; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015811 (gene) of Chayote v1 genome

Gene IDSed0015811
OrganismSechium edule (Chayote v1)
DescriptionNuclear transcription factor Y subunit
Genome locationLG12:25803734..25808637
RNA-Seq ExpressionSed0015811
SyntenySed0015811
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]4.8e-11887.6Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   D NGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D Q
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECLAQ++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETN
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EA+GKE HSDKVNE++
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETN

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]4.8e-11887.55Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECL Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE HSDKV+E+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]4.8e-11887.55Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECL Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE HSDKV+E+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]1.8e-12088.76Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ  SDPNGAPSTS+Y+EPWWRGIGYNPIPLP VG N S STSLE PNGGSESNDGQSVSNND+NDEEDDV KEVQATGSPHSAGSYRLDAQ
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGEC  Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +KLIKARKPYLHESRHQHA+RR R +GGRFAKK+EA+  EMHSDK NE+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]4.5e-11687.55Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECL Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKKNE DGK    DKVNE+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit2.3e-11887.6Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   D NGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D Q
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECLAQ++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETN
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EA+GKE HSDKVNE++
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETN

A0A1S3BP85 Nuclear transcription factor Y subunit2.3e-11887.55Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECL Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE HSDKV+E+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

A0A1S3BPV3 Nuclear transcription factor Y subunit2.3e-11887.55Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECL Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE HSDKV+E+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

A0A5D3D5Q2 Nuclear transcription factor Y subunit2.3e-11887.55Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSESNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGECL Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE HSDKV+E+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

A0A6J1DK42 Nuclear transcription factor Y subunit8.6e-12188.76Show/hide
Query:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        MQSKSETNNQ  SDPNGAPSTS+Y+EPWWRGIGYNPIPLP VG N S STSLE PNGGSESNDGQSVSNND+NDEEDDV KEVQATGSPHSAGSYRLDAQ
Subjt:  MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQH SSTLPAMHGEC  Q++QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLP EIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET
        +KLIKARKPYLHESRHQHA+RR R +GGRFAKK+EA+  EMHSDK NE+
Subjt:  RKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNET

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.5e-2140.12Show/hide
Query:  GSYRLDAQKMQHGSSTLP-AMHGECLAQASQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHARMPLPFEIAQDPVFVNAKQYQGI
        GS+    Q+  H    +P A + E +  +      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRLDAQKMQHGSSTLP-AMHGECLAQASQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHARMPLPFEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETNRTSG
        LRRRQ+RA+ E++ K+IK+RKPYLHESRH HA+RR R  GGRF    + D     S    ++N ++G
Subjt:  LRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETNRTSG

Q8VY64 Nuclear transcription factor Y subunit A-42.3e-2244.67Show/hide
Query:  AQKMQHGSSTLPAM-HGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQ
        A+K +  S T P +  G          +    +A    PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ
Subjt:  AQKMQHGSSTLPAM-HGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQ

Query:  ARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRF--AKKNEADGKE
        +RAK EA  + IKA+KPY+HESRH HA+RR R  GGRF  AKK   D KE
Subjt:  ARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRF--AKKNEADGKE

Q93ZH2 Nuclear transcription factor Y subunit A-31.2e-2151.22Show/hide
Query:  YQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPFEIAQ-DPVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRF--
        Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ KLI+ARKPYLHESRH HAL+R R +GGRF  
Subjt:  YQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPFEIAQ-DPVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRF--

Query:  -----AKKNEADGKEMHSDKVNE
              +  +A  +E   DK+ +
Subjt:  -----AKKNEADGKEMHSDKVNE

Q945M9 Nuclear transcription factor Y subunit A-91.9e-4850.4Show/hide
Query:  MQSKSET-NNQHGSDPNGAPSTSV-YFEPWWR-GIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRL
        M SKS++  N+  S+ +G  S+S+    PW R     N       G  +S+S +L L     ESN  +S SN D     + V KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQHGSDPNGAPSTSV-YFEPWWR-GIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRL

Query:  DAQKMQHGSSTLPAMHGECLAQASQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHGSSTLPAMHGECLAQASQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDK
        KAE E+KLIK+RKPYLHESRHQHA+RR R TGGRFAKK   +  +  +++
Subjt:  KAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDK

Q9LXV5 Nuclear transcription factor Y subunit A-13.1e-5148.55Show/hide
Query:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSESND  S S +  +N E D  +K+ QA  S  S  ++ ++  
Subjt:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEA
             + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+VNAKQY+GILRRR+ARAKAE 
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEA

Query:  ERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE
        ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  E
Subjt:  ERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.3e-4950.4Show/hide
Query:  MQSKSET-NNQHGSDPNGAPSTSV-YFEPWWR-GIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRL
        M SKS++  N+  S+ +G  S+S+    PW R     N       G  +S+S +L L     ESN  +S SN D     + V KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQHGSDPNGAPSTSV-YFEPWWR-GIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRL

Query:  DAQKMQHGSSTLPAMHGECLAQASQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHGSSTLPAMHGECLAQASQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDK
        KAE E+KLIK+RKPYLHESRHQHA+RR R TGGRFAKK   +  +  +++
Subjt:  KAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDK

AT5G12840.1 nuclear factor Y, subunit A12.2e-5248.55Show/hide
Query:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSESND  S S +  +N E D  +K+ QA  S  S  ++ ++  
Subjt:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEA
             + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+VNAKQY+GILRRR+ARAKAE 
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEA

Query:  ERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE
        ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  E
Subjt:  ERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE

AT5G12840.2 nuclear factor Y, subunit A16.4e-5249.79Show/hide
Query:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSESND  S S +  +N E D  +K+ QA      A S R D  
Subjt:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPA--MHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKA
         M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  KMQHGSSTLPA--MHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE
        E ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  E
Subjt:  EAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE

AT5G12840.3 nuclear factor Y, subunit A12.2e-5248.55Show/hide
Query:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSESND  S S +  +N E D  +K+ QA  S  S  ++ ++  
Subjt:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEA
             + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+VNAKQY+GILRRR+ARAKAE 
Subjt:  KMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEA

Query:  ERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE
        ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  E
Subjt:  ERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE

AT5G12840.4 nuclear factor Y, subunit A16.4e-5249.79Show/hide
Query:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ
        +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSESND  S S +  +N E D  +K+ QA      A S R D  
Subjt:  QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQ

Query:  KMQHGSSTLPA--MHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKA
         M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  KMQHGSSTLPA--MHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE
        E ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  E
Subjt:  EAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCACGGATCTGATCCAAATGGTGCTCCATCCACAAGTGTCTATTTTGAACCCTGGTGGCGTGGTATTGGATACAATCCTAT
TCCGTTACCTGCGGTAGGTGCAAATGCTTCCAGATCAACATCTCTTGAATTACCTAATGGTGGTTCAGAGTCAAATGATGGTCAGTCTGTGTCTAATAATGATGTAAACG
ATGAAGAGGATGATGTTTACAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCTGGAAGTTACAGACTGGATGCTCAAAAGATGCAGCATGGGTCATCTACTTTGCCA
GCTATGCACGGTGAATGTCTGGCGCAGGCTTCACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCGTCAAATCCATACCAGGATCCATATTATGGAGGAATGATGGC
TTTCTATGGCCATCAGCCCTTGGGCTATCCTATGGTCGGAGCGCCACATGCTCGAATGCCATTGCCCTTCGAGATAGCACAAGACCCAGTTTTCGTGAATGCGAAGCAGT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAGGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCTTG
AGAAGGATGAGGAGTACCGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGACGAACAGGACCTCTGGGTAG
mRNA sequenceShow/hide mRNA sequence
CTCAAACTTCAAACAAAGTCTTCTCACTCTGAATTTTTTCTTTTGGAATTCACAGTTTTTTCAATCCTCCCTCAAATGGATTCAATTTCAATCTTTTGAAACAATTATCT
GTGATTTCTCTTCGCCCCCATCAGATTTCCCCCCTTTTTTTTCCATTGGAACGGTGCTCCAATTTCTTCCGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCACGGAT
CTGATCCAAATGGTGCTCCATCCACAAGTGTCTATTTTGAACCCTGGTGGCGTGGTATTGGATACAATCCTATTCCGTTACCTGCGGTAGGTGCAAATGCTTCCAGATCA
ACATCTCTTGAATTACCTAATGGTGGTTCAGAGTCAAATGATGGTCAGTCTGTGTCTAATAATGATGTAAACGATGAAGAGGATGATGTTTACAAAGAAGTGCAAGCTAC
TGGATCTCCACATTCTGCTGGAAGTTACAGACTGGATGCTCAAAAGATGCAGCATGGGTCATCTACTTTGCCAGCTATGCACGGTGAATGTCTGGCGCAGGCTTCACAAC
TCGAACTTGTTGGTCACTCTATTGCATGTGCGTCAAATCCATACCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGCCATCAGCCCTTGGGCTATCCTATGGTC
GGAGCGCCACATGCTCGAATGCCATTGCCCTTCGAGATAGCACAAGACCCAGTTTTCGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAA
AGCTGAGGCTGAGAGGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCTTGAGAAGGATGAGGAGTACCGGAGGGCGTTTCGCCAAGA
AAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGACGAACAGGACCTCTGGGTAGCGACCCGTACCAGGCAGTGGAGGGGAAGGCCAAGACGACGGC
CAAAGTGTTGGTATGGGGGATCGATCGCTTGGTTGTAGAAGTACGTACTGCATTCTTAGCAAGTGCTAGGCGGCAAATCATTCTTGGCTTGTTCTGTTGCTTTGAAAAAA
TAGAATGTGGAATGATATGTGACTTGCAGGATCTCATGGCTTCAAAGGATTTCTCTAAAGTCCGGATTTCTTCATTCCATTCTTTTTATTTTCTTTCATTTTTGTACAGA
GTTCATGGTAACTTAAGGGAGTGGAAAGTTTGTCATCTTGTATTATATGGCAGAGTGAAACTAAATGAATCGTAAGGCTAGACAGTGATTCATAAAGATCACCCTTTACA
GATTTTAGATTTTTATATCTAAGGTGGACAGATTATTGGTGCAAATTATAACAGGTGAACTAATGGGTGGGGTTTGTAAGTTTTCTTCTGTCAATTTAGAATTATTTTGG
TTGTGGAGTACAAGAATTATTAACAGTCCAAGTAAAGAAGAAAAATAGGTGTGTAGTGTTTGGAG
Protein sequenceShow/hide protein sequence
MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLP
AMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHAL
RRMRSTGGRFAKKNEADGKEMHSDKVNETNRTSG