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Sed0015843 (gene) of Chayote v1 genome

Gene IDSed0015843
OrganismSechium edule (Chayote v1)
DescriptionNon-specific lipid-transfer protein 2-like
Genome locationLG06:9419237..9419530
RNA-Seq ExpressionSed0015843
SyntenySed0015843
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064158.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]3.4e-2767.78Show/hide
Query:  GLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        GLCLLV  V+A  LTG RLGEA +CNP ELSPC+SAI S+ APTAACCQKL+QQ+PC CGY+KDPK+K Y  SPRV+ +AS C V +P+C
Subjt:  GLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

KAG6581741.1 hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3272.45Show/hide
Query:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVA-PTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        MKN HSSGLCLL   V+ A+LTG  +GEAV+CNP ELSPC+SAI SA A PT ACC+KLKQQQPC CGY+KDP+FKPYV SPR ++VAS+CH+AVPRC
Subjt:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVA-PTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

KGN53813.1 hypothetical protein Csa_015036 [Cucumis sativus]5.7e-2762.89Show/hide
Query:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        M     +GLCLLV  V+A  L+  RLGEAV+CNP ELSPC+SAI S+ APTAACCQKL+QQ+PC CGY+KDPK+K Y  SPRV+ +AS C V +P+C
Subjt:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

XP_022158506.1 non-specific lipid-transfer protein 2-like [Momordica charantia]5.9e-2462.24Show/hide
Query:  MKNSHSSGLCLLVAMV-MAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        MK      LCLLVA+V   A+L+G R  EA  CNPMELSPC+ AI S+  P+  CCQKLKQQQPC C Y KDP+ KPYV SPR K VAS+C +AVPRC
Subjt:  MKNSHSSGLCLLVAMV-MAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

XP_038904866.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]8.5e-2360.82Show/hide
Query:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        MKN   + L LLV + MAA+LTG RL EAVTC+ MELSPCI A  S   P+AACC KLK+QQPC CGY+K+PK   YV SPR K V S C V+ P+C
Subjt:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

TrEMBL top hitse value%identityAlignment
A0A0A0KW09 AAI domain-containing protein3.9e-2153Show/hide
Query:  KNSHSSGLCL---LVAMVM-AAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        K S S+ LCL   ++AMVM  A++TG  L +AV CNPME+ PC+ A+ S+V PTA CC+KLK+Q+PC C Y+K P FKPY+ SP  K +A+ C V +P C
Subjt:  KNSHSSGLCL---LVAMVM-AAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

A0A0A0KW80 AAI domain-containing protein2.8e-2762.89Show/hide
Query:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        M     +GLCLLV  V+A  L+  RLGEAV+CNP ELSPC+SAI S+ APTAACCQKL+QQ+PC CGY+KDPK+K Y  SPRV+ +AS C V +P+C
Subjt:  MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

A0A5D3BT00 Non-specific lipid-transfer protein 2-like1.6e-2767.78Show/hide
Query:  GLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        GLCLLV  V+A  LTG RLGEA +CNP ELSPC+SAI S+ APTAACCQKL+QQ+PC CGY+KDPK+K Y  SPRV+ +AS C V +P+C
Subjt:  GLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

A0A6J1D4R3 non-specific lipid-transfer protein 2-like1.0e-2155.1Show/hide
Query:  MKNSHSSGLCL-LVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        MK    +GL L L+ + +AA+L G R+ EAVTC+P ELSPC++AI+S + P++ACC KL++Q+PCLCGY+++P  KPYV SP  K VAS C VA P C
Subjt:  MKNSHSSGLCL-LVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

A0A6J1E135 non-specific lipid-transfer protein 2-like2.9e-2462.24Show/hide
Query:  MKNSHSSGLCLLVAMV-MAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        MK      LCLLVA+V   A+L+G R  EA  CNPMELSPC+ AI S+  P+  CCQKLKQQQPC C Y KDP+ KPYV SPR K VAS+C +AVPRC
Subjt:  MKNSHSSGLCLLVAMV-MAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 23.2e-1240.91Show/hide
Query:  LLVAMVMAAVLTGTRLGEA-VTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        L++A+ M A   G  +G A  +CN  +L+ C  AI     PTAACC  L+ QQ C C + KDP++  YV SP  +   S C +A+P C
Subjt:  LLVAMVMAAVLTGTRLGEA-VTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

P20145 Probable non-specific lipid-transfer protein4.9e-1340.91Show/hide
Query:  VAMVMAAVLT---GTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        VA++M  V+T   G   G    C P +L+ C SAI+    P+  CC  L+ QQ CLC YVKDP +  YV+SP  +   ++C + VP C
Subjt:  VAMVMAAVLT---GTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

P82353 Non-specific lipid-transfer protein 28.1e-1651.47Show/hide
Query:  VTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        VTC+P++LSPC+  I S       CCQKL++Q+PCLCGY+K+P  + YV SP  + +AS C V VP+C
Subjt:  VTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

P86809 Non-specific lipid-transfer protein 21.8e-1556.25Show/hide
Query:  TCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAV
        TC+ ++LSPC++AI     P+AACC KLK+Q+PCLCGY+KDP  K YV SP  +  AS C VA+
Subjt:  TCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAV

Q43681 Probable non-specific lipid-transfer protein AKCS99.5e-1747.25Show/hide
Query:  SGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        S +C +V + +  +  G  + EAVTCNP ELS C+ AI     P++ CC KLK Q+PCLC Y+K+P  K YV SP  K V S C V  P C
Subjt:  SGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.6e-1741.86Show/hide
Query:  LVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        ++A+  A +L    + E VTC+PM+L+ C +A+ S+  P+ ACC KL++QQPCLCGY+++P  + YV+SP  + V++ C +  P C
Subjt:  LVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.1e-1544.74Show/hide
Query:  TGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        TG      VTC+  +L PC++AI     P+ ACC KL +QQ CLCG+ K+P F  Y++SP  + V   C+VA P C
Subjt:  TGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.8e-1639.76Show/hide
Query:  MVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        +++  V    R+     CNP +LSPC+  IM    P+  CC K+K+QQ C+C Y+K+P FK ++ SP  K++A+ CH   P+C
Subjt:  MVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.3e-1844.19Show/hide
Query:  LVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        L A+    ++      EAVTC+PM+LSPC +AI S+  P+A CC KLK+Q+PCLCGY+++P  + +V++P  + V+  C + +PRC
Subjt:  LVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.7e-1445.83Show/hide
Query:  GEA-VTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC
        GEA VTC+ ++LS C + +++ V P+  CC KLK+QQPC C Y+KDP++  YV S   K   + C V  P C
Subjt:  GEA-VTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACTCTCATAGCTCAGGGCTTTGCCTTCTGGTGGCGATGGTGATGGCGGCAGTTCTCACTGGAACTCGTCTCGGGGAAGCGGTGACTTGCAACCCCATGGAGCT
AAGCCCATGTATCAGCGCAATCATGTCGGCGGTGGCACCAACAGCTGCTTGCTGCCAGAAGTTGAAGCAGCAGCAGCCATGCCTTTGCGGATACGTGAAAGATCCGAAGT
TCAAGCCGTATGTAACATCTCCGCGGGTCAAAGTGGTTGCTTCCATGTGCCATGTTGCGGTCCCTAGGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACTCTCATAGCTCAGGGCTTTGCCTTCTGGTGGCGATGGTGATGGCGGCAGTTCTCACTGGAACTCGTCTCGGGGAAGCGGTGACTTGCAACCCCATGGAGCT
AAGCCCATGTATCAGCGCAATCATGTCGGCGGTGGCACCAACAGCTGCTTGCTGCCAGAAGTTGAAGCAGCAGCAGCCATGCCTTTGCGGATACGTGAAAGATCCGAAGT
TCAAGCCGTATGTAACATCTCCGCGGGTCAAAGTGGTTGCTTCCATGTGCCATGTTGCGGTCCCTAGGTGCTAG
Protein sequenceShow/hide protein sequence
MKNSHSSGLCLLVAMVMAAVLTGTRLGEAVTCNPMELSPCISAIMSAVAPTAACCQKLKQQQPCLCGYVKDPKFKPYVTSPRVKVVASMCHVAVPRC