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Sed0015746 (gene) of Chayote v1 genome

Gene IDSed0015746
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:7089610..7090048
RNA-Seq ExpressionSed0015746
SyntenySed0015746
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577703.1 hypothetical protein SDJN03_25277, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2056.64Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWN----SPERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR
        MTLNCLSCQ LQR+DS+RD   PD    ++++       RSWSGNLSFRPP   K   LRA+ ED+A     RR+HS+G +  G   KEP+L+RSSGMRR
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWN----SPERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR

Query:  DWSFEDLTIAIKE
        DWSFEDL  AI+E
Subjt:  DWSFEDLTIAIKE

XP_022952265.1 uncharacterized protein LOC111454968 [Cucurbita moschata]1.0e-2764.1Show/hide
Query:  MTLNCLSCQR-LQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAK--GGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWS
        M+LNCLSCQ  LQRSDSD+D        +D   SP+RSWSGNLSFRPP +    G R   E+K A  GHRR+HSTG V FGGPGKEPRLIRS+GMRRDWS
Subjt:  MTLNCLSCQR-LQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAK--GGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWS

Query:  FEDLTI--AIKESSPIS
        FEDL      KESSP S
Subjt:  FEDLTI--AIKESSPIS

XP_023007608.1 uncharacterized protein LOC111500186 [Cucurbita maxima]7.1e-2156.64Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNS----PERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR
        MTLNCLSCQ LQR+DS+RD   PD  + ++++       RSWSGNLSFRPP   K   LRA+ ED+A     RR+HS+G +  G   KEP+L+RSSGMRR
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNS----PERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR

Query:  DWSFEDLTIAIKE
        DWSFEDL  AI+E
Subjt:  DWSFEDLTIAIKE

XP_023539506.1 uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]7.8e-2864.1Show/hide
Query:  MTLNCLSCQR-LQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAK--GGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWS
        M+LNCLSCQ  LQRSDSD+D        +D   SP+RSWSGNLSFRPP +    G R   E+K A  GHRR+HSTG V FGGPGKEPRLIRS+GMRRDWS
Subjt:  MTLNCLSCQR-LQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAK--GGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWS

Query:  FEDLTI--AIKESSPIS
        FEDL      KESSP S
Subjt:  FEDLTI--AIKESSPIS

XP_023553065.1 uncharacterized protein LOC111810575 [Cucurbita pepo subsp. pepo]1.6e-2056.64Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWN----SPERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR
        MTLNCLSCQ LQR+DS+RD   PD  + ++++       RSWSGNLSFRPP   K   LRA+ ED+A     RR+HS+G +  G   KEP+L+RSSGMRR
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWN----SPERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR

Query:  DWSFEDLTIAIKE
        DWSFEDL  AI+E
Subjt:  DWSFEDLTIAIKE

TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein2.2e-2055.37Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLI-----SDFWNSPERSWSGNLSFRPPAKGG------GLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRS
        M+LNCLSCQ LQR+DS+R   H D  +     SD +NS ERSWSGNL  RP   GG      G R +A++K A  GHRR      V FG  GKEPRLIRS
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLI-----SDFWNSPERSWSGNLSFRPPAKGG------GLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRS

Query:  SGMRRDWSFEDLTIAIKESSP
        SGMRRDWSFEDL    +E  P
Subjt:  SGMRRDWSFEDLTIAIKESSP

A0A1S3BJN6 uncharacterized protein LOC1034907833.5e-1853.91Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNSPE-----RSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRD
        M+LNCLSCQ LQR+DS+R   H D  I  ++ S E     RSWSGNLS R   +GG  R +A++K A   HRR      V FG  GKEPRL+RSSGMRRD
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNSPE-----RSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRD

Query:  WSFEDLTIAIKESSP
        WSFEDL    +E  P
Subjt:  WSFEDLTIAIKESSP

A0A5A7UAS3 Uncharacterized protein3.5e-1853.91Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNSPE-----RSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRD
        M+LNCLSCQ LQR+DS+R   H D  I  ++ S E     RSWSGNLS R   +GG  R +A++K A   HRR      V FG  GKEPRL+RSSGMRRD
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNSPE-----RSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRD

Query:  WSFEDLTIAIKESSP
        WSFEDL    +E  P
Subjt:  WSFEDLTIAIKESSP

A0A6J1GL99 uncharacterized protein LOC1114549684.9e-2864.1Show/hide
Query:  MTLNCLSCQR-LQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAK--GGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWS
        M+LNCLSCQ  LQRSDSD+D        +D   SP+RSWSGNLSFRPP +    G R   E+K A  GHRR+HSTG V FGGPGKEPRLIRS+GMRRDWS
Subjt:  MTLNCLSCQR-LQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAK--GGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWS

Query:  FEDLTI--AIKESSPIS
        FEDL      KESSP S
Subjt:  FEDLTI--AIKESSPIS

A0A6J1L834 uncharacterized protein LOC1115001863.4e-2156.64Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNS----PERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR
        MTLNCLSCQ LQR+DS+RD   PD  + ++++       RSWSGNLSFRPP   K   LRA+ ED+A     RR+HS+G +  G   KEP+L+RSSGMRR
Subjt:  MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNS----PERSWSGNLSFRPP--AKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRR

Query:  DWSFEDLTIAIKE
        DWSFEDL  AI+E
Subjt:  DWSFEDLTIAIKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein1.9e-1141.75Show/hide
Query:  MTLNCLSCQRLQRSDSDRDTG--HPDSLISDFWNSPERSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWSF
        M+LNCL+C  LQR+DSDRD G     S   +F  S       N S  P             +    GHRR++S   + + G   EP+L+RSSG+RRDWSF
Subjt:  MTLNCLSCQRLQRSDSDRDTG--HPDSLISDFWNSPERSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWSF

Query:  EDL
        EDL
Subjt:  EDL

AT5G46770.1 unknown protein3.3e-0835.29Show/hide
Query:  MTLNCLSCQRLQRSDSDRDT-----GHPDSLISDFWNSP-------ERSWSGNLS---FRPPAKGGGLRAVAEDKAARGGHRRIHS-TGGVDFGGPGK--
        M+LNCLSCQ L R+DS++D      G P   I++             R+WSGNLS   +    + G   A    K  +  H R+    G      P +  
Subjt:  MTLNCLSCQRLQRSDSDRDT-----GHPDSLISDFWNSP-------ERSWSGNLS---FRPPAKGGGLRAVAEDKAARGGHRRIHS-TGGVDFGGPGK--

Query:  EPRLIRSSGMRRDWSFEDL
        +P+L+RS+G+RR+WSFE+L
Subjt:  EPRLIRSSGMRRDWSFEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCAATTGTCTGTCCTGTCAGCGATTGCAGAGATCCGACTCCGACAGAGACACCGGCCACCCGGATTCCCTGATCTCCGACTTCTGGAACTCGCCGGAGAGAAG
CTGGTCCGGCAACCTCTCATTCCGCCCGCCGGCAAAGGGAGGGGGGTTGCGGGCGGTGGCGGAGGACAAGGCGGCGCGTGGGGGTCACCGGCGGATTCACAGCACCGGCG
GCGTGGACTTCGGCGGGCCGGGGAAGGAGCCGCGGCTGATTCGAAGCTCCGGCATGAGGAGGGATTGGAGCTTTGAGGATCTCACCATCGCCATCAAGGAATCGTCTCCC
ATTTCCTAA
mRNA sequenceShow/hide mRNA sequence
CCCCATTGGTGTCTCTGTAATAACCTAAACCAATCATGACTCTCAATTGTCTGTCCTGTCAGCGATTGCAGAGATCCGACTCCGACAGAGACACCGGCCACCCGGATTCC
CTGATCTCCGACTTCTGGAACTCGCCGGAGAGAAGCTGGTCCGGCAACCTCTCATTCCGCCCGCCGGCAAAGGGAGGGGGGTTGCGGGCGGTGGCGGAGGACAAGGCGGC
GCGTGGGGGTCACCGGCGGATTCACAGCACCGGCGGCGTGGACTTCGGCGGGCCGGGGAAGGAGCCGCGGCTGATTCGAAGCTCCGGCATGAGGAGGGATTGGAGCTTTG
AGGATCTCACCATCGCCATCAAGGAATCGTCTCCCATTTCCTAACACCTTTTTTTTGAAAACTAACCAACCCCTTTTTTTTTCCTATTCACTATTCATTTTTATTTCCC
Protein sequenceShow/hide protein sequence
MTLNCLSCQRLQRSDSDRDTGHPDSLISDFWNSPERSWSGNLSFRPPAKGGGLRAVAEDKAARGGHRRIHSTGGVDFGGPGKEPRLIRSSGMRRDWSFEDLTIAIKESSP
IS