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Sed0015955 (gene) of Chayote v1 genome

Gene IDSed0015955
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:41129429..41129881
RNA-Seq ExpressionSed0015955
SyntenySed0015955
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599936.1 hypothetical protein SDJN03_05169, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3175Show/hide
Query:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQY
        AAA RCVS GGWG SVAEL+REL+   EGEEW     L EKCG GG+G+VELLE LEREAIM  DEGRDPTDY+RRAKIFSTSSRVFQALKQHSD ES+ 
Subjt:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQY

Query:  VGIEEEEG
           EEEEG
Subjt:  VGIEEEEG
KAG7030615.1 hypothetical protein SDJN02_04652, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3175Show/hide
Query:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQY
        AAA RCVS GGWG SV EL+REL+   EGEEW     L EKCG GG+G+VELLE LEREAIMG DEGRDPTDY+RRAKIFSTSSRVFQALKQHSD ES+ 
Subjt:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQY

Query:  VGIEEEEG
           EEEEG
Subjt:  VGIEEEEG
XP_022941969.1 uncharacterized protein LOC111447176 [Cucurbita moschata]7.1e-3278.79Show/hide
Query:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQ
        AAA RCVSQGGWG SVAEL+REL+   EGEEW     L EKCG GG+G+VELLE LEREAIMG DEGRDPTDY+RRAKIFSTSSRVFQALKQHSD ES+
Subjt:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQ
XP_023541783.1 uncharacterized protein LOC111801831 [Cucurbita pepo subsp. pepo]5.1e-3075.51Show/hide
Query:  AAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQ
        AA RCVSQGGWG SVAEL+RE +   EGEEW     L EKCG GG+G+VELLE LEREAIMG DEGRDPT+Y+RRAKIFSTSSRVFQALK+HSD ES+
Subjt:  AAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQ
XP_023547061.1 uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo]2.5e-2978.12Show/hide
Query:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
        AAAA RCVSQGGWGGSV        AE E EEW     L EKCGGGG+GVVELLECLEREAIMG DEGR+PTDYNRRAKIFSTSS VFQALKQHSD
Subjt:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
TrEMBL top hitse value%identityAlignment
A0A0A0KQQ4 Uncharacterized protein6.7e-2870.71Show/hide
Query:  PLPAAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
        P  A A  RCVSQGGWG SV         E + EEW     L EKCGGGG+G+VELLECLE+EAIMG DEGRDPTDYNRRAKIFSTSS VFQALKQHSD
Subjt:  PLPAAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
A0A5D3DSR0 Uncharacterized protein1.8e-2568.75Show/hide
Query:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
        A    RCVSQGGWG SVAE+        + EEW     L EKCG GG+G+VELLECLE+EAIMG DEGR+PTDYNRRAKIFSTSS VFQALKQH D
Subjt:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
A0A6J1FPZ7 uncharacterized protein LOC1114471763.4e-3278.79Show/hide
Query:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQ
        AAA RCVSQGGWG SVAEL+REL+   EGEEW     L EKCG GG+G+VELLE LEREAIMG DEGRDPTDY+RRAKIFSTSSRVFQALKQHSD ES+
Subjt:  AAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQ
A0A6J1FW01 uncharacterized protein LOC1114478171.2e-2978.12Show/hide
Query:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
        AAAA RCVSQGGWGGSV        AE E EEW     L EKCGGGG+GVVELLECLEREAIMG DEGR+PTDYNRRAKIFSTSS VFQALKQHSD
Subjt:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEW-----LVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
A0A6J1JM89 uncharacterized protein LOC1114859331.2e-2978.12Show/hide
Query:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEWLV-----EKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
        AAAA RCVSQGGWGGSV        AE E EEWL      EKCGGGG+GVVELLECLEREAIMG DEGR+PTDYNRRAKIFSTSS VFQALKQHSD
Subjt:  AAAAKRCVSQGGWGGSVAELKRELAAEAEGEEWLV-----EKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein8.4e-1550.54Show/hide
Query:  AAKRCVSQGGWGGSVAELKRELAAEAEGEEWLVEK---CGGG-GQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD
        AA RCV+ G    +  E         E EE L ++   CGG   +GV ELLECLE+EAIMG D+GRDP DYNRRAKIF  SS++F+ L +  D
Subjt:  AAKRCVSQGGWGGSVAELKRELAAEAEGEEWLVEK---CGGG-GQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTCTCTGCCTCTCTTTTTAAACCGCCGCTGCCGGCTGCGGCAGCAAAGAGATGTGTTAGTCAGGGTGGATGGGGAGGCTCTGTGGCGGAGCTGAAGAGGGAATT
GGCGGCGGAGGCAGAGGGAGAAGAGTGGCTGGTGGAAAAGTGCGGCGGTGGAGGACAGGGAGTGGTGGAGCTGCTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGTAG
ATGAAGGTAGAGATCCTACTGATTACAATAGGAGGGCTAAGATTTTCAGTACCAGCTCTAGAGTTTTTCAAGCTCTCAAGCAACATTCTGATCATGAATCTCAATATGTA
GGGATAGAAGAAGAAGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTCTCTGCCTCTCTTTTTAAACCGCCGCTGCCGGCTGCGGCAGCAAAGAGATGTGTTAGTCAGGGTGGATGGGGAGGCTCTGTGGCGGAGCTGAAGAGGGAATT
GGCGGCGGAGGCAGAGGGAGAAGAGTGGCTGGTGGAAAAGTGCGGCGGTGGAGGACAGGGAGTGGTGGAGCTGCTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGTAG
ATGAAGGTAGAGATCCTACTGATTACAATAGGAGGGCTAAGATTTTCAGTACCAGCTCTAGAGTTTTTCAAGCTCTCAAGCAACATTCTGATCATGAATCTCAATATGTA
GGGATAGAAGAAGAAGAAGGATGA
Protein sequenceShow/hide protein sequence
MQVSASLFKPPLPAAAAKRCVSQGGWGGSVAELKRELAAEAEGEEWLVEKCGGGGQGVVELLECLEREAIMGVDEGRDPTDYNRRAKIFSTSSRVFQALKQHSDHESQYV
GIEEEEG