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Sed0015743 (gene) of Chayote v1 genome

Gene IDSed0015743
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:38905430..38909191
RNA-Seq ExpressionSed0015743
SyntenySed0015743
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583910.1 hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2676.4Show/hide
Query:  RRLSMDEEQGSKKSKSHGN---RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        + +SMDEE G+K+SK HG+    WAIFKRSLRRES KMKLLGSAF WKRLT+LQISF DNLLFKIVSM E VVLV  LCFF LCFGCHF
Subjt:  RRLSMDEEQGSKKSKSHGN---RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

KAG7012520.1 hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-1978.57Show/hide
Query:  MDEEQGSKKSKSHGN---RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVL
        MDE+ G+K SKSHGN   RWAIFKRSLRRESRKMKLLGSAF WKRLT+LQISF DN+LFK VS+ E VVL
Subjt:  MDEEQGSKKSKSHGN---RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVL

KAG7019527.1 hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1970.59Show/hide
Query:  RRLSMDEEQGSKKSKSHGN---RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLV-----LRLCF
        + +SMDEE G+K+SK HG+    WAIFKRSLRRESRKMKLLGSAF WKRLT+LQISF DNLLFKIVSM E VVL+     L LC+
Subjt:  RRLSMDEEQGSKKSKSHGN---RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLV-----LRLCF

XP_017978435.1 PREDICTED: uncharacterized protein LOC18596529 [Theobroma cacao]1.9e-1158.21Show/hide
Query:  RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        RW +FKR +++ES + K LGSAF WKRL ++Q+SF D++LF+I S+ EA+ LV  LCFF LC GCHF
Subjt:  RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

XP_030972441.1 uncharacterized protein LOC115992393 [Quercus lobata]1.9e-1160.29Show/hide
Query:  NRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        NRW  FKR   + + + K LGSAF WKRL +LQ+SF D++LF+I+S+FEA+VLV  LCFF LC GCHF
Subjt:  NRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

TrEMBL top hitse value%identityAlignment
A0A061GEB5 Uncharacterized protein1.2e-1147.67Show/hide
Query:  RRLSMDEEQGSKKSKSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        +R     ++  K+      RW +FKR +++ES + K LGSAF WKRL ++Q+SF D++LF+I S+ EA+ LV  LCFF LC GCHF
Subjt:  RRLSMDEEQGSKKSKSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

A0A067GHI9 Uncharacterized protein4.6e-1161.11Show/hide
Query:  KSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        K    RW +FKR ++RES + K LG    WKRL +LQISF D++LFKIVS+FEAVVLV   CFF LC GCHF
Subjt:  KSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

A0A6J1B6L1 uncharacterized protein LOC1104245719.2e-1258.21Show/hide
Query:  RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        RW +FKR +++ES + K LGSAF WKRL ++Q+SF D++LF+I S+ EA+ LV  LCFF LC GCHF
Subjt:  RWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

A0A7N2LSF8 Uncharacterized protein9.2e-1260.29Show/hide
Query:  NRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        NRW  FKR   + + + K LGSAF WKRL +LQ+SF D++LF+I+S+FEA+VLV  LCFF LC GCHF
Subjt:  NRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

V4UFE9 Uncharacterized protein4.6e-1161.11Show/hide
Query:  KSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        K    RW +FKR ++RES + K LG    WKRL +LQISF D++LFKIVS+FEAVVLV   CFF LC GCHF
Subjt:  KSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46295.1 unknown protein5.7e-0643.08Show/hide
Query:  AIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF
        +I+K +  R   K   LG    WKRL +L+++F + L ++I+S+ EA+VLV +L FF LC GC F
Subjt:  AIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTCCCCAATTTCTTCCGAAGATTATCGATGGACGAAGAACAGGGTTCGAAGAAAAGCAAGAGCCATGGAAATCGGTGGGCCATTTTCAAGCGATCTCTGAGGAG
AGAATCGCGAAAAATGAAGCTATTGGGCTCGGCGTTCAACTGGAAGCGACTGACCCATCTGCAGATTTCTTTTAGGGATAATTTGCTTTTCAAGATTGTTTCTATGTTTG
AGGCTGTAGTTCTTGTTCTCAGGCTCTGTTTCTTCTTGCTCTGTTTTGGATGTCACTTTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTTACCTCCGCTCCGTAGAACAGTAATTTGTCTCCCACTAAGCCACTAAAATTCTCATAGTAAATTACATAAAAGCCCTCCATCTAACACCAAATTTCCTTTCTCGTG
CCACCCATCCCATTTATAAACCGAAACGGTCACAGATTTCAACACACAGCAAAAACCCAACCAATTTTCAGGTCCCAACAAAACCCAGAAAACACACACGTTCAAACTCC
ACAGCCTTTATTTTCAACTTCGAATGTATTTCCCCAATTTCTTCCGAAGATTATCGATGGACGAAGAACAGGGTTCGAAGAAAAGCAAGAGCCATGGAAATCGGTGGGCC
ATTTTCAAGCGATCTCTGAGGAGAGAATCGCGAAAAATGAAGCTATTGGGCTCGGCGTTCAACTGGAAGCGACTGACCCATCTGCAGATTTCTTTTAGGGATAATTTGCT
TTTCAAGATTGTTTCTATGTTTGAGGCTGTAGTTCTTGTTCTCAGGCTCTGTTTCTTCTTGCTCTGTTTTGGATGTCACTTTTGAATTCGGATTCTGCTTGTTTTCTACT
TATCGTTTCTGAAATTCTTTGTTCATGATTCTGGGTGTTTCTGTTTGTTTTTTAATCGATATGTGAAATTTGGGATCATCTTAGAGTAGTAATTGAGGGCTCAAATGTAG
ACATTAAAGTAATGAAAACTGTATATTGCAAAATTTAAAAAAACAAAAAATCAAATGGTTAAGAAACGGGACTGGTTCTTGTGGTGAGATTTTATGATGGGGTGAACTTG
GTTTAATTTGATCTCGGAAATTATTGATGAATGGGCATTTAAGCTTGATCGTTGTTGGCTGTAGAGTTAATTTCTTGATGGAGGTATAAGAAATGGACGATTGGTTCATT
TTAGTGAAGAAAACTTAGCAGGGGAACAGGTTACCGGATTTTTCGTCGGAGATTTGGATTTTCCAATTGAGGCGCCGGCGGCCGAGTCTTCTTCTCCGGTGAGGATAAGT
GACTCGGGTCTCAGCTGAGTTTGGTTTTCAGAAAATAGTGTGATTTGCAAAAGTTGAAACGGATATTTTTTTGAACTGTATGGTAATAGAGACCTTGGAATCTGATTCGG
TTTCTTTTCTTTTCTTGGAATTTTTTAATTAGTCAGTATGTTTTAATTAATTTTATAATGTATAAAGATTGCATTGCATATTGATATTAGTTTAAATTACAGGCTTTTTT
TTTATATAGAAAATAATAGGTTTTTTTTTTTAGCACATAGTGGGGGAGGGAGACCAACAAACCGTACATAGAGGCACAACTGCTCTAAAATAATATGAGAGTTAAATACC
GATTTTCGGATTCGAACTCGTGATCGTAGAGTTGAAATTGATTAACACCAGACAGGATAAGTGACTCGGGTCTCAACTGACGTGGGGGGATAGGTTTTTTTTCTAAAGCA
TAAGTTTTTGGTGTTATTTTGTATTATTATTATTTGAACTTGAAAATTATTGATTATTAAGTCGCACAAAGTGGGGCGAATACTTGGGAGGGTCCGTTAACTGTGATACT
TATCACATAACGGATCCTAAAGCAGATGGACTTGGTGTATCTTCATGCATCTTGAACTGCCTTGAAGATGCAGGCGTATCGCCAAAGGAGGTAACTCAATCTGATCTATA
TATTCTGTTTCTTGGTATTGTTTCTGTTGATAATACTCAAAGATTAAAGCTCCAATTAGGAAGTCAATTTCTGAAGTTAATGCTGCTATAATAGTTACTAAGTTTGCATA
TAATGTCCAGAGAAGGATGCTACACGGTACACAAGTACATTTGCGGAGCATTGCAAGTTGGTTGGTCTGTTTACACAAGTACATTTGGTGTACCTCGTGTGCAACTTATT
ATATTTCTACTAATATATATGTTTATTTATTATACTTGAACGAAATATATATTTCATTTGGTTTGCCTTGTCAAATGTCTTGGTAAAGTTGAAATGTGATTGTCTCCTAA
TCAAGATCTGCATTTTACCGGGTAGAATATAGTTAGTATACGTATTCATTGGCCCAATACTGGTTTGGGAACTCCAAGCAATTCCTATACCCTTCAAAGTGCATAACACG
TTACTCTTACAGGTTAACTACATTAATGCACATGCAACATCCACCCTTGTCGGTGACATAGCTGAGATCAATGCCATCAAGAAGGTGTTTAAGAATATATCAGGGATCAA
AATCAATGCAACTAAGTCTATGATAGGGGCACTGCCTTGGTGCTGCTGGAGGTTTGGAGGCCATTGCCACTTTGAAAGCAATCGAAACAGGATGGTTGCATCCCACCATA
AATCAATTTAACCCTGAGCCTTCAGTCGACTTTGACACGGTCGCGAATGTAAAGCTGCATCACGAAGTGAATGTTGGTAAGCTCTTATGATTTATTTTCCAATTGCTTTA
AATCACAATTCTACAATTCTCTGTATTCAGCTATCTTTAATTCGTTCGGCATTGGTGGACACAACTCAGTCGTGGCATTTTCAGCATTCAAACCTTAATGAGTACAGTAA
TAATAATAATAATACTTTGAGTCCGTGGGGTGGTGAAATGGTTGAAGATTTGGGTTTTGAGCGTATGCTTCCCTCAAAGTCCCGAATTTGAATCTTTTCTGTGACAGTAC
TGTTCAATATTACTTGGACAAAATAACTTCCATAGTTGGAAGTAAAGTTTAGGGGATTTGCAACTTTTTATCGAAAATTGTCAATTATTATTGGGTTAAATCTACCTTAG
CGAAAAGGTTGCAGATTTCACCTGTAGTATAAACTAAAAAGTTCAACATTCTCTAGGACTCAGCAAAACCCTAAAAACAAACACTCCACTTGCTTCAGGCTTTTTTCTCC
ATTTACTTTATGAAGATTATCGATGAACGAAGAAGTGGGTTCGAAGAAAAGGAAGAG
Protein sequenceShow/hide protein sequence
MYFPNFFRRLSMDEEQGSKKSKSHGNRWAIFKRSLRRESRKMKLLGSAFNWKRLTHLQISFRDNLLFKIVSMFEAVVLVLRLCFFLLCFGCHF