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Sed0015724 (gene) of Chayote v1 genome

Gene IDSed0015724
OrganismSechium edule (Chayote v1)
DescriptionSpindle pole body-associated protein
Genome locationLG05:225946..227525
RNA-Seq ExpressionSed0015724
SyntenySed0015724
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011228.1 hypothetical protein SDJN02_26131 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6276.97Show/hide
Query:  VPLFLATSLRSHHFASTQTPLSNLVASSQ---IAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT
        V LFLATSLRSHHF STQT LSN  ASSQ     PKC++FRRKS+VFGKQS + +E SQFLDE+G V+DMDGYLN  S EYDSVWDTKPSWCQPWTITLT
Subjt:  VPLFLATSLRSHHFASTQTPLSNLVASSQ---IAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT

Query:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        GSLVIASSW +IKSI VT V+L+ I  WWYIFLYSYPKAY+DMIAERR+ V+DGVEDTFGVKRT+
Subjt:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

XP_022145927.1 uncharacterized protein LOC111015275 [Momordica charantia]3.2e-6577.71Show/hide
Query:  MGAVSPVAVPLFLATSLRSHHF--ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPS
        MGA+S   VPLFLATSLRSHHF   STQT L+N VA+SQ+    P+C+KFRRK++VFGKQS +ANE SQFLDE+GVVDDMDGYLN LSLEYDSVWDTKPS
Subjt:  MGAVSPVAVPLFLATSLRSHHF--ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPS

Query:  WCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        WCQPWTITLTG L+ ASSWF+IKSI VT VILS I LWWYIFLYSYPKAYS+MIAERRK VTDG EDTFGV++T+
Subjt:  WCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

XP_022963485.1 uncharacterized protein LOC111463803 [Cucurbita moschata]1.5e-6276.36Show/hide
Query:  VPLFLATSLRSHHFASTQTPLSNLVASSQ---IAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT
        V LFLATSLRSHHF STQT LSN  ASSQ     PKC++FRRKS+VFGKQS + +E SQFLDE+G V+DMDGYLN  S EYDSVWDTKPSWCQPWT+TLT
Subjt:  VPLFLATSLRSHHFASTQTPLSNLVASSQ---IAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT

Query:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        GSLVIASSW +IKSI VT V+L+ I  WWYIFLYSYPKAY+DMIAERR+ V+DGVEDTFGVKRT+
Subjt:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]1.7e-6377.58Show/hide
Query:  VPLFLATSLRSHHFASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT
        V LFLATSLRSHHF STQT LSN  ASSQ+    PKC++FRRKS+VFGKQS + +E SQFLDE+G V+DMDGYLN  S EYDSVWDTKPSWCQPWTITLT
Subjt:  VPLFLATSLRSHHFASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT

Query:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        GSLVIASSW +IKSI VT V+L+ I  WWYIFLYSYPKAYSDMIAERR+ V+DGVEDTFGVKRT+
Subjt:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]2.5e-6276.36Show/hide
Query:  VPLFLATSLRSHHFASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT
        V LFLATSLRSHHF STQT LSN  ASSQ+    PKC++FRRKS+VFGKQS + +E SQFLDE+G V+DMDGYLN  S EYDSVWDTKPSWCQPWTITLT
Subjt:  VPLFLATSLRSHHFASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT

Query:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        G LVIASSW +IKSI VT V+L+ I  WWYIFLYSYPKAY+DMIAERR+ V+DGVEDTFGVKRT+
Subjt:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

TrEMBL top hitse value%identityAlignment
A0A0A0KED9 Uncharacterized protein6.3e-5972.41Show/hide
Query:  MGAVSPVAVPLFLATSLRSHHF-ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSW
        MGAVSP     FLA+SLR + F +STQT LSN  ASSQ+    P C+KFR K++VFGKQSG+ N+ SQFLDE+GVV+DMDGYLN  S EYDSVWDTKP+W
Subjt:  MGAVSPVAVPLFLATSLRSHHF-ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSW

Query:  CQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        CQPWTITLTG LVIASSW  IKSI VT VIL+ I LWWYIFLYSYPKAYS+MIAERR+ V+DG+EDTFGVKRT+
Subjt:  CQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X11.1e-5874.25Show/hide
Query:  AVPLFLATSLRSHHF-ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTIT
        A+ L LATSL S+HF +STQT LSN  ASSQ+    PKC+KFR K++VFGKQS   N+ SQFLDE+GVVDDMDGYLN  S EYDSVWDTKPSWCQPWTIT
Subjt:  AVPLFLATSLRSHHF-ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        LTG LVIASSW  IKS+ VT VIL+ I LWWYIFLYSYPKAYS+MIAERR+ V+DG+EDTFGVKRT+
Subjt:  LTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

A0A6J1CY32 uncharacterized protein LOC1110152751.5e-6577.71Show/hide
Query:  MGAVSPVAVPLFLATSLRSHHF--ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPS
        MGA+S   VPLFLATSLRSHHF   STQT L+N VA+SQ+    P+C+KFRRK++VFGKQS +ANE SQFLDE+GVVDDMDGYLN LSLEYDSVWDTKPS
Subjt:  MGAVSPVAVPLFLATSLRSHHF--ASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPS

Query:  WCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        WCQPWTITLTG L+ ASSWF+IKSI VT VILS I LWWYIFLYSYPKAYS+MIAERRK VTDG EDTFGV++T+
Subjt:  WCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

A0A6J1HI50 uncharacterized protein LOC1114638037.2e-6376.36Show/hide
Query:  VPLFLATSLRSHHFASTQTPLSNLVASSQ---IAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT
        V LFLATSLRSHHF STQT LSN  ASSQ     PKC++FRRKS+VFGKQS + +E SQFLDE+G V+DMDGYLN  S EYDSVWDTKPSWCQPWT+TLT
Subjt:  VPLFLATSLRSHHFASTQTPLSNLVASSQ---IAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT

Query:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        GSLVIASSW +IKSI VT V+L+ I  WWYIFLYSYPKAY+DMIAERR+ V+DGVEDTFGVKRT+
Subjt:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

A0A6J1HWP2 uncharacterized protein LOC1114669708.5e-6477.58Show/hide
Query:  VPLFLATSLRSHHFASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT
        V LFLATSLRSHHF STQT LSN  ASSQ+    PKC++FRRKS+VFGKQS + +E SQFLDE+G V+DMDGYLN  S EYDSVWDTKPSWCQPWTITLT
Subjt:  VPLFLATSLRSHHFASTQTPLSNLVASSQI---APKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLT

Query:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE
        GSLVIASSW +IKSI VT V+L+ I  WWYIFLYSYPKAYSDMIAERR+ V+DGVEDTFGVKRT+
Subjt:  GSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02725.1 unknown protein2.7e-3865.71Show/hide
Query:  ESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGV
        + S+F+DE GVVDDM+G+L+ LSLEYDSVWDTKPSWCQPWTI LTG  ++A SW I+ S++V+ + +  I  WWYIFLYSYPK+YS+MIAERRK V DG 
Subjt:  ESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGV

Query:  EDTFG
        ED +G
Subjt:  EDTFG

AT4G02725.2 unknown protein1.1e-2865.06Show/hide
Query:  ESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPK
        + S+F+DE GVVDDM+G+L+ LSLEYDSVWDTKPSWCQPWTI LTG  ++A SW I+ S++V+ + +  I  WWYIFLYSYPK
Subjt:  ESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLTGSLVIASSWFIIKSIVVTGVILSFISLWWYIFLYSYPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCGTTTCTCCTGTTGCTGTTCCTCTCTTCCTTGCAACTTCTCTACGATCCCACCATTTCGCTTCAACACAAACCCCTCTTTCTAACTTGGTGGCTTCTTCACA
AATCGCTCCCAAATGTTCGAAATTCCGCAGGAAAAGTATCGTTTTCGGGAAGCAATCTGGAAGCGCCAATGAATCTTCTCAGTTCTTAGACGAAGATGGAGTCGTCGACG
ATATGGATGGATACTTGAATCGCCTCTCCCTCGAATATGACTCCGTTTGGGATACAAAGCCCTCATGGTGTCAACCATGGACTATAACGCTGACAGGATCTCTAGTGATT
GCATCTAGCTGGTTTATTATAAAGTCGATAGTAGTGACTGGAGTAATACTCTCATTCATATCCTTATGGTGGTACATCTTTCTTTACTCATATCCAAAGGCTTATTCCGA
CATGATTGCGGAGCGAAGAAAAAATGTTACTGATGGTGTGGAAGACACATTTGGCGTGAAAAGGACAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCGTTTCTCCTGTTGCTGTTCCTCTCTTCCTTGCAACTTCTCTACGATCCCACCATTTCGCTTCAACACAAACCCCTCTTTCTAACTTGGTGGCTTCTTCACA
AATCGCTCCCAAATGTTCGAAATTCCGCAGGAAAAGTATCGTTTTCGGGAAGCAATCTGGAAGCGCCAATGAATCTTCTCAGTTCTTAGACGAAGATGGAGTCGTCGACG
ATATGGATGGATACTTGAATCGCCTCTCCCTCGAATATGACTCCGTTTGGGATACAAAGCCCTCATGGTGTCAACCATGGACTATAACGCTGACAGGATCTCTAGTGATT
GCATCTAGCTGGTTTATTATAAAGTCGATAGTAGTGACTGGAGTAATACTCTCATTCATATCCTTATGGTGGTACATCTTTCTTTACTCATATCCAAAGGCTTATTCCGA
CATGATTGCGGAGCGAAGAAAAAATGTTACTGATGGTGTGGAAGACACATTTGGCGTGAAAAGGACAGAGTAA
Protein sequenceShow/hide protein sequence
MGAVSPVAVPLFLATSLRSHHFASTQTPLSNLVASSQIAPKCSKFRRKSIVFGKQSGSANESSQFLDEDGVVDDMDGYLNRLSLEYDSVWDTKPSWCQPWTITLTGSLVI
ASSWFIIKSIVVTGVILSFISLWWYIFLYSYPKAYSDMIAERRKNVTDGVEDTFGVKRTE