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Sed0015873 (gene) of Chayote v1 genome

Gene IDSed0015873
OrganismSechium edule (Chayote v1)
Descriptionsec-independent protein translocase protein TATA, chloroplastic
Genome locationLG06:6715313..6719541
RNA-Seq ExpressionSed0015873
SyntenySed0015873
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0043953 - protein transport by the Tat complex (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003369 - Sec-independent protein translocase protein TatA/B/E
IPR006312 - Sec-independent protein translocase protein TatA/E


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588320.1 Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-3461.78Show/hide
Query:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI
        M++SSATL FTSSIPR     PPFSSSKS+FF+NN T                        D+AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+
Subjt:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI

Query:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV
        G+SIGKTVKSFQQAAKEFESELKKE   +              E QDLKVSNQKESV
Subjt:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV

KAG7020882.1 Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-3461.78Show/hide
Query:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI
        M++SS TL FTSSIPR     PPFSSSKS+FFANN T                        D+AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+
Subjt:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI

Query:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV
        G+SIGKTVKSFQQAAKEFESELKKE   +              E QDLKVSNQKESV
Subjt:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV

XP_022158382.1 sec-independent protein translocase protein TATA, chloroplastic [Momordica charantia]1.5e-3466.43Show/hide
Query:  MMLSSATLPFTSSIPR----PPFSSSKSAFFANNG----------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQ
        M++SSATL FTSS+PR    PPFSSSKSAFFAN+           T   +AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+G+SIGKTVKSFQQ
Subjt:  MMLSSATLPFTSSIPR----PPFSSSKSAFFANNG----------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQ

Query:  AAKEFESELKKERARM-------------EGQDLKVSNQKESV
        AAKEFESELKKE   +             E QD+KVSNQKESV
Subjt:  AAKEFESELKKERARM-------------EGQDLKVSNQKESV

XP_022932561.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita moschata]1.2e-3462.42Show/hide
Query:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI
        M++SSATL FTSSIPR     PPFSSSKS+FFANN T                        D+AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+
Subjt:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI

Query:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV
        G+SIGKTVKSFQQAAKEFESELKKE   +              E QDLKVSNQKESV
Subjt:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV

XP_023529222.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita pepo subsp. pepo]1.2e-3462.42Show/hide
Query:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI
        M++SSATL FTSSIPR     PPFSSSKS+FFANN T                        D+AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+
Subjt:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI

Query:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV
        G+SIGKTVKSFQQAAKEFESELKKE   +              E QDLKVSNQKESV
Subjt:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV

TrEMBL top hitse value%identityAlignment
A0A0A0LWL1 Uncharacterized protein2.2e-3158.86Show/hide
Query:  MMLSSATLPFTSSIPR------PPFSSSKSAFFANNG----------------------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPE
        M++SS TL FTSSIP+      P FSSSKSAFFANN                       T T   HKG TCNALFGLGVPEL  I GVAALVFGPKKLPE
Subjt:  MMLSSATLPFTSSIPR------PPFSSSKSAFFANNG----------------------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPE

Query:  IGRSIGKTVKSFQQAAKEFESELKKE--------------RARMEGQDLKVSNQKESV
        +G+SIGKTVKSFQQAAKEFESELKKE                  E QDLKVSNQKE+V
Subjt:  IGRSIGKTVKSFQQAAKEFESELKKE--------------RARMEGQDLKVSNQKESV

A0A1S3BPB0 sec-independent protein translocase protein TATA, chloroplastic2.2e-3158.86Show/hide
Query:  MMLSSATLPFTSSIPR------PPFSSSKSAFFANNG----------------------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPE
        M++S+ TL FTSSIP+      P FSSSKSAFFANN                       T T   HKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE
Subjt:  MMLSSATLPFTSSIPR------PPFSSSKSAFFANNG----------------------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPE

Query:  IGRSIGKTVKSFQQAAKEFESELKKERARME--------------GQDLKVSNQKESV
        +G+SIGKTVKSFQQAAKEFESELKKE    E               QDLKVSNQKE+V
Subjt:  IGRSIGKTVKSFQQAAKEFESELKKERARME--------------GQDLKVSNQKESV

A0A6J1DX34 sec-independent protein translocase protein TATA, chloroplastic7.4e-3566.43Show/hide
Query:  MMLSSATLPFTSSIPR----PPFSSSKSAFFANNG----------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQ
        M++SSATL FTSS+PR    PPFSSSKSAFFAN+           T   +AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+G+SIGKTVKSFQQ
Subjt:  MMLSSATLPFTSSIPR----PPFSSSKSAFFANNG----------TNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQ

Query:  AAKEFESELKKERARM-------------EGQDLKVSNQKESV
        AAKEFESELKKE   +             E QD+KVSNQKESV
Subjt:  AAKEFESELKKERARM-------------EGQDLKVSNQKESV

A0A6J1EWP2 sec-independent protein translocase protein TATA, chloroplastic5.6e-3562.42Show/hide
Query:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI
        M++SSATL FTSSIPR     PPFSSSKS+FFANN T                        D+AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+
Subjt:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI

Query:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV
        G+SIGKTVKSFQQAAKEFESELKKE   +              E QDLKVSNQKESV
Subjt:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV

A0A6J1HYU6 sec-independent protein translocase protein TATA, chloroplastic8.1e-3461.15Show/hide
Query:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI
        M++SSATL FTSSIPR     PP SSSKS+FFANN T                        D+AHKGLTCNALFGLGVPEL  I GVAALVFGPKKLPE+
Subjt:  MMLSSATLPFTSSIPR-----PPFSSSKSAFFANNGT----------------------NTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEI

Query:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV
        G+SIGKTVKSFQQAAKEFESELKKE   +              E QDLK SNQKESV
Subjt:  GRSIGKTVKSFQQAAKEFESELKKERARM--------------EGQDLKVSNQKESV

SwissProt top hitse value%identityAlignment
Q31RR1 Sec-independent protein translocase protein TatA1.3e-1263.46Show/hide
Query:  FGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKE
        FG+G+PE+  I  +A LVFGPKKLPEIGRS+GK ++ FQ A++EFESE+K+E
Subjt:  FGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKE

Q75GK3 Sec-independent protein translocase protein TATA, chloroplastic1.9e-1987.5Show/hide
Query:  CNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKE
        C  LFGLGVPEL  I GVAALVFGPK+LPEIGRSIGKTVKSFQQAAKEFE+ELKKE
Subjt:  CNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKE

Q9LKU2 Sec-independent protein translocase protein TATA, chloroplastic9.6e-2454.89Show/hide
Query:  MMLSSATLPFTSSIPRPPFSSSKSAFFANNGTNT-----------------DKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKS
        M  S ATL     +  P  SSS+S+FF+N  T T                 +   K LTCNALFGLGVPELA I GVAAL+FGPKKLPEIG+SIGKTVKS
Subjt:  MMLSSATLPFTSSIPRPPFSSSKSAFFANNGTNT-----------------DKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKS

Query:  FQQAAKEFESELK--KERARMEGQDLKVSNQKE
        FQQAAKEFESELK   E +  E   +  SN++E
Subjt:  FQQAAKEFESELK--KERARMEGQDLKVSNQKE

Q9XFJ8 Sec-independent protein translocase protein TATA, chloroplastic3.8e-2087.93Show/hide
Query:  LTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKE
        L C  LFGLGVPELA I GVAALVFGPK+LPEIGRSIGKTVKSFQQAAKEFE+ELKKE
Subjt:  LTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKE

Q9XH46 Sec-independent protein translocase protein TATA, chloroplastic1.4e-2251.15Show/hide
Query:  SSATLPFTSSIPRPPFSSSKSAFFANNGTNT---------DKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESE
        SS+ +P  + +P     S+ S   +N+ T++          +  KG TCNA FGLGVPEL  I GVAALVFGPKKLPE+GRSIG+TVKSFQQAAKEFE+E
Subjt:  SSATLPFTSSIPRPPFSSSKSAFFANNGTNT---------DKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESE

Query:  LKKE---------RARMEGQDLKVSNQKESV
        LKKE          +  E Q++KVS+ K++V
Subjt:  LKKE---------RARMEGQDLKVSNQKESV

Arabidopsis top hitse value%identityAlignment
AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf1066.8e-2554.89Show/hide
Query:  MMLSSATLPFTSSIPRPPFSSSKSAFFANNGTNT-----------------DKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKS
        M  S ATL     +  P  SSS+S+FF+N  T T                 +   K LTCNALFGLGVPELA I GVAAL+FGPKKLPEIG+SIGKTVKS
Subjt:  MMLSSATLPFTSSIPRPPFSSSKSAFFANNGTNT-----------------DKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKS

Query:  FQQAAKEFESELK--KERARMEGQDLKVSNQKE
        FQQAAKEFESELK   E +  E   +  SN++E
Subjt:  FQQAAKEFESELK--KERARMEGQDLKVSNQKE

AT5G52440.1 Bacterial sec-independent translocation protein mttA/Hcf1061.1e-0642.37Show/hide
Query:  ALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKERARME
        +LFG+G PE   I  VA LVFGPK L E+ R++GKT+++FQ   +E +   +  ++ +E
Subjt:  ALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKERARME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTCTCATCTGCAACTTTACCCTTCACTTCCTCCATACCCAGACCTCCATTTTCGTCCTCCAAATCCGCCTTCTTCGCCAACAATGGCACTAACACCGATAAAGC
TCACAAGGGTTTGACTTGTAACGCTCTGTTTGGCCTTGGAGTGCCTGAACTTGCTGCAATCACCGGTGTTGCGGCTCTGGTTTTTGGGCCCAAGAAGTTGCCTGAAATTG
GGAGGAGTATTGGCAAAACTGTCAAGAGCTTCCAACAGGCGGCTAAGGAGTTCGAGTCTGAGCTAAAGAAAGAAAGAGCCCGAATGGAGGGGCAAGATTTGAAGGTATCA
AACCAAAAGGAGAGTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTCTCATCTGCAACTTTACCCTTCACTTCCTCCATACCCAGACCTCCATTTTCGTCCTCCAAATCCGCCTTCTTCGCCAACAATGGCACTAACACCGATAAAGC
TCACAAGGGTTTGACTTGTAACGCTCTGTTTGGCCTTGGAGTGCCTGAACTTGCTGCAATCACCGGTGTTGCGGCTCTGGTTTTTGGGCCCAAGAAGTTGCCTGAAATTG
GGAGGAGTATTGGCAAAACTGTCAAGAGCTTCCAACAGGCGGCTAAGGAGTTCGAGTCTGAGCTAAAGAAAGAAAGAGCCCGAATGGAGGGGCAAGATTTGAAGGTATCA
AACCAAAAGGAGAGTGTATGA
Protein sequenceShow/hide protein sequence
MMLSSATLPFTSSIPRPPFSSSKSAFFANNGTNTDKAHKGLTCNALFGLGVPELAAITGVAALVFGPKKLPEIGRSIGKTVKSFQQAAKEFESELKKERARMEGQDLKVS
NQKESV