; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015684 (gene) of Chayote v1 genome

Gene IDSed0015684
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor IBH1
Genome locationLG07:464294..465546
RNA-Seq ExpressionSed0015684
SyntenySed0015684
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3965.62Show/hide
Query:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR
        M SKS  T + S  S LRLARTFLRS+A IKSQ P I             S  EL+RRS+RIK+ AYSSMAR AGP+ AWARALLFKL+TRARHRTL+ R
Subjt:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR

Query:  RRLTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI-SHHLSTN
        RR     RSDD+VGKLRRL+PGGE MDVCTLLEET  +I CLS QVKVMKAI  H  STN
Subjt:  RRLTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI-SHHLSTN

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4872.5Show/hide
Query:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR
        M S+S  T MNS+ S LRLARTFLRS++RIKS+ P         TT  + SA EL+RRS+RIK+AAYSSMARVAGPQRAWARALLFKL TRARH TLMRR
Subjt:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR

Query:  RRLTL-GARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN
        RR T+  A  DD VGKLRRLLPGG+GMDVCTLLEETA +IHCLS QVKVM AI+HHLSTN
Subjt:  RRLTL-GARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]4.6e-4268.79Show/hide
Query:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR
        SKS+IT +NS  SR R ARTFLR ++RIKSQ          + T  ++   +LKR+S+RIK+ AYSSMARVAGP+RAWARALLFKLQTR RHRTLMRR+R
Subjt:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR

Query:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLST
               DDQVGKLRRLLPGGE MDVCTLLEETA++IHCLSTQVKVMKAIS  HLST
Subjt:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLST

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]4.0e-4670Show/hide
Query:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR
        M  +S IT MNS+ S LRLARTFLRS++RIKS+ P         TT  + SA EL+RRS+RIK+AAYSSMARVAGPQR WARALLFKL TRARHRT MRR
Subjt:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR

Query:  RRLTL-GARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN
        R  T+  A  DD VGKLRRL+PGG+GMDVCTLLEETA +IHCLS QVKVM AI+HHLS N
Subjt:  RRLTL-GARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN

XP_023548405.1 transcription factor IBH1 [Cucurbita pepo subsp. pepo]1.0e-3663.12Show/hide
Query:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR
        M SKS  T + S  + LRLARTFLRS+A IKSQ P I             S  ELKR+S+RIK+ AYSSMAR AGP+ AWARALLFKL+ RARHRTL+ R
Subjt:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR

Query:  RRLTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI-SHHLSTN
        RR      SDD+VGKLRRL+PGGE MDVC+LLEET  +I CL TQVKVMKAI  H  STN
Subjt:  RRLTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI-SHHLSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ3 Uncharacterized protein1.3e-3462.18Show/hide
Query:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR
        SKS+IT +NS  SRL  AR                     T+ T  ++   +LKR+S+RIK+AAYSSMARVAG +RAWARALLF+L TR RH+TLMRR+R
Subjt:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR

Query:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLS
              SDD VGKLRRLLPGGE MDVCTLLEETA++IHCLSTQVKVMKAIS HHLS
Subjt:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLS

A0A1S3CLD3 transcription factor IBH12.2e-4268.79Show/hide
Query:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR
        SKS+IT +NS  SR R ARTFLR ++RIKSQ          + T  ++   +LKR+S+RIK+ AYSSMARVAGP+RAWARALLFKLQTR RHRTLMRR+R
Subjt:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR

Query:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLST
               DDQVGKLRRLLPGGE MDVCTLLEETA++IHCLSTQVKVMKAIS  HLST
Subjt:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLST

A0A5D3BPL2 Transcription factor IBH12.2e-4268.79Show/hide
Query:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR
        SKS+IT +NS  SR R ARTFLR ++RIKSQ          + T  ++   +LKR+S+RIK+ AYSSMARVAGP+RAWARALLFKLQTR RHRTLMRR+R
Subjt:  SKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRR

Query:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLST
               DDQVGKLRRLLPGGE MDVCTLLEETA++IHCLSTQVKVMKAIS  HLST
Subjt:  LTLGARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAIS-HHLST

A0A6J1KS83 transcription factor IBH12.0e-4670Show/hide
Query:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR
        M  +S IT MNS+ S LRLARTFLRS++RIKS+ P         TT  + SA EL+RRS+RIK+AAYSSMARVAGPQR WARALLFKL TRARHRT MRR
Subjt:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR

Query:  RRLTL-GARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN
        R  T+  A  DD VGKLRRL+PGG+GMDVCTLLEETA +IHCLS QVKVM AI+HHLS N
Subjt:  RRLTL-GARSDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN

A0A7N2RCD6 Uncharacterized protein2.3e-2646.01Show/hide
Query:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR
        MT K    ++N+   +++ AR F+R+  +++   P+            +SS  E+++RS+RIK+AAYSSMA   G +RAW+RA+LFKL+ RARH  +MRR
Subjt:  MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR

Query:  RRLTLGARSDD------QVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLS
        R +      +D      Q  KLR+L+PGG+ MD+C+LLEETAH+I CLSTQVKVM+ I+ HLS
Subjt:  RRLTLGARSDD------QVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLS

SwissProt top hitse value%identityAlignment
Q01I07 Transcription factor IBH14.9e-1032.96Show/hide
Query:  SAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR-----RRLTLG
        +A ++  LA  FLR+ +RI    P                   + RR++ I+ AAYSSMAR A P+RAW+RALL + + R R RTLMRR     RR  + 
Subjt:  SAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR-----RRLTLG

Query:  ARSDD---------------------------------QVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI
        A +                                   +   LRRL+PGG GM+  +LLEETA ++  L  QV++M+ +
Subjt:  ARSDD---------------------------------QVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI

Q7XR02 Transcription factor IBH12.8e-1034.08Show/hide
Query:  SAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR-----RRLTLG
        +A ++  LA  FLR+ +RI    P                   + RR++ I+ AAYSSMAR A P+RAW+RALL +++ R R RTLMRR     RR  + 
Subjt:  SAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRR-----RRLTLG

Query:  ARSDD---------------------------QVGK------LRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI
        A +                             Q G+      LRRL+PGG GM+  +LLEETA ++  L  QV++M+ +
Subjt:  ARSDD---------------------------QVGK------LRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAI

Q9SKX1 Transcription factor IBH17.5e-1136.13Show/hide
Query:  PSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVA-GPQRAWARALLFKLQ---------TRARHRTLMRRRRL
        P +   A  FL+S + ++ QNP               +  +   R ++IK AAY SMAR A G  R W+RALL +           +R + +   +RRR 
Subjt:  PSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVA-GPQRAWARALLFKLQ---------TRARHRTLMRRRRL

Query:  TLGAR-SDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLS
           A   ++   +LR L+PGG GM+   L+EETAH+I CLS QVKVM+ +   LS
Subjt:  TLGAR-SDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLS

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 15.3e-1236.13Show/hide
Query:  PSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVA-GPQRAWARALLFKLQ---------TRARHRTLMRRRRL
        P +   A  FL+S + ++ QNP               +  +   R ++IK AAY SMAR A G  R W+RALL +           +R + +   +RRR 
Subjt:  PSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVA-GPQRAWARALLFKLQ---------TRARHRTLMRRRRL

Query:  TLGAR-SDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLS
           A   ++   +LR L+PGG GM+   L+EETAH+I CLS QVKVM+ +   LS
Subjt:  TLGAR-SDDQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCAAATCAAGTATAACCTCAATGAATTCAGCACCCTCTCGGCTCCGATTAGCTCGAACCTTCCTCCGATCCTACGCTAGGATCAAATCCCAAAACCCCACGAT
TGCCACCGCCACCGCCACCACTACCACCACGGTTACTTCGTCTGCTTCGGAGCTCAAACGTCGAAGCAAACGGATAAAAGTGGCAGCATACTCTTCCATGGCTCGCGTGG
CCGGGCCACAGAGGGCCTGGGCTAGAGCCCTACTCTTCAAGCTCCAGACTCGAGCCAGACATAGGACTTTGATGAGACGACGCCGCTTGACGCTGGGTGCCCGCTCGGAT
GACCAGGTGGGGAAGCTGCGGCGCCTGCTGCCGGGTGGTGAGGGAATGGATGTTTGCACCTTGCTGGAGGAAACTGCACACTTCATCCATTGCCTGTCCACACAGGTTAA
GGTCATGAAAGCCATCTCTCATCACTTGTCAACCAATTGA
mRNA sequenceShow/hide mRNA sequence
CTCAATATGATCAACATAAACAAAAGTGATTAATATTAAATTAAAAAAAAACCATTTGATTCTAAAACCCCAAAATTCTCCATAGCCATCCAATTTCAATCCCCTTATTC
CTTCTCCTATTGTTTGATCCCTTTATCTCTCTTAAATTATTTGTAGTGTTAGAGAGAGAAAATCTGTGTTTTTAAGCTTTGTAGTGCTTGTGTGATCAATCAAACCCCTT
ATTATAATTTGTGTTTCAACTCAAGTTTTTTCCTTTTGTCCTTCCAAGCAAGAGGCCCCTTTGTGTCAGAAACAAAACCACAAAAAAAAAAAAAAAAATCTCCAACTTCC
AATCTCTGTTCTTCCATTTGTCTCTCTCTCTCTCTTCAAAAAGATTTGTTGTGTCAGAGTTAGTTGTACTAGGAATTCAAGATCTCTCCTTCTCTCTCTACCAAACTTAT
ATATTTTCTCTCTTGATTTCATCTTCATCCTTCTTCCTCTTCATCCATGACTTCCAAATCAAGTATAACCTCAATGAATTCAGCACCCTCTCGGCTCCGATTAGCTCGAA
CCTTCCTCCGATCCTACGCTAGGATCAAATCCCAAAACCCCACGATTGCCACCGCCACCGCCACCACTACCACCACGGTTACTTCGTCTGCTTCGGAGCTCAAACGTCGA
AGCAAACGGATAAAAGTGGCAGCATACTCTTCCATGGCTCGCGTGGCCGGGCCACAGAGGGCCTGGGCTAGAGCCCTACTCTTCAAGCTCCAGACTCGAGCCAGACATAG
GACTTTGATGAGACGACGCCGCTTGACGCTGGGTGCCCGCTCGGATGACCAGGTGGGGAAGCTGCGGCGCCTGCTGCCGGGTGGTGAGGGAATGGATGTTTGCACCTTGC
TGGAGGAAACTGCACACTTCATCCATTGCCTGTCCACACAGGTTAAGGTCATGAAAGCCATCTCTCATCACTTGTCAACCAATTGATATATCATAAGAGAAAGCTTAAGT
TGCACAAACAAAACAAGAGAGATTTCATAATTACCCTTTTCTCTTTTCTTGATCCATGCATATATAAAAAGCATTATACAGAGATTTTAGAAGAATATAAACATATATAA
TATTTGAGCATGCATTGGGGTGGGGATTCTTGAAAAAGGCCAGTTTTTGTAAACTCTCTCTCTTATTCCTTTTTTTTTTTTTTTTGTGTGTGTGTGTATATAAAAGAACC
ATCTTTTTTCATGATATTGATAAATCTGAAGAACCCTTTTGTT
Protein sequenceShow/hide protein sequence
MTSKSSITSMNSAPSRLRLARTFLRSYARIKSQNPTIATATATTTTTVTSSASELKRRSKRIKVAAYSSMARVAGPQRAWARALLFKLQTRARHRTLMRRRRLTLGARSD
DQVGKLRRLLPGGEGMDVCTLLEETAHFIHCLSTQVKVMKAISHHLSTN