CuGenDBv2

Gene ID	Sed0015624
Organism	Sechium edule (Chayote v1)
Description	Fiber protein Fb15
Genome location	LG08:2921717..2923941
RNA-Seq Expression	Sed0015624
Synteny	Sed0015624
Gene Ontology terms	GO:0009299 - mRNA transcription (biological process) GO:0009416 - response to light stimulus (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]

4.9e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKKAV+R LDNYNAKYIQT S+DPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_004146334.1 uncharacterized protein LOC101202935 [Cucumis sativus]

4.9e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKKAV+R LDNYNAKYIQT S+DPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_022135438.1 uncharacterized protein LOC111007393 [Momordica charantia]

8.4e-41

92.22

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPG+VKPMLSID  KKAV+RGLDNYNAKYIQTGS+DPLLHVCFGGM+FSYLVALPEERRHL HQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_022974229.1 uncharacterized protein LOC111472849 [Cucurbita maxima]

2.2e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELPGYVKPMLSID AKKAVQRGLDNYNAKYIQTGS+DPLLHVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

XP_038879762.1 uncharacterized protein LOC120071511 [Benincasa hispida]

3.4e-42

95.56

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEI+GLKVKELP YVKPMLSIDSAKKAVQRGLDNYNAKYIQTGS+DPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXD4 Uncharacterized protein

2.4e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKKAV+R LDNYNAKYIQT S+DPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A5D3DYB3 Uncharacterized protein

3.5e-40

91.11

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELP YVKPMLSID+AKK VQR LDNY+AKYIQT S+DPL HVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1C4T8 uncharacterized protein LOC111007393

4.1e-41

92.22

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAMKQFFSEIKGLKVKELPG+VKPMLSID  KKAV+RGLDNYNAKYIQTGS+DPLLHVCFGGM+FSYLVALPEERRHL HQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1F109 uncharacterized protein LOC111441149

1.6e-40

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELPGYVKPML+IDS KKAVQRGLDNYNAKYIQT S+DPLLHVC+GGMI SYL+ALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

A0A6J1IH01 uncharacterized protein LOC111472849

1.1e-41

93.33

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MAM+QFFSEI+GLKVKELPGYVKPMLSID AKKAVQRGLDNYNAKYIQTGS+DPLLHVC+GGMI SYLVALPEERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30010.1 unknown protein

9.6e-35

71.11

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Query:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH
        MA+++ +SEI+G KV ELPGY+K   S+++ K +V+RGLDNYN KYIQT SVDP+LH+CF GM FSYLVALP ERRHLEHQQHAKEHGGH
Subjt:  MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAGGTCAAGGAGCTGCCCGGCTACGTGAAGCCGATGCTTTCCATTGATTCTGCGAAGAAGGCAGTGCAGAG
AGGTCTCGACAATTACAACGCTAAGTATATTCAAACCGGATCGGTTGATCCTTTGTTGCATGTTTGCTTTGGCGGTATGATCTTTTCTTACCTCGTTGCGCTCCCTGAGG
AACGGCGCCACCTTGAACATCAGCAACACGCTAAAGAACATGGCGGCCATTGATTCAGTTTTGTATCTTTTGAGGTACGGGTTCTTGTGTGGAGTATTTGTCTAATTTGG
ATTCTGTAGGTCAAGTCGTATTTGGTTTTTCTTTTTTTGGATTGATCGATTAGGGTTCGGTTTATGCATCTATTGAAATTAGGATATATTGGGGGAATGGGAATCTGTTT
TTCATTTTCATTGTCGTTATCTTTGTCAACTGATTCTGGATGCTGAGATTGAGTCTGTTTCCATTGTTGTTATTGTGTTGTTTTTAGTCACTGCAGGTGCTCAAATGATC
TTCTTTTTTTTTGTGATTGAATTTTTTATTACTTAGTGAATATTCACGTTTTTTCCTGTGGGATCTTTTAATTCTGCTAGTAGCATTTGTCCCCAAGGGATGGAGCAATG
GTTGAAGACTTGGACTTTGAATCAAAGTCCTGGGTTCGAGACTAACTTGTACCTAGCCTAGGAACGGACGTGGTTATCTTTGTTTCAAAAAAGAACTTATGTGAAGAGCA
TTTAGCACATGGGTCAAGGTGCCTCAAATGGTT

Protein sequence

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MAMKQFFSEIKGLKVKELPGYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSVDPLLHVCFGGMIFSYLVALPEERRHLEHQQHAKEHGGH

Sed0015624 (gene) of Chayote v1 genome