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Sed0015961 (gene) of Chayote v1 genome

Gene IDSed0015961
OrganismSechium edule (Chayote v1)
DescriptionVQ domain-containing protein
Genome locationLG01:3424908..3425822
RNA-Seq ExpressionSed0015961
SyntenySed0015961
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]1.0e-1555.1Show/hide
Query:  MEPHSSSFSFYYSEPPAMPL---KKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYF
        MEPH  SFSFYY++  A      KK VAPP    P+VYKVDP++FRDVVQKLTA PEF D RL AMPPPRPN +D   R        +   VSY+ +F
Subjt:  MEPHSSSFSFYYSEPPAMPL---KKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYF

KAE8651906.1 hypothetical protein Csa_006780 [Cucumis sativus]3.3e-1458.43Show/hide
Query:  MEPHSSSFSFYYSE---PPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDE
        MEPH  SFSFYY +   P     KK VAPP  + P+VYKVDP++FRDVVQKLTA P+F D RL AMPPPRP+ +D   +SS  R+ S E
Subjt:  MEPHSSSFSFYYSE---PPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDE

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2063.74Show/hide
Query:  MEPH-----SSSFSFYYSEPPAM------PLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGR
        MEPH     SSSFSFYYS+P  +        KK VAPP    PRVYKV+P++FRDVVQKLT+PPE+LDPRL AMP PRPN S+PPP SS R
Subjt:  MEPH-----SSSFSFYYSEPPAM------PLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGR

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]2.5e-1455.21Show/hide
Query:  MEPHSSSFSFYYSEPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYFG
        MEPHSSS     S P   P  + VAP     P++YKV+PVDFRDVVQKLTA PEF D RL AMP PRP+   PPP S+   +FS E +V Y  Y G
Subjt:  MEPHSSSFSFYYSEPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYFG

XP_028052843.1 formin-like protein 13 [Camellia sinensis]5.1e-0748.65Show/hide
Query:  PAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSV
        PA P KK +AP     PRVYKVD VDF+ VVQKLTA PEF   RL ++ PP  + S P P ++     SD  ++
Subjt:  PAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSV

TrEMBL top hitse value%identityAlignment
A0A0A0LPS3 VQ domain-containing protein2.2e-1162.12Show/hide
Query:  KKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDE
        KK VAPP  + P+VYKVDP++FRDVVQKLTA P+F D RL AMPPPRP+ +D   +SS  R+ S E
Subjt:  KKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDE

A0A2N9FPV7 VQ domain-containing protein1.2e-0651.61Show/hide
Query:  EPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPP
        +PP+ P KK VAP     PR+YKVDP++FRD+VQKLT   EF   RL ++ PP  N S+  P
Subjt:  EPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPP

A0A4S4EYD7 VQ domain-containing protein2.5e-0748.65Show/hide
Query:  PAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSV
        PA P KK +AP     PRVYKVD VDF+ VVQKLTA PEF   RL ++ PP  + S P P ++     SD  ++
Subjt:  PAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSV

A0A5A7TW54 VQ motif-containing protein 295.0e-1655.1Show/hide
Query:  MEPHSSSFSFYYSEPPAMPL---KKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYF
        MEPH  SFSFYY++  A      KK VAPP    P+VYKVDP++FRDVVQKLTA PEF D RL AMPPPRPN +D   R        +   VSY+ +F
Subjt:  MEPHSSSFSFYYSEPPAMPL---KKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYF

A0A6J1D7B4 VQ motif-containing protein 291.2e-1455.21Show/hide
Query:  MEPHSSSFSFYYSEPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYFG
        MEPHSSS     S P   P  + VAP     P++YKV+PVDFRDVVQKLTA PEF D RL AMP PRP+   PPP S+   +FS E +V Y  Y G
Subjt:  MEPHSSSFSFYYSEPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTCACTCTTCCTCCTTTTCTTTTTACTACTCCGAGCCGCCAGCCATGCCCCTAAAAAAGGGCGTGGCGCCGCCGTCGCGGGCACAGCCTCGGGTTTACAAGGT
CGACCCCGTCGACTTTCGGGATGTTGTTCAGAAGCTTACTGCTCCACCAGAGTTTCTTGATCCCCGCCTCCATGCCATGCCGCCCCCTCGCCCCAATTTCTCCGATCCGC
CGCCAAGGTCTTCCGGCCGCCGGAATTTTTCCGACGAGCGGTCGGTTTCTTATAATGCCTACTTTGGAGACTACTCTTGA
mRNA sequenceShow/hide mRNA sequence
ACACACACACTTTCAAAGTTAATTAAAAACCAAAGTTAAACATGGAACCTCACTCTTCCTCCTTTTCTTTTTACTACTCCGAGCCGCCAGCCATGCCCCTAAAAAAGGGC
GTGGCGCCGCCGTCGCGGGCACAGCCTCGGGTTTACAAGGTCGACCCCGTCGACTTTCGGGATGTTGTTCAGAAGCTTACTGCTCCACCAGAGTTTCTTGATCCCCGCCT
CCATGCCATGCCGCCCCCTCGCCCCAATTTCTCCGATCCGCCGCCAAGGTCTTCCGGCCGCCGGAATTTTTCCGACGAGCGGTCGGTTTCTTATAATGCCTACTTTGGAG
ACTACTCTTGAAAGATGCTTGTATATTGTTGTTCTTTTGGTTTGTTTTTTTTCCTTAGCTTTCACATTGGGAATAATTTTCATTGAATTATGTTTCGTTAAAAAATTATT
AAATTTCATGGATTTGCTATGACAATTTACAATATTTAATAAAGTAATTAACTTGGACAAACTATTTTCATGCTTAAATAAATTTACTGGTCTTCTTTCCATTTTTTTTT
TCATTTTTTACTTAGTTTAATCTTTTATAACTACACATAGAATTAGATTTTCACCCTGAAATCGAATGGATTGATGGATCAATTGGTTATCTGGTTTGTTGATTCCCAGA
ATCCATATTTGTAATCTACTTTCTCCATCTTGTACTAAAAAAAGATTTTCACCTAGAGCATCGGTGTTCATCTCAAAATTCATGGCATAATAATAGATTCTATAATCAAC
CCTCACTTATACATTTTAAATTTGAAAATTTCAAAAAAAAGTATAATACGAAGATCTCAGGTCTCTATCAACGAGCTATTCTCGAAGACATTGAATTTTCTCTGTGTTTC
TCCTAGCTCATTCAGATTTCAATGTTGTAATTTGT
Protein sequenceShow/hide protein sequence
MEPHSSSFSFYYSEPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYFGDYS