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Sed0015783 (gene) of Chayote v1 genome

Gene IDSed0015783
OrganismSechium edule (Chayote v1)
DescriptionSquamosa-promoter binding-like protein
Genome locationLG04:43740166..43741455
RNA-Seq ExpressionSed0015783
SyntenySed0015783
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022956.1 Squamosa promoter-binding-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma]7.9e-6192.97Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKD-
        MRCCQAEKC ADLSEAKPYHRRHKVCE+HAKSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGTGG QMKD 
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKD-

Query:  SVCGQVDDKGRIQMTIQENTAYEHFQIR
        SVCGQ DD+GRIQMTIQEN AY+HFQIR
Subjt:  SVCGQVDDKGRIQMTIQENTAYEHFQIR

XP_022930778.1 squamosa promoter-binding protein 1-like [Cucurbita moschata]7.9e-6192.97Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKD-
        MRCCQAEKC ADLSEAKPYHRRHKVCE+HAKSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGTGG QMKD 
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKD-

Query:  SVCGQVDDKGRIQMTIQENTAYEHFQIR
        SVCGQ DD+GRIQMTIQEN AY+HFQIR
Subjt:  SVCGQVDDKGRIQMTIQENTAYEHFQIR

XP_022989218.1 squamosa promoter-binding protein 1-like [Cucurbita maxima]3.9e-6092.91Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        MRCCQAEKC ADLSEAKPYHRRHKVCE+HAKSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGT G QMKDS
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTIQENTAYEHFQIR
        VCGQ DD+GRIQMTIQEN AY+HFQIR
Subjt:  VCGQVDDKGRIQMTIQENTAYEHFQIR

XP_023531078.1 squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo]3.2e-6293.7Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        MRCCQAEKC ADLSEAKPYHRRHKVCE+HAKSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGTGG QMKDS
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTIQENTAYEHFQIR
        VCGQ DD+GRIQMTIQEN AY+HFQIR
Subjt:  VCGQVDDKGRIQMTIQENTAYEHFQIR

XP_038888920.1 squamosa promoter-binding protein 1-like [Benincasa hispida]2.1e-6193.7Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        MRCCQAEKC+ADL+EAKPYHRRHKVCE+HAKSQVVLVGGF+QRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGT GTQMKDS
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTIQENTAYEHFQIR
        VCGQVDDKGRIQMTIQEN +Y+HFQIR
Subjt:  VCGQVDDKGRIQMTIQENTAYEHFQIR

TrEMBL top hitse value%identityAlignment
A0A2I4E643 squamosa promoter-binding protein 1-like2.5e-5282.68Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        +RCCQAEKC ADLS+AK YHRRHKVCE HAK+QVVLVGG RQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRK SAES+AE S RKGT GTQ+KD 
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTIQENTAYEHFQIR
        VCGQVDD+GRIQ++I EN+ Y+HFQIR
Subjt:  VCGQVDDKGRIQMTIQENTAYEHFQIR

A0A5N6RBD2 SBP-type domain-containing protein4.3e-5282.03Show/hide
Query:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGT--QMKD
        RCCQAEKC ADL+EAKPYHRRHKVCE HAK QVVLVGG RQRFCQQCSRFHE+SEFDE KRSCRRRLAGHNERRRK SAES+AE S RKGT G+  Q+KD
Subjt:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGT--QMKD

Query:  SVCGQVDDKGRIQMTIQENTAYEHFQIR
         VCGQVDD+GRIQ+TI EN+ Y+HFQIR
Subjt:  SVCGQVDDKGRIQMTIQENTAYEHFQIR

A0A6J1EWC3 squamosa promoter-binding protein 1-like3.8e-6192.97Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKD-
        MRCCQAEKC ADLSEAKPYHRRHKVCE+HAKSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGTGG QMKD 
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKD-

Query:  SVCGQVDDKGRIQMTIQENTAYEHFQIR
        SVCGQ DD+GRIQMTIQEN AY+HFQIR
Subjt:  SVCGQVDDKGRIQMTIQENTAYEHFQIR

A0A6J1JPM8 squamosa promoter-binding protein 1-like1.9e-6092.91Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        MRCCQAEKC ADLSEAKPYHRRHKVCE+HAKSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGT G QMKDS
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTIQENTAYEHFQIR
        VCGQ DD+GRIQMTIQEN AY+HFQIR
Subjt:  VCGQVDDKGRIQMTIQENTAYEHFQIR

A0A7N2MC61 SBP-type domain-containing protein1.1e-5282.81Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGT-QMKD
        MRCCQAEKC ADLS+AKPYHRRHKVCE HAK+QVVLVGG RQRFCQQCSRFHELSEFDE KRSCRRRLAGHNERRRK SAES+AE S RKG GG  Q+KD
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGT-QMKD

Query:  SVCGQVDDKGRIQMTIQENTAYEHFQIR
         VCGQVDD+GRI++TI EN+ Y+HFQIR
Subjt:  SVCGQVDDKGRIQMTIQENTAYEHFQIR

SwissProt top hitse value%identityAlignment
Q38741 Squamosa promoter-binding protein 12.0e-3075.61Show/hide
Query:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESN
        R CQ E C A+++ AKPYHRRHKVCE HAK+ VVL  G +QRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRK S +++
Subjt:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESN

Q6Z461 Squamosa promoter-binding-like protein 131.9e-2874.68Show/hide
Query:  CQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES
        CQ E+C  DLSEA  Y+RRHKVC+ H+K  VVLV G RQRFCQQCSRFHEL+EFD+AKRSCRRRLAGHNERRRK +A++
Subjt:  CQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES

Q9S758 Squamosa promoter-binding-like protein 52.8e-3257.94Show/hide
Query:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDSV
        R CQ ++C  +L+EAK Y+RRH+VCE+HAK+    V G RQRFCQQCSRFHEL EFDEAKRSCRRRLAGHNERRRKIS +S  E S R+G  G  ++   
Subjt:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDSV

Query:  CGQVDDKGRIQMTIQENTAYEHFQIR
          +VD K  + MT   N++++  QIR
Subjt:  CGQVDDKGRIQMTIQENTAYEHFQIR

Q9S7A9 Squamosa promoter-binding-like protein 45.6e-3355.47Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        +R CQ ++C AD+ EAK YHRRHKVCE+HAK+  V + G  QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNERRRK S ES    +  +G+G   +   
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTI-QENTAYEHFQIR
        V  Q  ++ R++MT+   N++++  QIR
Subjt:  VCGQVDDKGRIQMTI-QENTAYEHFQIR

Q9S7P5 Squamosa promoter-binding-like protein 122.4e-2871.25Show/hide
Query:  CCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES
        CCQ + C ADLS+ K YHRRHKVCEIH+K+   LVGG  QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK + ++
Subjt:  CCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES

Arabidopsis top hitse value%identityAlignment
AT1G53160.1 squamosa promoter binding protein-like 44.0e-3455.47Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        +R CQ ++C AD+ EAK YHRRHKVCE+HAK+  V + G  QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNERRRK S ES    +  +G+G   +   
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTI-QENTAYEHFQIR
        V  Q  ++ R++MT+   N++++  QIR
Subjt:  VCGQVDDKGRIQMTI-QENTAYEHFQIR

AT1G53160.2 squamosa promoter binding protein-like 44.0e-3455.47Show/hide
Query:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS
        +R CQ ++C AD+ EAK YHRRHKVCE+HAK+  V + G  QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNERRRK S ES    +  +G+G   +   
Subjt:  MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDS

Query:  VCGQVDDKGRIQMTI-QENTAYEHFQIR
        V  Q  ++ R++MT+   N++++  QIR
Subjt:  VCGQVDDKGRIQMTI-QENTAYEHFQIR

AT2G33810.1 squamosa promoter binding protein-like 31.5e-2871.79Show/hide
Query:  CQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAE
        CQ E C AD+S+AK YH+RHKVC+ HAK+  V + G  QRFCQQCSRFH LSEFDEAKRSCRRRLAGHNERRRK + +
Subjt:  CQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAE

AT3G15270.1 squamosa promoter binding protein-like 52.0e-3357.94Show/hide
Query:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDSV
        R CQ ++C  +L+EAK Y+RRH+VCE+HAK+    V G RQRFCQQCSRFHEL EFDEAKRSCRRRLAGHNERRRKIS +S  E S R+G  G  ++   
Subjt:  RCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDSV

Query:  CGQVDDKGRIQMTIQENTAYEHFQIR
          +VD K  + MT   N++++  QIR
Subjt:  CGQVDDKGRIQMTIQENTAYEHFQIR

AT3G60030.1 squamosa promoter-binding protein-like 121.7e-2971.25Show/hide
Query:  CCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES
        CCQ + C ADLS+ K YHRRHKVCEIH+K+   LVGG  QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK + ++
Subjt:  CCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTGTTGTCAAGCTGAGAAGTGTATGGCTGATCTGAGTGAAGCTAAACCGTATCACAGGAGGCATAAGGTGTGTGAAATTCATGCCAAATCTCAGGTTGTGCTTGT
GGGTGGGTTTAGGCAGAGATTTTGTCAGCAATGTAGCAGGTTCCACGAGCTATCGGAGTTCGACGAAGCAAAAAGGAGTTGCCGGAGGCGACTAGCGGGCCACAACGAGC
GTCGAAGGAAGATCTCAGCTGAGTCTAATGCTGAATGCTCCATCCGCAAAGGGACTGGAGGAACACAGATGAAGGATAGTGTGTGTGGGCAGGTTGATGATAAGGGGAGA
ATTCAAATGACCATTCAAGAAAATACTGCCTATGAACACTTTCAGATCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTGTTGTCAAGCTGAGAAGTGTATGGCTGATCTGAGTGAAGCTAAACCGTATCACAGGAGGCATAAGGTGTGTGAAATTCATGCCAAATCTCAGGTTGTGCTTGT
GGGTGGGTTTAGGCAGAGATTTTGTCAGCAATGTAGCAGGTTCCACGAGCTATCGGAGTTCGACGAAGCAAAAAGGAGTTGCCGGAGGCGACTAGCGGGCCACAACGAGC
GTCGAAGGAAGATCTCAGCTGAGTCTAATGCTGAATGCTCCATCCGCAAAGGGACTGGAGGAACACAGATGAAGGATAGTGTGTGTGGGCAGGTTGATGATAAGGGGAGA
ATTCAAATGACCATTCAAGAAAATACTGCCTATGAACACTTTCAGATCAGATAA
Protein sequenceShow/hide protein sequence
MRCCQAEKCMADLSEAKPYHRRHKVCEIHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGTQMKDSVCGQVDDKGR
IQMTIQENTAYEHFQIR