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Sed0015935 (gene) of Chayote v1 genome

Gene IDSed0015935
OrganismSechium edule (Chayote v1)
Descriptionjosephin-like protein
Genome locationLG14:6546763..6547411
RNA-Seq ExpressionSed0015935
SyntenySed0015935
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595400.1 hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3067.74Show/hide
Query:  MSKI--SRRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME
        MSKI  SR VS  SD+ T K  A+ R++KRVI V WVFRLPKS  FSPESFLRR+GAKVAKVLR VSLKK+S+ SK ++     + ++FNRS SVSDSME
Subjt:  MSKI--SRRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME

Query:  ESHRAEAVKDCIQFFNSSSTSSAV
        ESHRAEAV+DCI FFNSSS+SSA+
Subjt:  ESHRAEAVKDCIQFFNSSSTSSAV

KAG6603596.1 hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2967.2Show/hide
Query:  SRRVSFSSDQ-----ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKS----SKNSNGSGSGSGSDFNRSRSVSD
        SRRVSFSSDQ     +  K AA  R++KR+I VFWVFRLPKS    P SFLRRIGAKV KVLRYVSL+K+S S    S +S+ S   SGS+FNRS SVS+
Subjt:  SRRVSFSSDQ-----ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKS----SKNSNGSGSGSGSDFNRSRSVSD

Query:  SMEESHRAEAVKDCIQFFNSSSTSS
        SMEESHRAEAVKDCI FFNSSS+S+
Subjt:  SMEESHRAEAVKDCIQFFNSSSTSS

KGN54361.1 hypothetical protein Csa_017994 [Cucumis sativus]1.5e-3275.42Show/hide
Query:  RRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSD-FNRSRSVSDSMEESHRAE
        RRVSFSSDQA   AAA +R +KR I VFWVFRLPKSA FSPE FLRR+GAK+AKVLRYVSL+K+S SS NS+   + +GS  FNRS SVSDSMEESHRAE
Subjt:  RRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSD-FNRSRSVSDSMEESHRAE

Query:  AVKDCIQFFNSSSTSSAV
        AVKDCIQFFNSS++SSAV
Subjt:  AVKDCIQFFNSSSTSSAV

XP_022950374.1 josephin-like protein [Cucurbita moschata]2.2e-2868.03Show/hide
Query:  SRRVSFSSDQ------ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME
        SRRVSFSSDQ      +  K AA  R++KR+I VFWVFRLPKS    P SFLRRIGAKV KVLRYVSL+K+S S  +S  S   SGS+FNRS SVS+SME
Subjt:  SRRVSFSSDQ------ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME

Query:  ESHRAEAVKDCIQFFNSSSTSS
        ESHRAEAVKDCI FFNSSS+S+
Subjt:  ESHRAEAVKDCIQFFNSSSTSS

XP_023518083.1 uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]4.1e-3067.21Show/hide
Query:  MSKI--SRRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME
        MSKI  SR VS  SD+ T K   + R++KRVI V WVFRLPKS  FSPESFLRR+GAKVAKV+RYVSLKK+S+ SK ++     + ++FNRS SVSDSME
Subjt:  MSKI--SRRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME

Query:  ESHRAEAVKDCIQFFNSSSTSS
        ESHRAEAVKDCI FFNSSS+S+
Subjt:  ESHRAEAVKDCIQFFNSSSTSS

TrEMBL top hitse value%identityAlignment
A0A061EQH2 Uncharacterized protein1.9e-1243.31Show/hide
Query:  KISRRVSFSSD---------QATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSV
        + S+RVSFS D         +          +++RV+A  + FRL +S+ FSP   LRR+GAKVA+ LR+VS+++ S S K S+     S S+  RSRS+
Subjt:  KISRRVSFSSD---------QATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSV

Query:  SDSMEESHRAEAVKDCIQFFNSSSTSS
        ++S+ +SHRAEA++DCI+F NSSS+ S
Subjt:  SDSMEESHRAEAVKDCIQFFNSSSTSS

A0A0A0L2K7 Uncharacterized protein7.2e-3375.42Show/hide
Query:  RRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSD-FNRSRSVSDSMEESHRAE
        RRVSFSSDQA   AAA +R +KR I VFWVFRLPKSA FSPE FLRR+GAK+AKVLRYVSL+K+S SS NS+   + +GS  FNRS SVSDSMEESHRAE
Subjt:  RRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSD-FNRSRSVSDSMEESHRAE

Query:  AVKDCIQFFNSSSTSSAV
        AVKDCIQFFNSS++SSAV
Subjt:  AVKDCIQFFNSSSTSSAV

A0A5B7C456 Putative josephin-like protein (Fragment)8.3e-1346.77Show/hide
Query:  KISRRVSFSSD--------QATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVS
        K+SRRV+FS D        Q       VA ++KR+ A  W FRLPKS+ FSP   L+ IGAKVA+VL  +S+KK+S        S   S +   RSRS +
Subjt:  KISRRVSFSSD--------QATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVS

Query:  DSMEESHRAEAVKDCIQFFNSSST
        D + +SHRAEA++DCI+F NSSS+
Subjt:  DSMEESHRAEAVKDCIQFFNSSST

A0A6J1GFL9 josephin-like protein1.1e-2868.03Show/hide
Query:  SRRVSFSSDQ------ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME
        SRRVSFSSDQ      +  K AA  R++KR+I VFWVFRLPKS    P SFLRRIGAKV KVLRYVSL+K+S S  +S  S   SGS+FNRS SVS+SME
Subjt:  SRRVSFSSDQ------ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSME

Query:  ESHRAEAVKDCIQFFNSSSTSS
        ESHRAEAVKDCI FFNSSS+S+
Subjt:  ESHRAEAVKDCIQFFNSSSTSS

A0A6J1IJN3 uncharacterized protein LOC1114777031.4e-2868.33Show/hide
Query:  SRRVSFSSDQ----ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGS-GSGSDFNRSRSVSDSMEE
        SRRVSFSSDQ    A  K AA  R++KR+I VFWVF+LPKS    P SFLRRIGAKV KVLRYVSL+K+S S  + + S S  SGS+FNRS SVS+SMEE
Subjt:  SRRVSFSSDQ----ATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGS-GSGSDFNRSRSVSDSMEE

Query:  SHRAEAVKDCIQFFNSSSTS
        SHRAEAVKDCI FFNSSS++
Subjt:  SHRAEAVKDCIQFFNSSSTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07300.1 josephin protein-related2.2e-0536.59Show/hide
Query:  RLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSMEESHRAEAVKDCIQFFNSSST
        RLP+    +    ++ +G K AK LR V ++KK +S  +   S SG          +     +SHR+EA++DCIQF NSSS+
Subjt:  RLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSMEESHRAEAVKDCIQFFNSSST

AT3G09032.1 unknown protein4.4e-0632.28Show/hide
Query:  RRVSFS-SDQAT-----PKAAAVARS--KKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSK--------NSNGSGSGSGSDFNR
        +RVSF+ + +AT     PK   ++ S   +R + +  +      +  +    ++RIGA+ AK LR++S ++ +   +        +S+ S S S     R
Subjt:  RRVSFS-SDQAT-----PKAAAVARS--KKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSK--------NSNGSGSGSGSDFNR

Query:  SRSVSDSMEESHRAEAVKDCIQFFNSS
        S+SV+++  ESHRAEA++DCI+F NSS
Subjt:  SRSVSDSMEESHRAEAVKDCIQFFNSS

AT5G01225.1 unknown protein8.8e-0733.06Show/hide
Query:  KISRRVSFSSDQAT------PKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDS
        + S+RV FS D         P  ++    ++RV+   + F    S   + +  LR IG +V K  RY+S  + +  +  S+ S   S     +S+S++ S
Subjt:  KISRRVSFSSDQAT------PKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDS

Query:  MEESHRAEAVKDCIQFFNSSSTSS
          ESHRAEA++DCI+F NS S+ S
Subjt:  MEESHRAEAVKDCIQFFNSSSTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAATAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCCACGCCCAAGGCCGCCGCCGTGGCAAGAAGCAAGAAACGAGTGATCGCCGTGTTCTGGGTTTTCCG
GCTGCCGAAATCCGCCGGATTCTCGCCGGAAAGTTTCCTCCGCCGCATCGGCGCTAAAGTGGCCAAAGTTCTACGCTACGTGTCTTTGAAAAAAAAATCAAAATCTTCCA
AAAATAGTAACGGGTCGGGTTCGGGTTCGGGTTCCGATTTTAACCGATCCCGTTCGGTTTCAGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATC
CAGTTCTTCAACTCTTCTTCTACTTCTTCAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTCTCTATTTTTCTCTCCTCACATTTTCAAAAAAAAAAAGAAAAATTCATAAAAAAAAATGTCAAAAATAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCCACGC
CCAAGGCCGCCGCCGTGGCAAGAAGCAAGAAACGAGTGATCGCCGTGTTCTGGGTTTTCCGGCTGCCGAAATCCGCCGGATTCTCGCCGGAAAGTTTCCTCCGCCGCATC
GGCGCTAAAGTGGCCAAAGTTCTACGCTACGTGTCTTTGAAAAAAAAATCAAAATCTTCCAAAAATAGTAACGGGTCGGGTTCGGGTTCGGGTTCCGATTTTAACCGATC
CCGTTCGGTTTCAGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTACTTCTTCAGCTGTTTGATTTTTTATTT
TTTTTTAATCTGAATTTATCAATGATACTTCTGTAACTTTTAAGGTAAATTTCCTCAATTATTAGTATTATTATTATTATTTTTTTCTAAAATGGTTAAATGAGTGTTCT
TTTTTTTTTTTTTTAAGGAGGTTAAATGAGTGTAGTTCTTCAACTTTTTGGGTTGTGTATTTAACTTGTGAAATAAATTTGAATGGGTTTATGAAGTGG
Protein sequenceShow/hide protein sequence
MSKISRRVSFSSDQATPKAAAVARSKKRVIAVFWVFRLPKSAGFSPESFLRRIGAKVAKVLRYVSLKKKSKSSKNSNGSGSGSGSDFNRSRSVSDSMEESHRAEAVKDCI
QFFNSSSTSSAV