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Sed0015912 (gene) of Chayote v1 genome

Gene IDSed0015912
OrganismSechium edule (Chayote v1)
DescriptionAPO protein 2, chloroplastic
Genome locationLG08:3954497..3956752
RNA-Seq ExpressionSed0015912
SyntenySed0015912
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR023342 - APO domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589769.1 APO protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-8061.75Show/hide
Query:  DSLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  IS+F     SK MISSWKI  S S  +R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGL VK +IPIAYNV+
Subjt:  DSLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLLKVV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA +DLPEYP KRRRK II ISKSEFIDAD+SELPDPEPE PL+ LLTEIPDS+V+A  D+EDIAWLADQT + WE+MRQ
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

KAG7023442.1 APO protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.4e-8061.75Show/hide
Query:  DSLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  IS+F     SK MISSWKI  S S  +R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGL VK +IPIAYNV+
Subjt:  DSLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLLKVV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA +DLPEYP KRRRK II ISKSEFIDAD+SELPDPEPE PL+ LLTEIPDS+V+A  D+EDIAWLADQT + WE+MRQ
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

XP_022988576.1 APO protein 2, chloroplastic [Cucurbita maxima]2.8e-8161.75Show/hide
Query:  DSLSTISSFISKC----MISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  IS+F SK     MISSWKI  S SC +R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGL VK +IPIAYNV+
Subjt:  DSLSTISSFISKC----MISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLLKVV V            P    ++ C       +G       GL +  ++  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA ++LPEYP KRRRK II ISKSEFIDAD+SELPDPEPE PL+ LLTEIPDS+V+A  D+EDIAWLADQT + WE+MRQ
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

XP_023516533.1 APO protein 2, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-8162.11Show/hide
Query:  DSLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  IS+F     SK MISSWKI  S SC +R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGL VK +IPIAYNV+
Subjt:  DSLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLLKVV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA +DLPEYP KRRRK II ISKSEFIDAD+SELPDPEPE PL+ LLTEIPDS+V+A  D+EDIAWLADQT + WE+MRQ
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

XP_038880638.1 APO protein 2, chloroplastic [Benincasa hispida]3.5e-8462.81Show/hide
Query:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  IS+F    +SKC I+SWKI  S SCV+R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGLLVK +IPIAYNV+
Subjt:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLL VV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA +DLPEYP KRRRK II ISKSEFIDAD+SELPDPEPEVPL+ LLTEIPDS+V+A  D+EDIAWLADQT + WEKMRQ
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LTB5 Uncharacterized protein1.1e-8058.11Show/hide
Query:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQ----NYKLPPPKNGLLVKRVIPIAYNVY
        DSL  +S+F    ++K  ISSWKI  S SCVI+ DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM++       ++PPPKNGLLVK +IPIAY V+
Subjt:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQ----NYKLPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLLKV+ V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ--EDIVFMKPI
        VELCIQA +DLP+YP KRRRK +I ISKSE+IDAD+SELPDPEPEVPL+ LLTEIPDS+ +A  D EDIAWLADQT + WE+MR+  + ++ M P+
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ--EDIVFMKPI

A0A1S3B8J0 APO protein 2, chloroplastic1.3e-7959.65Show/hide
Query:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  +S+F    ++K  ISSWKI  S SCVI+ DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM++   +    +PPPKNGLLVK +IPIAYNV+
Subjt:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITL+N+LKKLLKVV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA +DLP+YP KRRRK I+ ISKSE+IDAD+SELPDPEPEVPL+ LLTEI DS+ +A  D EDIAWLADQT + WE+MR+
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

A0A5A7SV25 APO protein 21.3e-7959.65Show/hide
Query:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  +S+F    ++K  ISSWKI  S SCVI+ DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM++   +    +PPPKNGLLVK +IPIAYNV+
Subjt:  DSLSTISSF----ISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITL+N+LKKLLKVV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA +DLP+YP KRRRK I+ ISKSE+IDAD+SELPDPEPEVPL+ LLTEI DS+ +A  D EDIAWLADQT + WE+MR+
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

A0A6J1E6N3 APO protein 2, chloroplastic5.7e-8061.62Show/hide
Query:  SLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYN
        SL  IS+F     SK MISSWKI  S S  +R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGL VK +IPIAYNV+N
Subjt:  SLSTISSFI----SKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYN

Query:  ARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAVV
        ARITLIN+LKKLLKVV V            P    ++ C       +G       GL +   +  ED  +PVEAYH+YD LG RISH ER+SIPRIPAVV
Subjt:  ARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAVV

Query:  ELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        ELCIQA +DLPEYP KRRRK II ISKSEFIDAD+SELPDPEPE PL+ LLTEIPDS+V+A  D+EDIAWLADQT + WE+MRQ
Subjt:  ELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

A0A6J1JHK9 APO protein 2, chloroplastic1.4e-8161.75Show/hide
Query:  DSLSTISSFISKC----MISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY
        DSL  IS+F SK     MISSWKI  S SC +R DHPQN  F RYYSK+E+KPFPVPIVE+RRA  ERM+    +    +PPPKNGL VK +IPIAYNV+
Subjt:  DSLSTISSFISKC----MISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVY

Query:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV
        NARITLIN+LKKLLKVV V            P    ++ C       +G       GL +  ++  ED  +PVEAYH+YD LG RISH ER+SIPRIPAV
Subjt:  NARITLINSLKKLLKVVHVKLVDIRQHF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAED-QMPVEAYHIYDHLGNRISHYERFSIPRIPAV

Query:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ
        VELCIQA ++LPEYP KRRRK II ISKSEFIDAD+SELPDPEPE PL+ LLTEIPDS+V+A  D+EDIAWLADQT + WE+MRQ
Subjt:  VELCIQACIDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQ

SwissProt top hitse value%identityAlignment
Q8W4A5 APO protein 2, chloroplastic4.8e-6048.84Show/hide
Query:  SCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQ
        S   V+R D PQN    + Y++ E+KPFPVPIV++RRA  ER+++   K    LPPPKNG++VK ++P+AY VYNARI LIN+L +L+KVV V       
Subjt:  SCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQ

Query:  HF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQ-MPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGI
             P    ++ C       +G       GL +  +S  ED  +P+EAYH++D LG RI H ERFSIPR+PAVVELCIQ  +++PE+P KRRRK II I
Subjt:  HF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQ-MPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGI

Query:  SKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMR
         KSEF+DAD++ELPDPEP+ P   LLTE+P S +     EE+   LA++T + WE+MR
Subjt:  SKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMR

Q9FH50 APO protein 3, mitochondrial1.1e-1628.36Show/hide
Query:  SSWKILYSCSCVIRIDHPQNPGF----RRYYSKEEEKPFPVPIVEM-RRAPTE----RMRSQNYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLL
        SS K L +    + +D+ ++P +    +    K E KP+P P+ E+ RRA  E    +++       PP NGLLV  ++ +A+ V+  R  L++ L K++
Subjt:  SSWKILYSCSCVIRIDHPQNPGF----RRYYSKEEEKPFPVPIVEM-RRAPTE----RMRSQNYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLL

Query:  KVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMF--GLLDIHSSHAEDQMPV-------EAYHIYDH-LGNRISHYERFSIPRIPAVVELCIQAC
                    H P +R  +LC  V    QG  +++    G     ++H   +  V       + +H+YD  +  R+ H ERF++P+I AV+ELCIQA 
Subjt:  KVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMF--GLLDIHSSHAEDQMPV-------EAYHIYDH-LGNRISHYERFSIPRIPAVVELCIQAC

Query:  IDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKM
        +DL ++P+KRR K +  I   E    D  ++ D   E+ + S  T I + +     +++ +  L+ +T   W +M
Subjt:  IDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKM

Q9LSZ0 APO protein 4, mitochondrial2.0e-0529.51Show/hide
Query:  VKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMFGLLD-IHSSHAEDQMPVEAYHIYDHLGNRISHYER
        VK ++P+A  +  AR  LI+++  LLKV  V            +   L    ++  + ++ +    L + +  S  +  +PVE+YH+++     I H ER
Subjt:  VKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMFGLLD-IHSSHAEDQMPVEAYHIYDHLGNRISHYER

Query:  FSIPRIPAVVELCIQACIDLPE
        F   R+PA++ELC QA    PE
Subjt:  FSIPRIPAVVELCIQACIDLPE

Q9XIR4 APO protein 1, chloroplastic6.4e-2032.03Show/hide
Query:  QNPGFRRYYSKEEEKPFPVPIVEMR-RAPTERMRSQ---NYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLC
        QN        K ++KP+P+P  +++  A  ++  +Q     +L PPKNGLLV  ++P+A  V +    LI  L +LL VV V             +   C
Subjt:  QNPGFRRYYSKEEEKPFPVPIVEMR-RAPTERMRSQ---NYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLC

Query:  LNVMKLMQGFVMKSMFGLLDI--HSSHA-------EDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGISKSEFI
          V     G  ++   G  +     SH+       +  +PVE+YH+YD  G RI H  RF   RIPA+VELCIQA +++PEYP +RR + I  + K    
Subjt:  LNVMKLMQGFVMKSMFGLLDI--HSSHA-------EDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGISKSEFI

Query:  DADKSELPD-PEPEVPLQSLLTEIPDSNVIASI---DEEDIAWLADQTFRVWEKMR
             + P+ P+    L S L E+    V         EDI  +A +T   +EK+R
Subjt:  DADKSELPD-PEPEVPLQSLLTEIPDSNVIASI---DEEDIAWLADQTFRVWEKMR

Arabidopsis top hitse value%identityAlignment
AT1G64810.1 Arabidopsis thaliana protein of unknown function (DUF794)4.5e-2132.03Show/hide
Query:  QNPGFRRYYSKEEEKPFPVPIVEMR-RAPTERMRSQ---NYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLC
        QN        K ++KP+P+P  +++  A  ++  +Q     +L PPKNGLLV  ++P+A  V +    LI  L +LL VV V             +   C
Subjt:  QNPGFRRYYSKEEEKPFPVPIVEMR-RAPTERMRSQ---NYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLC

Query:  LNVMKLMQGFVMKSMFGLLDI--HSSHA-------EDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGISKSEFI
          V     G  ++   G  +     SH+       +  +PVE+YH+YD  G RI H  RF   RIPA+VELCIQA +++PEYP +RR + I  + K    
Subjt:  LNVMKLMQGFVMKSMFGLLDI--HSSHA-------EDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGISKSEFI

Query:  DADKSELPD-PEPEVPLQSLLTEIPDSNVIASI---DEEDIAWLADQTFRVWEKMR
             + P+ P+    L S L E+    V         EDI  +A +T   +EK+R
Subjt:  DADKSELPD-PEPEVPLQSLLTEIPDSNVIASI---DEEDIAWLADQTFRVWEKMR

AT1G64810.2 Arabidopsis thaliana protein of unknown function (DUF794)4.5e-2132.03Show/hide
Query:  QNPGFRRYYSKEEEKPFPVPIVEMR-RAPTERMRSQ---NYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLC
        QN        K ++KP+P+P  +++  A  ++  +Q     +L PPKNGLLV  ++P+A  V +    LI  L +LL VV V             +   C
Subjt:  QNPGFRRYYSKEEEKPFPVPIVEMR-RAPTERMRSQ---NYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQHFPRNRSWQLC

Query:  LNVMKLMQGFVMKSMFGLLDI--HSSHA-------EDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGISKSEFI
          V     G  ++   G  +     SH+       +  +PVE+YH+YD  G RI H  RF   RIPA+VELCIQA +++PEYP +RR + I  + K    
Subjt:  LNVMKLMQGFVMKSMFGLLDI--HSSHA-------EDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGISKSEFI

Query:  DADKSELPD-PEPEVPLQSLLTEIPDSNVIASI---DEEDIAWLADQTFRVWEKMR
             + P+ P+    L S L E+    V         EDI  +A +T   +EK+R
Subjt:  DADKSELPD-PEPEVPLQSLLTEIPDSNVIASI---DEEDIAWLADQTFRVWEKMR

AT5G57930.1 Arabidopsis thaliana protein of unknown function (DUF794)3.4e-6148.84Show/hide
Query:  SCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQ
        S   V+R D PQN    + Y++ E+KPFPVPIV++RRA  ER+++   K    LPPPKNG++VK ++P+AY VYNARI LIN+L +L+KVV V       
Subjt:  SCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQ

Query:  HF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQ-MPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGI
             P    ++ C       +G       GL +  +S  ED  +P+EAYH++D LG RI H ERFSIPR+PAVVELCIQ  +++PE+P KRRRK II I
Subjt:  HF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQ-MPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGI

Query:  SKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMR
         KSEF+DAD++ELPDPEP+ P   LLTE+P S +     EE+   LA++T + WE+MR
Subjt:  SKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMR

AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794)3.4e-6148.84Show/hide
Query:  SCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQ
        S   V+R D PQN    + Y++ E+KPFPVPIV++RRA  ER+++   K    LPPPKNG++VK ++P+AY VYNARI LIN+L +L+KVV V       
Subjt:  SCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYK----LPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLLKVVHVKLVDIRQ

Query:  HF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQ-MPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGI
             P    ++ C       +G       GL +  +S  ED  +P+EAYH++D LG RI H ERFSIPR+PAVVELCIQ  +++PE+P KRRRK II I
Subjt:  HF---PRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQ-MPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIGI

Query:  SKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMR
         KSEF+DAD++ELPDPEP+ P   LLTE+P S +     EE+   LA++T + WE+MR
Subjt:  SKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMR

AT5G61930.1 Arabidopsis thaliana protein of unknown function (DUF794)8.0e-1828.36Show/hide
Query:  SSWKILYSCSCVIRIDHPQNPGF----RRYYSKEEEKPFPVPIVEM-RRAPTE----RMRSQNYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLL
        SS K L +    + +D+ ++P +    +    K E KP+P P+ E+ RRA  E    +++       PP NGLLV  ++ +A+ V+  R  L++ L K++
Subjt:  SSWKILYSCSCVIRIDHPQNPGF----RRYYSKEEEKPFPVPIVEM-RRAPTE----RMRSQNYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLKKLL

Query:  KVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMF--GLLDIHSSHAEDQMPV-------EAYHIYDH-LGNRISHYERFSIPRIPAVVELCIQAC
                    H P +R  +LC  V    QG  +++    G     ++H   +  V       + +H+YD  +  R+ H ERF++P+I AV+ELCIQA 
Subjt:  KVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMF--GLLDIHSSHAEDQMPV-------EAYHIYDH-LGNRISHYERFSIPRIPAVVELCIQAC

Query:  IDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKM
        +DL ++P+KRR K +  I   E    D  ++ D   E+ + S  T I + +     +++ +  L+ +T   W +M
Subjt:  IDLPEYPTKRRRKSIIGISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTAGTTCTTGTAACGACTCTCTTAGCACTATTTCATCTTTCATATCCAAATGTATGATTTCATCATGGAAAATTCTGTATTCATGTTCATGTGTTATAAGGAT
TGATCATCCTCAAAACCCCGGTTTTCGCCGGTACTATTCCAAGGAGGAGGAGAAGCCATTTCCAGTTCCCATTGTCGAAATGAGACGAGCTCCCACGGAGAGGATGAGGA
GCCAAAATTACAAATTACCACCTCCAAAGAATGGTTTGCTAGTTAAGAGAGTGATACCAATTGCATACAATGTATACAATGCGAGAATTACATTGATCAATAGTCTCAAA
AAGCTCTTAAAAGTGGTACATGTTAAGCTTGTGGATATCCGGCAACATTTTCCTCGAAACAGATCTTGGCAACTTTGTCTAAATGTGATGAAACTTATGCAGGGTTTTGT
AATGAAATCCATGTTTGGCCTGTTGGACATCCATTCAAGTCATGCAGAGGACCAAATGCCAGTAGAAGCATACCACATCTACGATCACCTCGGGAACCGTATTTCTCATT
ACGAAAGATTCTCAATTCCTCGTATCCCAGCAGTGGTTGAGTTGTGCATTCAAGCATGTATTGATCTTCCTGAATATCCTACAAAGAGGAGAAGGAAATCAATCATCGGC
ATCTCGAAAAGTGAGTTCATTGATGCAGATAAAAGTGAACTACCAGACCCTGAACCAGAAGTGCCACTGCAATCACTGTTAACAGAAATACCAGACTCCAATGTCATTGC
CTCGATCGACGAAGAAGATATAGCTTGGCTTGCTGATCAAACTTTTCGAGTATGGGAGAAAATGAGGCAAGAAGATATAGTGTTTATGAAACCTATCTATCTTTTGCACT
GCTATCAACTTGAAGCATCTGTGTTAAACAAATTATGTTTCCATTATATAATTTGTATATTATTCAAACTTCCTAATTTCAACTTTATAATATTATGTTTGTTACAACTT
TTTTACAATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTAGTTCTTGTAACGACTCTCTTAGCACTATTTCATCTTTCATATCCAAATGTATGATTTCATCATGGAAAATTCTGTATTCATGTTCATGTGTTATAAGGAT
TGATCATCCTCAAAACCCCGGTTTTCGCCGGTACTATTCCAAGGAGGAGGAGAAGCCATTTCCAGTTCCCATTGTCGAAATGAGACGAGCTCCCACGGAGAGGATGAGGA
GCCAAAATTACAAATTACCACCTCCAAAGAATGGTTTGCTAGTTAAGAGAGTGATACCAATTGCATACAATGTATACAATGCGAGAATTACATTGATCAATAGTCTCAAA
AAGCTCTTAAAAGTGGTACATGTTAAGCTTGTGGATATCCGGCAACATTTTCCTCGAAACAGATCTTGGCAACTTTGTCTAAATGTGATGAAACTTATGCAGGGTTTTGT
AATGAAATCCATGTTTGGCCTGTTGGACATCCATTCAAGTCATGCAGAGGACCAAATGCCAGTAGAAGCATACCACATCTACGATCACCTCGGGAACCGTATTTCTCATT
ACGAAAGATTCTCAATTCCTCGTATCCCAGCAGTGGTTGAGTTGTGCATTCAAGCATGTATTGATCTTCCTGAATATCCTACAAAGAGGAGAAGGAAATCAATCATCGGC
ATCTCGAAAAGTGAGTTCATTGATGCAGATAAAAGTGAACTACCAGACCCTGAACCAGAAGTGCCACTGCAATCACTGTTAACAGAAATACCAGACTCCAATGTCATTGC
CTCGATCGACGAAGAAGATATAGCTTGGCTTGCTGATCAAACTTTTCGAGTATGGGAGAAAATGAGGCAAGAAGATATAGTGTTTATGAAACCTATCTATCTTTTGCACT
GCTATCAACTTGAAGCATCTGTGTTAAACAAATTATGTTTCCATTATATAATTTGTATATTATTCAAACTTCCTAATTTCAACTTTATAATATTATGTTTGTTACAACTT
TTTTACAATTCTTAA
Protein sequenceShow/hide protein sequence
MDCSSCNDSLSTISSFISKCMISSWKILYSCSCVIRIDHPQNPGFRRYYSKEEEKPFPVPIVEMRRAPTERMRSQNYKLPPPKNGLLVKRVIPIAYNVYNARITLINSLK
KLLKVVHVKLVDIRQHFPRNRSWQLCLNVMKLMQGFVMKSMFGLLDIHSSHAEDQMPVEAYHIYDHLGNRISHYERFSIPRIPAVVELCIQACIDLPEYPTKRRRKSIIG
ISKSEFIDADKSELPDPEPEVPLQSLLTEIPDSNVIASIDEEDIAWLADQTFRVWEKMRQEDIVFMKPIYLLHCYQLEASVLNKLCFHYIICILFKLPNFNFIILCLLQL
FYNS