; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015769 (gene) of Chayote v1 genome

Gene IDSed0015769
OrganismSechium edule (Chayote v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationLG01:16367936..16370939
RNA-Seq ExpressionSed0015769
SyntenySed0015769
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012857002.1 PREDICTED: uncharacterized protein LOC105976270 [Erythranthe guttata]3.5e-4328.24Show/hide
Query:  MRKRIGNGQNSFVFKSPWIPRENTFRVISPH-CSSISGIHVCESITTNGD-WDQEL-SAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQW
        +R+RIGNG N+ ++  PW+     F++I+    SS     V + + ++ + W+ +L     W  DV+ I  + +   +  D W+WH+S  G+F+VRSA  
Subjt:  MRKRIGNGQNSFVFKSPWIPRENTFRVISPH-CSSISGIHVCESITTNGD-WDQEL-SAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQW

Query:  LFRHNFFEASRV----NG---GSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSF
        +  +N   +S +    NG   G++   WKC+W L +P K+++F+WR     LPTN  L +R++   P C  CG   ES  H+   C   N +W+      
Subjt:  LFRHNFFEASRV----NG---GSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSF

Query:  HPESLKLLDTQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLK
        +P +      Q  +      L ++   +A++  W  W  RN+   NE V   +    W   YL +F KSN +  +      S   + P  W  P  G LK
Subjt:  HPESLKLLDTQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLK

Query:  LNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDE
        +N D +     PKL    + R+H  +C     +      + +  EA+A L  + +A   G++ +I E DS  ++ A+      + P G I+DE
Subjt:  LNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.4e-4632.88Show/hide
Query:  MRKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWD-QELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF
        +R R+GNG     F  PW+PR  TF+ +  +  ++    V   IT +G+WD   +S     ED + I S+ I     +D W+WHY K G++SVRS   L+
Subjt:  MRKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWD-QELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF

Query:  RHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLD
         H    A+  +       W  +W L VP K+K+F+WR  HE +PT   L  R +   P C +CG+  ES  H FF C RA  +W+ L        L   D
Subjt:  RHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLD

Query:  TQSAIEFFGA---DLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDAS
          S +E + +    L   +L  A I  W IW DRN +   + V P+  + EW+  +L+    S    S+      S        W       LKLN DA+
Subjt:  TQSAIEFFGA---DLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDAS

Query:  CSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAI
        C        FG I RD       A+SI  P     L  E   +LEGLK A    F +L +ESDS   +  I
Subjt:  CSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAI

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]2.3e-4232.12Show/hide
Query:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQELSAFLWR-EDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR
        R RIGNGQN  V+ + WIPR  TF+ IS   S  +   V E I     W ++L    +R ED E I  I + K  +ED+ IWHY K G +SV+S   +  
Subjt:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQELSAFLWR-EDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR

Query:  HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDT
           F          +  W+ +W L +P K+K+F+WR  H+ LPT   L K+KV  +P C  C    E+  H   EC RA  +W+  +L+     +   D 
Subjt:  HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDT

Query:  QSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNF-NEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP
           ++F+    +K   A     LW+IW  RNK  F  +   P+ V +      +E F K    E          +A    +W  P  G+ K+NVDA+   
Subjt:  QSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNF-NEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP

Query:  LAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIR
             G G++ RD  G C+ A+     L   +   EA A+  GLKVA+       I ESDS  ++D I     SL+  G ++ +I+
Subjt:  LAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIR

XP_024190234.1 uncharacterized protein LOC112194221 [Rosa chinensis]1.8e-4732.5Show/hide
Query:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQELSAFLWR-EDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR
        R R+G G N  V+   W+P   TFR +SPH  +++ + V E +   G W++ L    +R  +V+ I SI I     +D  +WHY KDG ++V+S  WL  
Subjt:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQELSAFLWR-EDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR

Query:  HNFFEASRVNGGS----------SEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSF
            E  RV+ GS              W  LW L++ NK+KLF+WR    FLP    L +R V     C  CG   E+  H  + CP +  +WK    SF
Subjt:  HNFFEASRVNGGS----------SEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSF

Query:  HPESLKLLDTQSAIEFFG---ADLSKDNL-AYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWP
             K     S I+ F       SK+ +  ++VIC W +W  RN+     VV      +    ++L +F   +   S+++   D+      V+W  P  
Subjt:  HPESLKLLDTQSAIEFFG---ADLSKDNL-AYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWP

Query:  GFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRC
          LKLN DA+      K   G++ RD  G  K A     P    I+++EALA+  GL +    GF NL++ESDS  ++DA+    L LS  G +LD+I+C
Subjt:  GFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRC

XP_027118368.1 uncharacterized protein LOC113735569 [Coffea arabica]2.3e-4229.43Show/hide
Query:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHV-CESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF
        R R+GNG +  ++K  WIPR +TF++IS +   +    V C     +  W  E L    W +++E I  I +  S+  DK IWHYSK+G F+V+SA  L 
Subjt:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHV-CESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF

Query:  R---HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLK
        +     + + +  + GS +  W  LW L +PNK+K+F+WR+    LPT+  L  R V + P C++C    E   HLF  CP A   W    LSF    ++
Subjt:  R---HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLK

Query:  LLDTQSAIEFFGADLS---KDNLAYAVICLWSIWIDRNKV----NFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFL
        L   +    +    L+   K ++    I LW++W++RN      ++ + +  +++ I ++++Y          E++        +++AP+ W  P  GFL
Subjt:  LLDTQSAIEFFGADLS---KDNLAYAVICLWSIWIDRNKV----NFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFL

Query:  KLNVDASCSPLAPKLGFGLIFRDH-----MGLCKFASSIFKPLFCDILSVE-ALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDE
        K N D +        G G++ RD       G     S IF P   +  +   A++LL   KV       N+I+E DS  +V+ +       S +G++LD+
Subjt:  KLNVDASCSPLAPKLGFGLIFRDH-----MGLCKFASSIFKPLFCDILSVE-ALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDE

Query:  I
        I
Subjt:  I

TrEMBL top hitse value%identityAlignment
A0A5B7A5C8 Uncharacterized protein8.2e-4633.42Show/hide
Query:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNG-DWDQEL-SAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSA----
        R RIG G+   V+ S W+P  +TF+V+SP  +S+  + V + I ++G  W +EL S+ L   DV  IC I +      D  +WH+SK G FSVRSA    
Subjt:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNG-DWDQEL-SAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSA----

Query:  -QWLFRHNFFEASRV-NGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFH-P
           L + N FE S   N    +  WK LW+L +PNK+K+F+WR   + LPT   L +R +PV   C +CG+  E+  HLF +C     +W+  +  FH P
Subjt:  -QWLFRHNFFEASRV-NGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFH-P

Query:  ESLKLLDTQSAIEFFGADLSKDNLAYAVICLWSIWIDRNK-VNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKL
        +    LD     EF  + L    +    I LW +W  RN  V+      P+ V  + + QYL++F    D +            V    W+ P  G  KL
Subjt:  ESLKLLDTQSAIEFFGADLSKDNLAYAVICLWSIWIDRNK-VNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKL

Query:  NVDASCSPLAPKLGFGLIFRDHMG--LCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRCC
        N+D S  P     G G + RD  G  +  FA  + + +  D    +A+A+L G+  A ++G   L++E D   ++ AI      LS  G ILD+I+ C
Subjt:  NVDASCSPLAPKLGFGLIFRDHMG--LCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRCC

A0A6J1DX30 uncharacterized protein LOC1110248741.6e-4632.88Show/hide
Query:  MRKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWD-QELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF
        +R R+GNG     F  PW+PR  TF+ +  +  ++    V   IT +G+WD   +S     ED + I S+ I     +D W+WHY K G++SVRS   L+
Subjt:  MRKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWD-QELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF

Query:  RHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLD
         H    A+  +       W  +W L VP K+K+F+WR  HE +PT   L  R +   P C +CG+  ES  H FF C RA  +W+ L        L   D
Subjt:  RHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLD

Query:  TQSAIEFFGA---DLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDAS
          S +E + +    L   +L  A I  W IW DRN +   + V P+  + EW+  +L+    S    S+      S        W       LKLN DA+
Subjt:  TQSAIEFFGA---DLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDAS

Query:  CSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAI
        C        FG I RD       A+SI  P     L  E   +LEGLK A    F +L +ESDS   +  I
Subjt:  CSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAI

A0A803PM68 Uncharacterized protein1.8e-4530.93Show/hide
Query:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR
        R RIGNG +  V + PW+PR  TF+V     S   G++V + +  NG+WD+E + AF    D E I  +   +   EDK +WHYSK+G++SVRS   +  
Subjt:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR

Query:  HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGN-FYESFFHLFFECPRANALWKALDLSFHPESLKLLD
               + N  ++E WW+ LW LK+P K+K F+W++ H +LPTN  L  RKV V+P+C  C +  YE+ FH  + C     +WK        +     D
Subjt:  HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGN-FYESFFHLFFECPRANALWKALDLSFHPESLKLLD

Query:  TQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP
          + +       SKD+  + +I  W++W  RN VN     P     ++W  ++L +F      + H  A        A  RW  P     K+NVDA    
Subjt:  TQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP

Query:  LAPKLG------FGLIFRDHMG-LCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAI
           K+G      F  + RDH G +C   +++ + ++   L  E +A+  GL+   +    + I+E+D    V+ +
Subjt:  LAPKLG------FGLIFRDHMG-LCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAI

A0A803PV25 Uncharacterized protein1.5e-4730.36Show/hide
Query:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR
        R RIGNG +  V   PW+PR  TF++          +HV +    NG+WD+E + A     D E I  ++  +   EDK +WHYSKDG++SVRS   +  
Subjt:  RKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFR

Query:  HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGN-FYESFFHLFFECPRANALWKALDLSFHPESLKLLD
               + N  ++  WW+ LW LK+P K+K F+W++ H ++PTN  L  RKV ++P+C  C +  YE+ FH  + C     +WK    S   +     D
Subjt:  HNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGN-FYESFFHLFFECPRANALWKALDLSFHPESLKLLD

Query:  TQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP
          + +    + L+K++  Y ++  W++W  RN VN     P     +EW  ++L +F  SN           + +A A  RW+AP  G   +NVDA    
Subjt:  TQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP

Query:  LAPKLGFGL-----IFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRC
           K+G GL     + RDH G  K A+          L  E  A+ +G+K        +  +E+D    V+ +L +         ++ +IRC
Subjt:  LAPKLGFGL-----IFRDHMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRC

A0A803QI38 Uncharacterized protein3.4e-4431.88Show/hide
Query:  RIGNGQNSFVFKSPWIPRENTFRVIS---PHCSSISGIHVCESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF
        ++GNG +   F+ PWIP      + S   P    +S       I  +G WD+E L  +     V  I  I I    + D  IW     G FSV+SA  + 
Subjt:  RIGNGQNSFVFKSPWIPRENTFRVIS---PHCSSISGIHVCESITTNGDWDQE-LSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLF

Query:  RHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLD
         +     S  +   S+ WWK LWNL V  K+K F WR+YH  LP  L L  RK   QP C  C N  E+  H   +CPRA+ +WKA  L     S + +D
Subjt:  RHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLD

Query:  TQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP
         +  +      L KD L   V  LW+IW  RNK  F  +    N  I WI  Y+ D+  +  M+ ++++   +  A      + P   +L L  DA+ + 
Subjt:  TQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSP

Query:  LAPKLGFGLIFRDHMGLCKFASSIFKPLFCDI--LSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRC
           K+GFG +  D  G  K  + +  P+  ++  L  EAL+L   L+   N+     +IE+DSK LVD +L  +   S    ++++IRC
Subjt:  LAPKLGFGLIFRDHMGLCKFASSIFKPLFCDI--LSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRC

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.6e-1222.11Show/hide
Query:  DKWIWHYSKDGDFSVRSAQWLFRHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECP
        D+  W +S+DG FSVRSA     +       V   +  +++ CLW ++VP ++K F+W + ++ + T     +R +     C +C    ES  H+  +CP
Subjt:  DKWIWHYSKDGDFSVRSAQWLFRHNFFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECP

Query:  RANALW-----KALDLSFHPESLKLLDTQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDS
            +W     +     F  +SL      +  +  G +    +  +AVI  W  W  R    F E       R+++++++  +  +++    +       
Subjt:  RANALW-----KALDLSFHPESLKLLDTQSAIEFFGADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDS

Query:  CSAVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGL-C-KFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLV
              + W++P  G++K+N D +          G + RD  G  C  F+ +I +   C     E   +  GL  A       + +E DS+ +V
Subjt:  CSAVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGL-C-KFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLV

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.5e-0430.88Show/hide
Query:  WWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWK
        W+K +W      K     W +    L T   L+   + +   C++C +  ES  HLFFECP   A+W+
Subjt:  WWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWK

AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-2728.66Show/hide
Query:  DQELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFRHN---FFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLV
        D ++S F+ + D   I  I + KS + DK IW+Y+  G+++VRS  WL  H+      A     GS +   + +WNL +  KLK F+WR   + L T   
Subjt:  DQELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFRHN---FFEASRVNGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLV

Query:  LQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDTQSAIEFF-----GADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPI
        L  R + + P C  C    ES  H  F CP A   W+  D S     L   D +  I           +S  +    V  +W IW  RN V FN+     
Subjt:  LQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDTQSAIEFF-----GADLSKDNLAYAVICLWSIWIDRNKVNFNEVVPPI

Query:  NVRIEWIRQYLEDFLKSNDMESHKHAEYDSCS-AVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLE
        +  +   +    D+L  N  +SHK     +   A   + W  P   ++K N DA       +   G I R+H G      S+      + L  E  ALL 
Subjt:  NVRIEWIRQYLEDFLKSNDMESHKHAEYDSCS-AVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFCDILSVEALALLE

Query:  GLKVADNLGFHNLIIESDSKTLVDAILG
         L+     G+  + +E D +TL++ I G
Subjt:  GLKVADNLGFHNLIIESDSKTLVDAILG

AT3G25270.1 Ribonuclease H-like superfamily protein7.9e-1722.61Show/hide
Query:  LWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDTQSAIEFF----GADLSKDNL
        +W LK   K+K F+W+L    L T   L++R +   P C  C    E+  HLFF+C  A  +W+A  +         +  ++ +E       A+      
Subjt:  LWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDTQSAIEFF----GADLSKDNL

Query:  AYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSN----DMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRD
          A+  LW +W  RN++ F +        ++  R  ++++  +N     +    H+       +A  +W  P   ++K N D + +        G + RD
Subjt:  AYAVICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSN----DMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRD

Query:  HMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLS
          G+   +         D L  E  AL+  ++ A + G+  +I E DSK + + +   +L+
Subjt:  HMGLCKFASSIFKPLFCDILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLS

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-0734.92Show/hide
Query:  WWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRA
        W   +W+LK+  K+KL +W+  +  LP    L  R + ++P+C  C +F E+  H+ F CP A
Subjt:  WWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRA

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.0e-0531.58Show/hide
Query:  WWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHP
        W K +W  +   +  L  W  + E LPT   L+   + +    V+C N  E+  HLFFEC  + A+W+     F P
Subjt:  WWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGGAAGCGCATCGGTAATGGCCAGAACTCATTTGTGTTTAAATCTCCTTGGATTCCAAGAGAGAACACTTTTCGGGTGATTTCACCTCATTGCTCAAGCATTAG
TGGCATTCATGTTTGTGAATCCATTACTACAAATGGAGATTGGGATCAGGAGCTTTCTGCTTTCCTTTGGAGGGAAGATGTAGAGTGCATTTGTTCAATTTCTATTTGCA
AATCCTATGAAGAGGATAAATGGATTTGGCACTACTCAAAGGATGGAGATTTCTCGGTTAGAAGTGCTCAGTGGCTGTTTAGACATAATTTTTTTGAAGCCTCTAGGGTA
AATGGTGGGTCAAGTGAAGCTTGGTGGAAGTGTCTTTGGAACCTTAAAGTTCCAAATAAGTTGAAGCTTTTCATGTGGAGACTCTATCATGAATTTCTACCAACCAACCT
TGTGTTACAAAAAAGAAAGGTTCCTGTTCAGCCTTGGTGTGTGATGTGTGGAAATTTTTATGAATCATTTTTCCATTTATTTTTTGAATGCCCCCGTGCCAATGCTTTGT
GGAAAGCTTTGGATCTTAGTTTTCATCCAGAATCTCTAAAGTTGTTGGATACTCAAAGTGCCATTGAATTTTTTGGAGCCGATCTTTCGAAAGACAATCTGGCTTATGCA
GTTATTTGCCTCTGGTCAATTTGGATCGATCGAAATAAAGTAAATTTTAATGAGGTTGTCCCCCCAATTAATGTTCGAATTGAATGGATTCGTCAGTATTTGGAGGATTT
TTTGAAGTCTAATGATATGGAATCCCATAAGCATGCTGAGTATGATTCTTGCTCTGCTGTTGCTCCTGTTCGTTGGATTGCGCCATGGCCGGGATTTCTCAAGCTTAATG
TCGATGCTTCATGTTCCCCTTTAGCGCCGAAATTGGGGTTTGGATTAATTTTCAGAGATCACATGGGATTATGCAAATTTGCTTCTTCCATTTTCAAACCTCTGTTTTGT
GATATCCTCTCTGTGGAAGCTTTGGCTTTGTTGGAGGGATTGAAGGTGGCTGATAATCTTGGATTCCATAATTTGATTATTGAATCTGATTCAAAGACACTTGTCGATGC
TATTCTAGGGAATCGTTTATCTCTTTCTCCTCACGGTATTATCCTTGATGAAATTCGTTGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGGAAGCGCATCGGTAATGGCCAGAACTCATTTGTGTTTAAATCTCCTTGGATTCCAAGAGAGAACACTTTTCGGGTGATTTCACCTCATTGCTCAAGCATTAG
TGGCATTCATGTTTGTGAATCCATTACTACAAATGGAGATTGGGATCAGGAGCTTTCTGCTTTCCTTTGGAGGGAAGATGTAGAGTGCATTTGTTCAATTTCTATTTGCA
AATCCTATGAAGAGGATAAATGGATTTGGCACTACTCAAAGGATGGAGATTTCTCGGTTAGAAGTGCTCAGTGGCTGTTTAGACATAATTTTTTTGAAGCCTCTAGGGTA
AATGGTGGGTCAAGTGAAGCTTGGTGGAAGTGTCTTTGGAACCTTAAAGTTCCAAATAAGTTGAAGCTTTTCATGTGGAGACTCTATCATGAATTTCTACCAACCAACCT
TGTGTTACAAAAAAGAAAGGTTCCTGTTCAGCCTTGGTGTGTGATGTGTGGAAATTTTTATGAATCATTTTTCCATTTATTTTTTGAATGCCCCCGTGCCAATGCTTTGT
GGAAAGCTTTGGATCTTAGTTTTCATCCAGAATCTCTAAAGTTGTTGGATACTCAAAGTGCCATTGAATTTTTTGGAGCCGATCTTTCGAAAGACAATCTGGCTTATGCA
GTTATTTGCCTCTGGTCAATTTGGATCGATCGAAATAAAGTAAATTTTAATGAGGTTGTCCCCCCAATTAATGTTCGAATTGAATGGATTCGTCAGTATTTGGAGGATTT
TTTGAAGTCTAATGATATGGAATCCCATAAGCATGCTGAGTATGATTCTTGCTCTGCTGTTGCTCCTGTTCGTTGGATTGCGCCATGGCCGGGATTTCTCAAGCTTAATG
TCGATGCTTCATGTTCCCCTTTAGCGCCGAAATTGGGGTTTGGATTAATTTTCAGAGATCACATGGGATTATGCAAATTTGCTTCTTCCATTTTCAAACCTCTGTTTTGT
GATATCCTCTCTGTGGAAGCTTTGGCTTTGTTGGAGGGATTGAAGGTGGCTGATAATCTTGGATTCCATAATTTGATTATTGAATCTGATTCAAAGACACTTGTCGATGC
TATTCTAGGGAATCGTTTATCTCTTTCTCCTCACGGTATTATCCTTGATGAAATTCGTTGCTGCTAA
Protein sequenceShow/hide protein sequence
MMRKRIGNGQNSFVFKSPWIPRENTFRVISPHCSSISGIHVCESITTNGDWDQELSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAQWLFRHNFFEASRV
NGGSSEAWWKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHLFFECPRANALWKALDLSFHPESLKLLDTQSAIEFFGADLSKDNLAYA
VICLWSIWIDRNKVNFNEVVPPINVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSAVAPVRWIAPWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPLFC
DILSVEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPHGIILDEIRCC