQKVGEFNKLQSLHSSQLSSASKTRQLVEAKVTLDNLLSNQNSTMAE
MDVFIQQHQRSLREGERLEAQLKALKTQQEEISESIVEKETYLAHLKRDECAAREAITDVESSDAISDEDACNLEILHGMLSDALQELQDFKWVP