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Sed0015693 (gene) of Chayote v1 genome

Gene IDSed0015693
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG13:21169818..21170108
RNA-Seq ExpressionSed0015693
SyntenySed0015693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608573.1 hypothetical protein SDJN03_01915, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2669.47Show/hide
Query:  MGAVTLTSVVRSLFVGIILLAIITAIFETAAASRLLPPLRAAPSTTPHGGIHESQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHEVE
        M  VTL S + SLF G++   IITA+ +TAA SRLL PL AAPSTTPH GIHES+ K DH+RFKV SEI ADYGYWNP PVFGGGYA P+PHEV+
Subjt:  MGAVTLTSVVRSLFVGIILLAIITAIFETAAASRLLPPLRAAPSTTPHGGIHESQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHEVE
PON91008.1 Transmembrane protein [Trema orientale]2.3e-0442.42Show/hide
Query:  TLTSVVRSLFVGIILLAIITAIFETAAASR--LLPPLRA-APSTTPHGGIHE--SQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHE--VEE
        T +SV  +L V I+++ I+T +  TAAA +  LLP   A +PS+     I +   +++E+HN F    E   DYG+WNP P FGGG+A P+PH   VEE
Subjt:  TLTSVVRSLFVGIILLAIITAIFETAAASR--LLPPLRA-APSTTPHGGIHE--SQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHE--VEE
TrEMBL top hitse value%identityAlignment
A0A2P5EZP1 Transmembrane protein1.1e-0442.42Show/hide
Query:  TLTSVVRSLFVGIILLAIITAIFETAAASR--LLPPLRA-APSTTPHGGIHE--SQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHE--VEE
        T +SV  +L V I+++ I+T +  TAAA +  LLP   A +PS+     I +   +++E+HN F    E   DYG+WNP P FGGG+A P+PH   VEE
Subjt:  TLTSVVRSLFVGIILLAIITAIFETAAASR--LLPPLRA-APSTTPHGGIHE--SQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHE--VEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28375.1 unknown protein2.9e-0554.05Show/hide
Query:  FKVQS-----EIEADYGYWNPNPVFGGG--YAGPVPH
        F+V+S     ++  DYG+WNP+PV+GGG  Y GPVPH
Subjt:  FKVQS-----EIEADYGYWNPNPVFGGG--YAGPVPH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAGTGACACTTACCTCGGTTGTTCGCTCTTTATTCGTCGGCATAATACTGCTTGCTATAATAACAGCTATATTCGAAACAGCTGCAGCATCACGTTTACTACC
ACCATTACGAGCTGCACCTTCAACAACTCCTCATGGCGGCATCCATGAATCTCAGGAGAAGGAAGATCACAATCGCTTCAAGGTTCAGTCAGAAATCGAGGCTGACTATG
GCTACTGGAATCCGAACCCCGTGTTTGGGGGAGGATATGCAGGCCCCGTTCCCCATGAGGTCGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCAGTGACACTTACCTCGGTTGTTCGCTCTTTATTCGTCGGCATAATACTGCTTGCTATAATAACAGCTATATTCGAAACAGCTGCAGCATCACGTTTACTACC
ACCATTACGAGCTGCACCTTCAACAACTCCTCATGGCGGCATCCATGAATCTCAGGAGAAGGAAGATCACAATCGCTTCAAGGTTCAGTCAGAAATCGAGGCTGACTATG
GCTACTGGAATCCGAACCCCGTGTTTGGGGGAGGATATGCAGGCCCCGTTCCCCATGAGGTCGAAGAATGA
Protein sequenceShow/hide protein sequence
MGAVTLTSVVRSLFVGIILLAIITAIFETAAASRLLPPLRAAPSTTPHGGIHESQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHEVEE