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Sed0015682 (gene) of Chayote v1 genome

Gene IDSed0015682
OrganismSechium edule (Chayote v1)
Descriptionlight-harvesting complex-like protein OHP2, chloroplastic
Genome locationLG11:29725975..29729501
RNA-Seq ExpressionSed0015682
SyntenySed0015682
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0050833 - pyruvate transmembrane transporter activity (molecular function)
InterPro domainsIPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032876.1 Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.9e-6481.28Show/hide
Query:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--
        S PFAKIKI    S +AA SP+ASAA S   SSS AHSS+RFS+SKPFVFTIRSSQT+GPIRRPAAPSLREP+PP P PP + PP SA APVAQ + K  
Subjt:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--

Query:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AKQ+N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDLD
Subjt:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

XP_022963822.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]3.4e-6581.82Show/hide
Query:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--
        S PFAKIKI    S +AA SP+ASAA S   SSS AHSS+RFS+SKPFVFTIRSSQT+GPIRRPAAPSLREP+PP P PP + PP SA APVAQP+ K  
Subjt:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--

Query:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AKQ+N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDLD
Subjt:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

XP_022990469.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]2.4e-6380.21Show/hide
Query:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--
        S PFAKIKI    S +AA SP+ASA  S   SSS AHSS+RFS+SKPFVFTIRSSQT+GPIRRPAAPSLREP+PP P PP +  P SA AP +QP+AK  
Subjt:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--

Query:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AKQ+N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDLD
Subjt:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

XP_022993308.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]1.1e-6078.07Show/hide
Query:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA
        SIPFAKIKI PAA++SPA    SA+ +++ASSS AHSS+RFS+SKPFVFTIRSSQTEGP+RRPAAPSLREP+  PPSPPS +PP     P +Q    PA 
Subjt:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA

Query:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AK +N ITLEFQRQKAKELQEYFKQKKL+E DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDL+
Subjt:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

XP_023551626.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo]6.7e-6178.07Show/hide
Query:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA
        SIPFAKIKI PA ++SPA    SA+ +++ASSS AHSS+RFS+SKPFVFTIRSSQTEGP+RRPAAPSLREP+  PPSPPS +PP     P +Q    PA 
Subjt:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA

Query:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AK +N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDL+
Subjt:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

TrEMBL top hitse value%identityAlignment
A0A6J1BW66 light-harvesting complex-like protein OHP2, chloroplastic6.7e-5977.54Show/hide
Query:  SIPFAKIKISPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPP---PSPPSQS-PPYSAAAPVAQ---PAA
        SIPFAK   +P+ A SP+ SAA  A+ASSS  H+S+RFS+SKPFVFTIRSSQTEGP+RRPAAPSLREP+PPP   P+PPSQS PP   +APVAQ    A 
Subjt:  SIPFAKIKISPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPP---PSPPSQS-PPYSAAAPVAQ---PAA

Query:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AKQ+N ITLEFQRQKAKELQE+FKQKKLE+A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFV QVKILLSNFGIVDL+
Subjt:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

A0A6J1FIC8 light-harvesting complex-like protein OHP2, chloroplastic7.2e-6177.54Show/hide
Query:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA
        SIPFAKIKI PA ++SPA    SA+ +++ASSS AHSS+RFS++KPFVFTIRSSQTEGP+RRPAAPSLREP+  PPSPPS +PP     P +Q    PA 
Subjt:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA

Query:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AK +N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDL+
Subjt:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

A0A6J1HG91 light-harvesting complex-like protein OHP2, chloroplastic1.7e-6581.82Show/hide
Query:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--
        S PFAKIKI    S +AA SP+ASAA S   SSS AHSS+RFS+SKPFVFTIRSSQT+GPIRRPAAPSLREP+PP P PP + PP SA APVAQP+ K  
Subjt:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--

Query:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AKQ+N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDLD
Subjt:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

A0A6J1JS47 light-harvesting complex-like protein OHP2, chloroplastic1.2e-6380.21Show/hide
Query:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--
        S PFAKIKI    S +AA SP+ASA  S   SSS AHSS+RFS+SKPFVFTIRSSQT+GPIRRPAAPSLREP+PP P PP +  P SA AP +QP+AK  
Subjt:  SIPFAKIKI----SPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAK--

Query:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AKQ+N ITLEFQRQKAKELQEYFKQKKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDLD
Subjt:  -AKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

A0A6J1K1U3 light-harvesting complex-like protein OHP2, chloroplastic5.5e-6178.07Show/hide
Query:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA
        SIPFAKIKI PAA++SPA    SA+ +++ASSS AHSS+RFS+SKPFVFTIRSSQTEGP+RRPAAPSLREP+  PPSPPS +PP     P +Q    PA 
Subjt:  SIPFAKIKISPAAATSPAA---SAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQ----PAA

Query:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
         AK +N ITLEFQRQKAKELQEYFKQKKL+E DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV QVKILLSNFGIVDL+
Subjt:  KAKQENAITLEFQRQKAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

SwissProt top hitse value%identityAlignment
Q9FEC1 Light-harvesting complex-like protein OHP2, chloroplastic1.0e-4370Show/hide
Query:  SAAASSSPAHSSVRFS-ASKPFVFTIRSSQTEGPIRRPAA-PSLREPTPP-PPSPPSQSPPYSAAAPVAQPAAKAKQENAITLEFQRQKAKELQEYFKQK
        S+++SSS A SS RFS  +KP VF IR SQTEGP+RRP+A P+LREP  P PPS PS SPP S   P  Q A     ++  T+EFQRQKAKELQEYFKQK
Subjt:  SAAASSSPAHSSVRFS-ASKPFVFTIRSSQTEGPIRRPAA-PSLREPTPP-PPSPPSQSPPYSAAAPVAQPAAKAKQENAITLEFQRQKAKELQEYFKQK

Query:  KLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
        KLE A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ V QVKILLSNFGI+DL+
Subjt:  KLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD

Arabidopsis top hitse value%identityAlignment
AT1G34000.1 one-helix protein 27.1e-4570Show/hide
Query:  SAAASSSPAHSSVRFS-ASKPFVFTIRSSQTEGPIRRPAA-PSLREPTPP-PPSPPSQSPPYSAAAPVAQPAAKAKQENAITLEFQRQKAKELQEYFKQK
        S+++SSS A SS RFS  +KP VF IR SQTEGP+RRP+A P+LREP  P PPS PS SPP S   P  Q A     ++  T+EFQRQKAKELQEYFKQK
Subjt:  SAAASSSPAHSSVRFS-ASKPFVFTIRSSQTEGPIRRPAA-PSLREPTPP-PPSPPSQSPPYSAAAPVAQPAAKAKQENAITLEFQRQKAKELQEYFKQK

Query:  KLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD
        KLE A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ V QVKILLSNFGI+DL+
Subjt:  KLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCAATCCCCTTCGCCAAAATCAAAATCTCGCCGGCCGCCGCCACTTCCCCGGCGGCATCAGCCGCAGGATCCGCTGCCGCTTCTTCCTCGCCGGCTCACAGTTC
CGTCAGATTCTCTGCCTCCAAGCCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGAAGGTCCGATTCGGAGACCGGCGGCTCCTTCTCTTAGAGAGCCTACGCCCCCGC
CGCCGTCTCCTCCGTCGCAATCGCCTCCGTATTCGGCGGCGGCTCCTGTTGCTCAGCCGGCGGCGAAGGCGAAACAGGAAAATGCGATCACGTTGGAGTTTCAGAGGCAG
AAGGCTAAGGAGCTTCAGGAGTATTTCAAGCAGAAGAAACTTGAGGAAGCTGATCAGGGACCCTTCTTTGGCTTCATTGGGAAGAATGAGATTTCTAATGGAAGGTGGGC
AATGTTTGGTTTTGCTGTTGGATTGCTCACAGAATATGCAACTGGTTCAAACTTTGTTGTTCAAGTAAAAATCCTCCTCTCAAATTTTGGGATAGTAGATCTCGATTAA
mRNA sequenceShow/hide mRNA sequence
GCGATATTGTATCCACAACAAACATATCCAGAATCCATTTCTCCAAAAAAAAATTCACAAGCAATCATTCAATCTTTGACTTCAATTCCCCAATTCCTAATCCATTTCAG
TTCCTCAAACAAATCTGAAAGAGAAATTTCACAGAGAAAGAGAAACGGAAATGTCATCAATCCCCTTCGCCAAAATCAAAATCTCGCCGGCCGCCGCCACTTCCCCGGCG
GCATCAGCCGCAGGATCCGCTGCCGCTTCTTCCTCGCCGGCTCACAGTTCCGTCAGATTCTCTGCCTCCAAGCCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGAAGG
TCCGATTCGGAGACCGGCGGCTCCTTCTCTTAGAGAGCCTACGCCCCCGCCGCCGTCTCCTCCGTCGCAATCGCCTCCGTATTCGGCGGCGGCTCCTGTTGCTCAGCCGG
CGGCGAAGGCGAAACAGGAAAATGCGATCACGTTGGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTCAAGCAGAAGAAACTTGAGGAAGCTGATCAGGGA
CCCTTCTTTGGCTTCATTGGGAAGAATGAGATTTCTAATGGAAGGTGGGCAATGTTTGGTTTTGCTGTTGGATTGCTCACAGAATATGCAACTGGTTCAAACTTTGTTGT
TCAAGTAAAAATCCTCCTCTCAAATTTTGGGATAGTAGATCTCGATTAACATGATGTACGAGGTCGATGCTGCGATATTTTTCCAATTGCTGTAATTTATAATGATAGTC
TTTCTTGAAAGTTTTGCTGTTTGATACACTCAATAGCCATTCAAAAATGTGTGCTCCTTGCGATGCTTTCTGTTATATATAAAGTCTTCCTTTATCTTTATGAGTCTGTG
TAATTCACTGGGAGCATATTAGCTTTTCACACCTTGCTAAACTTTTGTTGCATAATCTGCTCAATAGATAAACCTGCCTCCTATTTAGTCTCTTGGAGTGCAGCTCGTTT
TGTCGAAAATTAAATCGATCGAAGCTATCTTTTACTTGGAGTTTCCTTTGCTAATCGTGTTGTTGACTTCCTGTCTCTCTCAATTCATACTTTATGGATTTGTGATCTGA
ACTGTATATCTGGTTGGTCTTGCTTGAAATTTTGATGTGCAGATAAAAATGTGATGCAATGCTTGCTTTGATGTTTTCTCTCACAAAACAGATAAATCTTGAGGAATAGA
GTGGATCCATGTCAACCTCATGTTCCACACCAAATTGAAGTATGGAATCTTCCTCTACTTTTTCTCATGAATGGGAAACTTTTCGACATCTGAAAATAGTTTGTTTTCCA
AGTGTTACAAAATATCCCTTGTTTCAAAAGTACATTTATGTTTTCACAAGCTACAATATTTCACCTACTTTTTGAATTTGGTATCGTGTATCATTCT
Protein sequenceShow/hide protein sequence
MSSIPFAKIKISPAAATSPAASAAGSAAASSSPAHSSVRFSASKPFVFTIRSSQTEGPIRRPAAPSLREPTPPPPSPPSQSPPYSAAAPVAQPAAKAKQENAITLEFQRQ
KAKELQEYFKQKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVVQVKILLSNFGIVDLD