; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015730 (gene) of Chayote v1 genome

Gene IDSed0015730
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S10-1-like
Genome locationLG13:6310649..6313447
RNA-Seq ExpressionSed0015730
SyntenySed0015730
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16623.1 40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]4.3e-9296.17Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        +IISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

XP_004146529.1 40S ribosomal protein S10-1 [Cucumis sativus]5.1e-9397.27Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

XP_008452010.1 PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]1.5e-9296.72Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

XP_022985005.1 40S ribosomal protein S10-1-like [Cucurbita maxima]2.5e-9296.72Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

XP_038895822.1 40S ribosomal protein S10-1-like [Benincasa hispida]4.3e-9296.72Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERR  GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ3 S10_plectin domain-containing protein2.5e-9397.27Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

A0A1S3BST3 40S ribosomal protein S10-1-like7.2e-9396.72Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

A0A5D3CXK7 40S ribosomal protein S10-1-like2.1e-9296.17Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        +IISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

A0A6J1J0T0 40S ribosomal protein S10-1-like3.6e-9296.17Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA  SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

A0A6J1JA51 40S ribosomal protein S10-1-like1.2e-9296.72Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDRPRGPPRFEGGERRF GDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-14.3e-7178.57Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV YAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFG-GPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAESS
         FG GP GDRPRGPPRFEG   RF GDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G   SS
Subjt:  GFG-GPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAESS

P0DKK9 40S ribosomal protein S10-24.3e-7178.57Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV YAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFG-GPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAESS
         FG GP GDRPRGPPRFEG   RF GDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G   SS
Subjt:  GFG-GPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAESS

Q9FFS8 40S ribosomal protein S10-21.9e-6679.03Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RGFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAESSNLP
        R FGG  GDRPRGPPR + GERRF GDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  S+LP
Subjt:  RGFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAESSNLP

Q9LTF2 40S ribosomal protein S10-32.2e-7078.14Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDR RG PR EGG+R   GDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A   S LP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

Q9SW09 40S ribosomal protein S10-11.5e-7177.05Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDR RGPPR +G   RF GDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A   S  P
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein1.1e-7277.05Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDR RGPPR +G   RF GDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A   S  P
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein1.1e-5865.03Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP G                                  G +KGGAPAD++PSF G GGRPGFGRGAG Y   A   S  P
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein1.3e-6779.03Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RGFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAESSNLP
        R FGG  GDRPRGPPR + GERRF GDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  S+LP
Subjt:  RGFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAESSNLP

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein1.2e-4779.29Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRGFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDK
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GR FGG  GDRPRGPPR + GERRF GDRDGYRGGP+  GGE+ GDK
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRGFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDK

Query:  GGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAESSNLP
         GAPADY+P F GG GG R GFGRGAG +GGGAA  S+LP
Subjt:  GGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAESSNLP

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein1.5e-7178.14Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP
         FGGP GDR RG PR EGG+R   GDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A   S LP
Subjt:  GFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATTTCAGAGAAGAACCGCAGGGAGATCTCCAAGTACCTCTTTCAAGAGGGGGTTTGTTATGCCAAGAAGGATTACAATTTGGCCAAGCACCCAGATATCGATGT
GCCCAATTTGCAGGTTATTAAGCTGATGCAGAGCTTCAAGTCTAAGGAATACGTGCGCGAGACGTTTGCTTGGATGCATTACTACTGGTATCTCACCAATGATGGCATTG
AGTTCCTTAGGACTTACCTCAATCTCCCTTCTGAAATTGTCCCTGCTACCCTGAAGAAACAAGCTAAGCCTGCTGGCAGAGGCTTCGGCGGCCCTTCTGGTGATCGCCCA
CGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGCGAGTTTGGCGGCGATAAGGGAGG
AGCTCCAGCTGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGGTTCGGCCGTGGAGCTGGTAGCTATGGTGGAGGAGCTGCTGAAAGCTCAAACCTTCCTT
GA
mRNA sequenceShow/hide mRNA sequence
TTACAGATCAATTCTTCTCATTCTTCACTCCTCTAGCTTGAGCCGCTGCTGTATTCCATATTCTTGCTCATCTTCAACCATGATTATTTCAGAGAAGAACCGCAGGGAGA
TCTCCAAGTACCTCTTTCAAGAGGGGGTTTGTTATGCCAAGAAGGATTACAATTTGGCCAAGCACCCAGATATCGATGTGCCCAATTTGCAGGTTATTAAGCTGATGCAG
AGCTTCAAGTCTAAGGAATACGTGCGCGAGACGTTTGCTTGGATGCATTACTACTGGTATCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTC
TGAAATTGTCCCTGCTACCCTGAAGAAACAAGCTAAGCCTGCTGGCAGAGGCTTCGGCGGCCCTTCTGGTGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGA
GGAGGTTTGGTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGCGAGTTTGGCGGCGATAAGGGAGGAGCTCCAGCTGATTACAGGCCTTCTTTTGGG
GGTCCTGGTGGAAGACCGGGGTTCGGCCGTGGAGCTGGTAGCTATGGTGGAGGAGCTGCTGAAAGCTCAAACCTTCCTTGAAAAAAAATGGTCGTACCAGCAGTATAATG
AAATTTTCTTTGAAATGACTTAGCAGCTTGATCGGAGAGTTTGTTAACTTCTTTTTTCTCCTTTATTTAGCTTTATAAATTAAAATTGTCATTGTGCAAATTGAAGCTAC
TGGAACCACTTTGCAAGTAAAATTTTTGTTTTCTCTATGAACGGCTAAGTACTATTCTTTCCCAATGAGCAAGAATGATATTTTAGTTTTTCAAAGTTACCGTCA
Protein sequenceShow/hide protein sequence
MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRGFGGPSGDRP
RGPPRFEGGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAESSNLP