; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015736 (gene) of Chayote v1 genome

Gene IDSed0015736
OrganismSechium edule (Chayote v1)
Descriptiontransmembrane protein 50A
Genome locationLG03:5120695..5124440
RNA-Seq ExpressionSed0015736
SyntenySed0015736
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007919 - Uncharacterised protein family UPF0220


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140320.1 transmembrane protein 50A [Cucumis sativus]4.5e-7097.78Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_008460472.1 PREDICTED: transmembrane protein 50A [Cucumis melo]1.2e-7098.52Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022141734.1 transmembrane protein 50A [Momordica charantia]5.8e-7097.04Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022993057.1 transmembrane protein 50A [Cucurbita maxima]2.6e-7097.78Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_038874577.1 transmembrane protein 50A [Benincasa hispida]9.0e-7198.52Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

TrEMBL top hitse value%identityAlignment
A0A1S3CCJ8 transmembrane protein 50A5.7e-7198.52Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1CJN8 transmembrane protein 50A2.8e-7097.04Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1FCW9 transmembrane protein 50A-like6.3e-7097.04Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFAS AALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1JKY2 transmembrane protein 50A-like2.4e-6997.04Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTG S WTGVAGVLQCVFVLVSGLIYWTSH+E
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1JRP9 transmembrane protein 50A1.3e-7097.78Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+WSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

SwissProt top hitse value%identityAlignment
O95807 Transmembrane protein 50A9.2e-1031.75Show/hide
Query:  AGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSV
        AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E   G+   ++WLF  ++++F SL AS+ +L    V K    V
Subjt:  AGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSV

Query:  WTGVAGVLQCVFVLVSGLIYWTSHSE
        + G+A   Q  F+   GL++    +E
Subjt:  WTGVAGVLQCVFVLVSGLIYWTSHSE

P56557 Transmembrane protein 50B7.3e-0730.71Show/hide
Query:  VAGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPS
        VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ +L   + V     
Subjt:  VAGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPS

Query:  VWTGVAGVLQCVFVLVSGLIYWTSHSE
        V+ G+A   Q   +  S LIY    +E
Subjt:  VWTGVAGVLQCVFVLVSGLIYWTSHSE

Q3SZL9 Transmembrane protein 50B7.3e-0730.71Show/hide
Query:  VAGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPS
        VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ +L   + V     
Subjt:  VAGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPS

Query:  VWTGVAGVLQCVFVLVSGLIYWTSHSE
        V+ G+A   Q   +  S LIY    +E
Subjt:  VWTGVAGVLQCVFVLVSGLIYWTSHSE

Q54T60 Transmembrane protein 50 homolog1.7e-0825.76Show/hide
Query:  PGVAGAVFGAGWWFWVDAVVCSSV----------AVSFLHYLPGIFASFAALMFNCVRKEDIDYSP--YEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQ
        P +AG +F AGW+ W+D  V  +            + +++YLPGIFA+   +M N V    ++ +   ++ G  ++++WLF ++ +SF  + A++ +++ 
Subjt:  PGVAGAVFGAGWWFWVDAVVCSSV----------AVSFLHYLPGIFASFAALMFNCVRKEDIDYSP--YEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQ

Query:  DSVV---KTGPSVWTGVAGVLQCVFVLVSGLI
          +        + W G+A  LQ   + +S L+
Subjt:  DSVV---KTGPSVWTGVAGVLQCVFVLVSGLI

Q9CXL1 Transmembrane protein 50A5.4e-1030.71Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        MD  E  +      AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E   G+   ++WLF  ++++F SL AS+ 
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L    V K    V+ G+A   Q  F+   GL++    +E
Subjt:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Arabidopsis top hitse value%identityAlignment
AT1G36980.1 unknown protein9.9e-6886.67Show/hide
Query:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAE+W+IFGPG +GAVFG GWWFWVDAVVCSS+ V F+HYLPGIFAS  ALMFNCVRKEDIDYSPY+EGEWRLKLWLF AYVV+FVSLAASVGLLIQD
Subjt:  MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPS WTGVAGV QCVFVL+SGL+YWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGCGGAGGTGTGGTCAATTTTCGGGCCAGGCGTCGCCGGAGCTGTGTTCGGCGCCGGATGGTGGTTCTGGGTGGACGCCGTCGTCTGCAGTTCCGTTGCCGT
CTCCTTCCTCCACTACCTTCCAGGTATTTTTGCTTCATTTGCGGCTCTGATGTTCAATTGCGTTCGGAAAGAGGACATTGATTATTCTCCATACGAGGAGGGCGAATGGA
GATTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTGTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCTGTAGTAAAAACTGGTCCATCAGTGTGG
ACGGGAGTCGCAGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAGTGGGCTGATTTACTGGACTTCTCACTCGGAATAA
mRNA sequenceShow/hide mRNA sequence
CAAATAACTATCCAAAATATACTTTTTAAAAACAATTGATCAAATAATTCACACCAGCCTCTCCGAATCCATCTGTGTCGCAAAAGGAAGAATCCCTAGAAATGGATTTG
GCGGAGGTGTGGTCAATTTTCGGGCCAGGCGTCGCCGGAGCTGTGTTCGGCGCCGGATGGTGGTTCTGGGTGGACGCCGTCGTCTGCAGTTCCGTTGCCGTCTCCTTCCT
CCACTACCTTCCAGGTATTTTTGCTTCATTTGCGGCTCTGATGTTCAATTGCGTTCGGAAAGAGGACATTGATTATTCTCCATACGAGGAGGGCGAATGGAGATTGAAGC
TTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTGTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCTGTAGTAAAAACTGGTCCATCAGTGTGGACGGGAGTC
GCAGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAGTGGGCTGATTTACTGGACTTCTCACTCGGAATAAGTTGGAAAAAAATATGCACTTGAACCTCAAGGGCTGAAGAG
TAACCAAAACCGCATCGAGAGCTGCAGCGCATTGCAGTATCGTGTCATTTGTGTATCATTTGACTTTGGAACTTTTCCAATCATAGAACTGAACAGAAAGTGTTATTTTA
CTTCATGTAAATGTTGTGTTAATCTTGAGCTGAAACCATGTCCATATATCTTTATGAATTCAATATATTCAATGTTCCAGACTTTGTTCATCTCATTTACTTAGAAAGCA
TAAATGATGCAGGGTAGTTGGTTAGCTTTGCTTTGTTTTTTAGTTTTTTCTTCAAAAACTTGTGGATGTAAAATCAAAGAAGCAG
Protein sequenceShow/hide protein sequence
MDLAEVWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVW
TGVAGVLQCVFVLVSGLIYWTSHSE