; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015894 (gene) of Chayote v1 genome

Gene IDSed0015894
OrganismSechium edule (Chayote v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationLG04:44325992..44326849
RNA-Seq ExpressionSed0015894
SyntenySed0015894
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.9e-7148.91Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW  TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GGLGI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.0e-7148.91Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW+ TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GGLGI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.1e-7349.27Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        +KNL   +  FE +SGLKIN+ KS L  +N+S   +   AS WG     LP+SYLG+PLGGNPK   FW    +KI KK + W+YA +SKGGRLTLI+S 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LP Y LSVF+AP   CK IE+L RKFLWKG + + GS+LI W  V+  KE+GGLGI  + V N+ALL KW WR+ ++ ++LWR++I  KY  +FPG+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IPS    S++++PW  I    D   SN  W +NNG    FWY +W+  G L  A  R F+L  +K +SV +AWN
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.0e-7148.91Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW+ TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GGLGI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

TYK28859.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-7048.54Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW+ TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GG+GI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein2.4e-7148.91Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW+ TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GGLGI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein1.4e-7148.91Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW  TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GGLGI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein4.4e-7349.27Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        +KNL   +  FE +SGLKIN+ KS L  +N+S   +   AS WG     LP+SYLG+PLGGNPK   FW    +KI KK + W+YA +SKGGRLTLI+S 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LP Y LSVF+AP   CK IE+L RKFLWKG + + GS+LI W  V+  KE+GGLGI  + V N+ALL KW WR+ ++ ++LWR++I  KY  +FPG+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IPS    S++++PW  I    D   SN  W +NNG    FWY +W+  G L  A  R F+L  +K +SV +AWN
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein2.4e-7148.91Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW+ TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GGLGI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

A0A5D3DZM5 LINE-1 retrotransposable element ORF2 protein5.4e-7148.54Show/hide
Query:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV
        + NL   +  FE +SGL  N SKS +S INIS   +D +AS +G ++  LP++YLG+PLGGNP+  SFW+ TIE IHKK +GW+Y+ +SKGGRLTL+++ 
Subjt:  MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSV

Query:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE
        L +LPTY LS FKAP+SV K IE+  R FLW G +  + ++LI WN+ T PKE GG+GI  +   NQALL KW WR+  + +SLW+K I +KY+    G+
Subjt:  LGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGE

Query:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN
        IP + R+SSA SPW  IK  KD   S I W  N+GS+  FW+  W ++ PL L   R ++L+  +S +V E W+
Subjt:  IPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWN

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.6e-2430.27Show/hide
Query:  IEKIHKKFDGWQYAYLSKGGRLTLIQSVLGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGK
        +E++  +  GW+   LS  GRLTL ++VL ++P + +S    P S+   +++L R FLW    + +  +L++W+ V  PK++GGLG++     N+AL+ K
Subjt:  IEKIHKKFDGWQYAYLSKGGRLTLIQSVLGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGK

Query:  WFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARSPWFHIK-AMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQN
          WR   + +SLW  V+  KY      +   +    S  S W  I   ++D++S  + W   +G    FW   W    PL    N
Subjt:  WFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARSPWFHIK-AMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQN

P93295 Uncharacterized mitochondrial protein AtMg003102.5e-0927.81Show/hide
Query:  LPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKE-KGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIP
        LP Y +S F+    +CK +   M +F W   +  R  + + W  +   KE  GGLG +++   NQALL K  +R      +L  +++ S+Y   FP    
Subjt:  LPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKE-KGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIP

Query:  SICRHSSARS-PWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSW-TDHGPL
          C   +  S  W  I   ++++S  +   + +G +T  W   W  D  PL
Subjt:  SICRHSSARS-PWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSW-TDHGPL

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-2128.04Show/hide
Query:  SSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSVLGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWN
        S  LP+ YLG+PL       S +   +EKI  +   W   +LS  GRL LI SV+ +L  + +S F+ P +  K I+ +   FLW G + N     + W+
Subjt:  SSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSVLGNLPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWN

Query:  VVTLPKEKGGLGIQNIYVHNQ---------ALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSN
         V  PK++GGLGI+++   N+           LG W W+                           I +H             + + S  ++  ++NGSN
Subjt:  VVTLPKEKGGLGIQNIYVHNQ---------ALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSN

Query:  TLFWYHSWTDHGPL
        T FW+ +W+  G L
Subjt:  TLFWYHSWTDHGPL

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-0527.68Show/hide
Query:  VTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARS------PWFHIKAMKDIMSSNIRWKVNNGSNTLFW
        V LPK +GGLG++     N  L  K  WR F+   SLW  V   +Y         S+ +  +++        W  +  ++ +    +R  + NG    FW
Subjt:  VTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARS------PWFHIKAMKDIMSSNIRWKVNNGSNTLFW

Query:  YHSWTDHGPLFL
          +WT  GPL +
Subjt:  YHSWTDHGPLFL

AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-1833.78Show/hide
Query:  LPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKY-SPQFPGEIP
        LPTY ++ F  P +VCK I  ++  F W+   + +G +   W+ ++  K +GG+G ++I   N ALLGK  WR  +  +SL  KV  S+Y     P   P
Subjt:  LPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKY-SPQFPGEIP

Query:  SICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGP
           R S     W  I A ++I+    R  V NG + + W H W D  P
Subjt:  SICRHSSARSPWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSWTDHGP

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-1027.81Show/hide
Query:  LPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKE-KGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIP
        LP Y +S F+    +CK +   M +F W   +  R  + + W  +   KE  GGLG +++   NQALL K  +R      +L  +++ S+Y   FP    
Subjt:  LPTYLLSVFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKE-KGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIP

Query:  SICRHSSARS-PWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSW-TDHGPL
          C   +  S  W  I   ++++S  +   + +G +T  W   W  D  PL
Subjt:  SICRHSSARS-PWFHIKAMKDIMSSNIRWKVNNGSNTLFWYHSW-TDHGPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATTTGCTCCAAATCATTCGTACTTTCGAAGCATCATCTGGTTTGAAGATAAACGTCAGCAAATCAGTGTTGTCTGGTATAAACATTAGCACTAGCTGTTCCGA
TGCCCTAGCAAGCTTATGGGGTTGTAAGTCTTCTCCACTGCCTATCTCCTACCTCGGTATGCCTCTGGGTGGTAACCCCAAAAAGTTATCCTTTTGGGAAGCCACAATCG
AAAAGATTCACAAAAAATTTGACGGCTGGCAATATGCCTATCTATCCAAAGGGGGTAGGCTCACATTGATTCAATCGGTTCTTGGAAATTTGCCCACATATCTTTTATCT
GTTTTCAAAGCTCCTATCTCTGTTTGTAAGGCCATTGAACGTTTAATGCGAAAGTTCTTATGGAAAGGTATTGACAAAAACAGGGGATCAAATTTAATCAGATGGAATGT
GGTGACTCTCCCTAAAGAGAAAGGTGGCTTAGGCATTCAAAATATTTATGTGCATAATCAGGCTTTGCTCGGTAAATGGTTCTGGCGTTTTTTCACCGATGTGGATTCAC
TGTGGAGGAAAGTGATTCTTTCCAAGTATTCCCCCCAGTTTCCTGGAGAAATCCCATCAATCTGTCGTCACAGTAGTGCCCGCTCGCCATGGTTCCACATTAAAGCTATG
AAGGACATCATGTCCTCTAACATTAGATGGAAAGTCAACAACGGCAGCAATACCCTTTTCTGGTATCATTCATGGACGGATCATGGCCCCCTTTTCTTGGCGCAAAACAG
GTTTTTCTCTTTGGCTACCAATAAATCTCTCTCGGTTGCTGAAGCCTGGAATTTGGACACATCTAAAAAAAAAAAAAAAAAAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATTTGCTCCAAATCATTCGTACTTTCGAAGCATCATCTGGTTTGAAGATAAACGTCAGCAAATCAGTGTTGTCTGGTATAAACATTAGCACTAGCTGTTCCGA
TGCCCTAGCAAGCTTATGGGGTTGTAAGTCTTCTCCACTGCCTATCTCCTACCTCGGTATGCCTCTGGGTGGTAACCCCAAAAAGTTATCCTTTTGGGAAGCCACAATCG
AAAAGATTCACAAAAAATTTGACGGCTGGCAATATGCCTATCTATCCAAAGGGGGTAGGCTCACATTGATTCAATCGGTTCTTGGAAATTTGCCCACATATCTTTTATCT
GTTTTCAAAGCTCCTATCTCTGTTTGTAAGGCCATTGAACGTTTAATGCGAAAGTTCTTATGGAAAGGTATTGACAAAAACAGGGGATCAAATTTAATCAGATGGAATGT
GGTGACTCTCCCTAAAGAGAAAGGTGGCTTAGGCATTCAAAATATTTATGTGCATAATCAGGCTTTGCTCGGTAAATGGTTCTGGCGTTTTTTCACCGATGTGGATTCAC
TGTGGAGGAAAGTGATTCTTTCCAAGTATTCCCCCCAGTTTCCTGGAGAAATCCCATCAATCTGTCGTCACAGTAGTGCCCGCTCGCCATGGTTCCACATTAAAGCTATG
AAGGACATCATGTCCTCTAACATTAGATGGAAAGTCAACAACGGCAGCAATACCCTTTTCTGGTATCATTCATGGACGGATCATGGCCCCCTTTTCTTGGCGCAAAACAG
GTTTTTCTCTTTGGCTACCAATAAATCTCTCTCGGTTGCTGAAGCCTGGAATTTGGACACATCTAAAAAAAAAAAAAAAAAAATATAG
Protein sequenceShow/hide protein sequence
MKNLLQIIRTFEASSGLKINVSKSVLSGINISTSCSDALASLWGCKSSPLPISYLGMPLGGNPKKLSFWEATIEKIHKKFDGWQYAYLSKGGRLTLIQSVLGNLPTYLLS
VFKAPISVCKAIERLMRKFLWKGIDKNRGSNLIRWNVVTLPKEKGGLGIQNIYVHNQALLGKWFWRFFTDVDSLWRKVILSKYSPQFPGEIPSICRHSSARSPWFHIKAM
KDIMSSNIRWKVNNGSNTLFWYHSWTDHGPLFLAQNRFFSLATNKSLSVAEAWNLDTSKKKKKKI