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Sed0015670 (gene) of Chayote v1 genome

Gene IDSed0015670
OrganismSechium edule (Chayote v1)
Descriptionmyb-related transcription factor, partner of profilin-like
Genome locationLG12:32482477..32486043
RNA-Seq ExpressionSed0015670
SyntenySed0015670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146326.1 uncharacterized protein LOC101221556 [Cucumis sativus]1.8e-5584.67Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPINSESTPPPLIGKIGPYTVFMTPPPTPS      P+FESPKKVIQPPPVQPPPHQF+KSVS+AAV N ++SV+GFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGME  DMKAKEP SKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
XP_008453592.1 PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo]7.9e-5685.4Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPINSESTPPPLIGKIGPYTVFMTPPPTPS      PVFESPKKVIQPPPVQPPPHQF+KSVS+AAV N ++SV+GFFRNAVSKV++AHS LDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGME  DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
XP_022930193.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata]2.0e-5484.67Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS      PVFESPKKVIQPPPVQPPP QF+KSVSV  V N ++SVAGFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGMEN DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
XP_023530480.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo]3.9e-5585.4Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS      PVFESPKKVIQPPPVQPPP QF+KSVSVA V N ++SVAGFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGMEN DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
XP_038878417.1 uncharacterized protein LOC120070657 [Benincasa hispida]7.9e-5686.13Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPS      PVFESPKKVIQPPPVQPPPHQF+KSVSVAA  N ++SV+GFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGMEN DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
TrEMBL top hitse value%identityAlignment
A0A0A0LUN3 Uncharacterized protein8.5e-5684.67Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPINSESTPPPLIGKIGPYTVFMTPPPTPS      P+FESPKKVIQPPPVQPPPHQF+KSVS+AAV N ++SV+GFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGME  DMKAKEP SKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
A0A1S3BXF0 uncharacterized protein LOC1034942563.8e-5685.4Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPINSESTPPPLIGKIGPYTVFMTPPPTPS      PVFESPKKVIQPPPVQPPPHQF+KSVS+AAV N ++SV+GFFRNAVSKV++AHS LDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGME  DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
A0A5D3CIQ6 Wiskott-Aldrich syndrome protein family member 24.1e-5084.55Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPINSESTPPPLIGKIGPYTVFMTPPPTPS      PVFESPKKVIQPPPVQPPPHQF+KSVS+AAV N ++SV+GFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENV
        GLNQSKYQWA+DDYYESKGM++V
Subjt:  GLNQSKYQWAVDDYYESKGMENV
A0A6J1EQV9 myb-related transcription factor, partner of profilin-like9.4e-5584.67Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS      PVFESPKKVIQPPPVQPPP QF+KSVSV  V N ++SVAGFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGMEN DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
A0A6J1KZL1 myb-related transcription factor, partner of profilin-like9.4e-5584.67Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP TPS      PVFESPKKVIQPPPVQPPP QF+KSVSV  V N ++SVAGFFRNAVSKV++AHSSLDD+LARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPPTPS------PVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWF

Query:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        GLNQSKYQWA+DDYYESKGMEN DMKAKEPSSKAQSV
Subjt:  GLNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G18910.1 hydroxyproline-rich glycoprotein family protein1.1e-3663.97Show/hide
Query:  MPINSE-STPPPLIGKIGPYTVFMTPPPTPSPVFESP----KKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWFG
        MPIN + STPPP+IGKIGPYTVFMTPP TP P  ESP    +K +  PPV PPP QF KSV   A  ++D SV GFF+NAV+KV++AHSS+DD+L RWFG
Subjt:  MPINSE-STPPPLIGKIGPYTVFMTPPPTPSPVFESP----KKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWFG

Query:  LNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV
        LNQSKYQWA+D+YYESK  +   +KAKE   K QSV
Subjt:  LNQSKYQWAVDDYYESKGMENVDMKAKEPSSKAQSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATCAACAGCGAATCTACGCCGCCGCCGTTGATCGGAAAAATCGGCCCCTACACCGTCTTCATGACCCCGCCGCCGACCCCTTCGCCGGTTTTCGAGTCGCCCAA
GAAGGTCATTCAGCCGCCGCCGGTTCAGCCGCCGCCGCATCAGTTCGAAAAGTCGGTTTCCGTTGCTGCTGTGCATAATAGGGATTCGTCCGTTGCTGGGTTCTTTAGAA
ATGCGGTCTCGAAAGTGCGGGATGCACATTCAAGCTTGGATGACTATTTGGCACGTTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGGTAGATGATTATTATGAG
AGCAAGGGGATGGAAAATGTCGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAA
mRNA sequenceShow/hide mRNA sequence
GGCAAATGGAGAGAAGAGTGTGAAGAAAGAACAAAGATCCAACCAGTCGTTACGAACACTGAACTCGGGTTGCGTGCGATCCGTTCACCAGTTTTTGAACACTGTTTTTT
CAGTGGCCAAAAATCAAAATACCCTCTCAAAATTAAAGCCGACCTAAAGCAAAATTCCCCATTACAACTTTCTCTGCATTTTCTCTTCTTCTTCTTTCTTTACCTTTTTT
TTGGTACAATTTCAACAATGCCCATCAACAGCGAATCTACGCCGCCGCCGTTGATCGGAAAAATCGGCCCCTACACCGTCTTCATGACCCCGCCGCCGACCCCTTCGCCG
GTTTTCGAGTCGCCCAAGAAGGTCATTCAGCCGCCGCCGGTTCAGCCGCCGCCGCATCAGTTCGAAAAGTCGGTTTCCGTTGCTGCTGTGCATAATAGGGATTCGTCCGT
TGCTGGGTTCTTTAGAAATGCGGTCTCGAAAGTGCGGGATGCACATTCAAGCTTGGATGACTATTTGGCACGTTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGG
TAGATGATTATTATGAGAGCAAGGGGATGGAAAATGTCGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGAACAGTAGAGAAAGTATTTATAC
CTATCTATGCAATGGCTGAAGTGGATCTGATTGTTTATAAGATGCTGGTGAATTGGCTAGCCATCTTGGAATGTGATTCCATCTACCTTATACAGAAATCGACAGACTTC
CGTCGTGTTGTAGTTGTTAAGCTATGTAATGTTATGTATCGCCGTCGTCGTCTTTTGTCCCCATTTGATCTCTCTCTTGTTCTTTTGATGCTGAACCTTTGGCTTGTGTA
TTTTGAGCTGCTTTTTTTCAGTTATTTTTGCCACTGTAATGAAGGCAATGTTTGGCTACATCCATCCAAGTCATTTGGGAGTTCATCAAATTGGTAAATCCTATCTTGGA
TTTCTTTAAAGTCAGTTGTTTAGTTTATAGAAATGATGCATTGTCATTAAAAGATGGCAGTGGAAATGCCTTTTATATGGAGGCATCACTTTCCTTTCATTTACAATAAT
TGAATAGTGGATTGTAGGCAATACCTTGAGATGGAAAATGAATGTTGAAGGGTAATTC
Protein sequenceShow/hide protein sequence
MPINSESTPPPLIGKIGPYTVFMTPPPTPSPVFESPKKVIQPPPVQPPPHQFEKSVSVAAVHNRDSSVAGFFRNAVSKVRDAHSSLDDYLARWFGLNQSKYQWAVDDYYE
SKGMENVDMKAKEPSSKAQSV