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Sed0015643 (gene) of Chayote v1 genome

Gene IDSed0015643
OrganismSechium edule (Chayote v1)
Description4-coumarate-CoA ligase
Genome locationLG02:44050761..44052191
RNA-Seq ExpressionSed0015643
SyntenySed0015643
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR000873 - AMP-dependent synthetase/ligase
IPR042099 - ANL, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580619.1 4-coumarate--CoA ligase-like 7, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1745.74Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP++RLKRVTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

KAG7017376.1 4-coumarate--CoA ligase-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1746.51Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRLKRVTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

XP_008442710.1 PREDICTED: 4-coumarate--CoA ligase-like 7 [Cucumis melo]7.9e-1744.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRL++VTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

XP_011651966.2 4-coumarate--CoA ligase-like 7 [Cucumis sativus]7.9e-1744.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRL++VTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

XP_022982901.1 4-coumarate--CoA ligase-like 7 [Cucurbita maxima]1.0e-1644.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRLK VTFTSS+PKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

TrEMBL top hitse value%identityAlignment
A0A0A0LDK0 Uncharacterized protein3.8e-1744.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRL++VTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

A0A1S3B5U8 4-coumarate--CoA ligase-like 73.8e-1744.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRL++VTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

A0A2C9V8E9 AMP-binding domain-containing protein2.8e-2070.83Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAPYKRLKRVTFTSSVPKSTSEK
        GYFNN +AT   ID +GW+ TGD+ Y +E GELFVVDRIKELIKC GFQVAP+KRL+RVTF +SVPKS S K
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAPYKRLKRVTFTSSVPKSTSEK

A0A5A7TKZ4 4-coumarate--CoA ligase-like 73.8e-1744.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRL++VTFTSSVPKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

A0A6J1J0P0 4-coumarate--CoA ligase-like 75.0e-1744.96Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------
        GYFNN+KATS+ IDD+GWV TGDI Y +EEGELFVVDRIKELIKC GF                                                    
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGF----------------------------------------------------

Query:  -----QVAPYKRLKRVTFTSSVPKSTSEK
             QVAP+KRLK VTFTSS+PKS S K
Subjt:  -----QVAPYKRLKRVTFTSSVPKSTSEK

SwissProt top hitse value%identityAlignment
M4IQR7 Probable CoA ligase CCL51.9e-1363.46Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF+N++ATS  ID  GW+RTGD+ Y  E+G +FVVDR+KELIK  G+QVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

M4IQS1 Probable CoA ligase CCL105.3e-1671.15Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GY NN +AT   ID++GWV+TGDI Y  EEG+LFVVDR+KELIKC GFQVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

M4IRL6 Probable CoA ligase CCL78.5e-1467.31Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYFNN +AT   ID +GWV TGD+ Y  E+G L+VVDRIKELIK  GFQVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

Q84P25 4-coumarate--CoA ligase-like 21.9e-1361.54Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF NK+AT+  ID  GW++TGD+ Y   +G +FVVDR+KELIKC G+QVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

Q9LQ12 4-coumarate--CoA ligase-like 11.9e-1361.54Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF NK+ T + ID++GW+ TGDI Y  ++G++F+VDRIKELIK  GFQVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

Arabidopsis top hitse value%identityAlignment
AT1G20480.1 AMP-dependent synthetase and ligase family protein1.3e-1461.54Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF NK+AT+  ID  GW++TGD+ Y   +G +FVVDR+KELIKC G+QVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

AT1G20510.1 OPC-8:0 CoA ligase12.3e-1461.54Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF+N++ATS  +D  GW+RTGD+ Y  E+G +FVVDR+KELIK  G+QVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

AT1G20510.2 OPC-8:0 CoA ligase12.3e-1461.54Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF+N++ATS  +D  GW+RTGD+ Y  E+G +FVVDR+KELIK  G+QVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

AT1G62940.1 acyl-CoA synthetase 51.3e-1461.54Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GYF NK+ T + ID++GW+ TGDI Y  ++G++F+VDRIKELIK  GFQVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP

AT4G05160.1 AMP-dependent synthetase and ligase family protein1.8e-1465.38Show/hide
Query:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP
        GY NN +AT E ID + WV TGD+ Y +E+G L+VVDRIKELIK  GFQVAP
Subjt:  GYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTGCAGGATATTTCAACAATAAGAAAGCTACCAGCGAAGCCATAGATGATCGAGGATGGGTACGCACCGGAGATATCAGATATTGCAGTGAAGAAGGAGAATT
ATTTGTTGTGGACAGAATCAAAGAACTCATCAAGTGTTGTGGTTTTCAGGTTGCACCATACAAGAGACTAAAAAGAGTAACCTTCACGAGTAGTGTTCCGAAGTCGACTT
CAGAGAAGGGAGCTTATAGTGCAAGTCCGCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTGCAGGATATTTCAACAATAAGAAAGCTACCAGCGAAGCCATAGATGATCGAGGATGGGTACGCACCGGAGATATCAGATATTGCAGTGAAGAAGGAGAATT
ATTTGTTGTGGACAGAATCAAAGAACTCATCAAGTGTTGTGGTTTTCAGGTTGCACCATACAAGAGACTAAAAAGAGTAACCTTCACGAGTAGTGTTCCGAAGTCGACTT
CAGAGAAGGGAGCTTATAGTGCAAGTCCGCGCTAA
Protein sequenceShow/hide protein sequence
MSIAGYFNNKKATSEAIDDRGWVRTGDIRYCSEEGELFVVDRIKELIKCCGFQVAPYKRLKRVTFTSSVPKSTSEKGAYSASPR