; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015663 (gene) of Chayote v1 genome

Gene IDSed0015663
OrganismSechium edule (Chayote v1)
Descriptionlysine-rich arabinogalactan protein 18-like
Genome locationLG05:39656812..39657839
RNA-Seq ExpressionSed0015663
SyntenySed0015663
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605547.1 hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3665.29Show/hide
Query:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD
        MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS PAESPL SPPAPPPSDLT   SP  VPSPSP+P PS + AD
Subjt:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD

Query:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        SD  N+ ANGGG E ++ + GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Subjt:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

XP_022944675.1 alpha carbonic anhydrase 8-like [Cucurbita moschata]5.9e-3464.85Show/hide
Query:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSN
        MAK IA  CCLL +N AFSL Q  E  PSP P SA+  P           PAS P ESPL SPPAPPPSDL    SP   PSPS +P PSP  AD D  N
Subjt:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSN

Query:  ATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        + +N GGEE S+++ GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQYG AARSSFL
Subjt:  ATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

XP_022958106.1 lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]4.1e-3564.71Show/hide
Query:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD
        MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS PAESPL SPPAPP SDLT   SP  VPSPSP+P PS + AD
Subjt:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD

Query:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        SD  N+ ANGGG E ++ + GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Subjt:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

XP_022995398.1 lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]4.4e-3766.47Show/hide
Query:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD
        MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS PAESPL SPPAPPPSDLT   SP  VPSPSP+P PS + AD
Subjt:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD

Query:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        SD  N+ ANGGG E ++A+ GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQ+G AARSSFL
Subjt:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

XP_023534499.1 alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo]1.7e-3665.29Show/hide
Query:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD
        MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS PAESPL SPPAPPPSDLT   SP  VPSPSP+P PS + AD
Subjt:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD

Query:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        SD  N+ ANGGG E ++ + GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Subjt:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

TrEMBL top hitse value%identityAlignment
A0A6J1CIM1 classical arabinogalactan protein 1-like3.0e-3158.19Show/hide
Query:  MAKSIALICCL----LSINAAFSL-----AQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSP
        MAKS+A  C L    L IN   SL       P   SPSP+P SA+DSP           P++ P ESPL+SPPAPPPSDL    +P P PSPSPSP+P+P
Subjt:  MAKSIALICCL----LSINAAFSL-----AQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSP

Query:  MPA---DSDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
         P+   DSD S + A+GG  E   A+ GGM+GGKKAGIA GVIAA CFVGIGGI YKKR++NIRRSQYG AARSSFL
Subjt:  MPA---DSDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

A0A6J1FYT3 alpha carbonic anhydrase 8-like2.9e-3464.85Show/hide
Query:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSN
        MAK IA  CCLL +N AFSL Q  E  PSP P SA+  P           PAS P ESPL SPPAPPPSDL    SP   PSPS +P PSP  AD D  N
Subjt:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSN

Query:  ATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        + +N GGEE S+++ GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQYG AARSSFL
Subjt:  ATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

A0A6J1H149 lysine-rich arabinogalactan protein 18-like2.0e-3564.71Show/hide
Query:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD
        MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS PAESPL SPPAPP SDLT   SP  VPSPSP+P PS + AD
Subjt:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD

Query:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        SD  N+ ANGGG E ++ + GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Subjt:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

A0A6J1JA87 proline-rich receptor-like protein kinase PERK121.4e-3364.24Show/hide
Query:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSN
        MAK IA  CCLL +N AFSL Q  E  PS  P SA   P          +PAS P ESPL SPPAPPPSDL    SP  VPSPSP+  P+P  ADSD  N
Subjt:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSN

Query:  ATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        + +N GG E S+++ GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQYG AARSSFL
Subjt:  ATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

A0A6J1K7T9 lysine-rich arabinogalactan protein 18-like2.1e-3766.47Show/hide
Query:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD
        MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS PAESPL SPPAPPPSDLT   SP  VPSPSP+P PS + AD
Subjt:  MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPAD

Query:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        SD  N+ ANGGG E ++A+ GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQ+G AARSSFL
Subjt:  SDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28440.1 proline-rich family protein2.9e-0741.96Show/hide
Query:  QPPESSPSPAPVSASDSPIPASFPAESPLSSP------PAPPPSDLTSGASPPPVPSPSPSPTPSP---MPADSDSSNATANGGGEEHSKAADGGMSGGK
        Q P SSP P  ++ S SP P     ESP SSP      P P PSD  S   P P     PSP PSP   M  D  +S+A      +E  +  D GMSG +
Subjt:  QPPESSPSPAPVSASDSPIPASFPAESPLSSP------PAPPPSDLTSGASPPPVPSPSPSPTPSP---MPADSDSSNATANGGGEEHSKAADGGMSGGK

Query:  KAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL
        KAGIA+G I     + IG + YKKRRDN+ R++Y       FL
Subjt:  KAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

AT3G45230.1 hydroxyproline-rich glycoprotein family protein1.0e-1242.42Show/hide
Query:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSPIPA-SFPAESPL--SSPP------APPPSDLTSGASPPPVP----SPSPSPTPSPMPADSD
        +A  ++L+     I    S A  P+ + SP   ++  S + + + PAESP+  SSPP      +P PS   S +  PP+P    SPS S +PSP P  SD
Subjt:  MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSPIPA-SFPAESPL--SSPP------APPPSDLTSGASPPPVP----SPSPSPTPSPMPADSD

Query:  SSNATANG-GGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAAR
         +++   G  GE+    + GGMSGGKK G+A G IAA C VG+ G  YKKR++NIRRS+YG AAR
Subjt:  SSNATANG-GGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAAR

AT5G60630.1 FUNCTIONS IN: molecular_function unknown7.3e-0645.63Show/hide
Query:  SGASPPPVPSPSPSPTPS-----PMPADSDSSN-----ATANGGGEEHSKAADGGMSGGKKAGIA-VGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAAR
        S + P      SPSPT S     P  +    SN      +   GGEE S   + G  GGKK GIA VG IAAA  VG GG   KKRR+NIRRS+YG A+ 
Subjt:  SGASPPPVPSPSPSPTPS-----PMPADSDSSN-----ATANGGGEEHSKAADGGMSGGKKAGIA-VGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAAR

Query:  SSF
          F
Subjt:  SSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCCATTGCTCTGATCTGTTGTCTTCTTTCGATCAACGCCGCTTTCTCTCTGGCTCAACCGCCGGAATCTTCGCCTTCTCCGGCACCTGTATCTGCGTCGGA
TTCTCCTATTCCGGCAAGTTTCCCGGCGGAATCGCCTTTGAGCTCTCCTCCGGCACCTCCGCCCTCAGATCTCACTTCTGGTGCGTCGCCACCGCCTGTTCCATCTCCGT
CTCCGTCGCCGACTCCTTCACCGATGCCCGCCGACAGTGATTCCAGTAACGCCACCGCCAATGGCGGTGGAGAAGAACACTCGAAAGCCGCCGACGGCGGGATGAGCGGA
GGCAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTCGTCGGAATAGGAGGAATCGCCTACAAGAAGCGCCGAGACAACATTCGCCGATCTCAGTACGG
GCAGGCCGCTAGGTCGTCGTTCCTATGA
mRNA sequenceShow/hide mRNA sequence
GCGCAGATCCAGTAATATTCTACCAGAATCAATTTTGTTTTTTTTAAAACATTCCTACGTGGCGCTCTCTCATTGGGTAATTTTCTCCTATTCCCGCTTCTATTTAAACC
GCTTTACACCAGTGTTTGGATCTACTCTCAATTTAATTCCTTCCTCACCGACCTCGATTTCTGAACCCACATTTCCCTTTTTCTGATTCTTCTTCCCAATACGAAAATGG
CGAAATCCATTGCTCTGATCTGTTGTCTTCTTTCGATCAACGCCGCTTTCTCTCTGGCTCAACCGCCGGAATCTTCGCCTTCTCCGGCACCTGTATCTGCGTCGGATTCT
CCTATTCCGGCAAGTTTCCCGGCGGAATCGCCTTTGAGCTCTCCTCCGGCACCTCCGCCCTCAGATCTCACTTCTGGTGCGTCGCCACCGCCTGTTCCATCTCCGTCTCC
GTCGCCGACTCCTTCACCGATGCCCGCCGACAGTGATTCCAGTAACGCCACCGCCAATGGCGGTGGAGAAGAACACTCGAAAGCCGCCGACGGCGGGATGAGCGGAGGCA
AGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTCGTCGGAATAGGAGGAATCGCCTACAAGAAGCGCCGAGACAACATTCGCCGATCTCAGTACGGGCAG
GCCGCTAGGTCGTCGTTCCTATGAGGAACTGAATCGCGATGGTATGGAATTCTCTGCTTTACAAGAGGATGGCCTTTCTGTTGATTAACTAGCATTATTGTTTTTGTTTT
GATTAGGTTTTTTTTTTTTTTTTGGTTAAGTCATTGTTCTGGAGATTGCTTGTCAATTCGTTTAATCGGCTAATTTTGAGTAGCAATGTGTGATTATTGCTCCATATGAT
AGTTCTTAGTTTCTTGCTTATTCAGCCGACATTGCCGCTTTCTTTGTAGTTCCTTTTTGTTGCTAAAATTTCTTGTCATACTACATATAATATAATCTTCTTCCTGCCTC
ATTCATCGTTGGTTTAATTTCATGGAAAATTTTGGGAG
Protein sequenceShow/hide protein sequence
MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSPIPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAADGGMSG
GKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL