; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015968 (gene) of Chayote v1 genome

Gene IDSed0015968
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase
Genome locationLG13:11157939..11158220
RNA-Seq ExpressionSed0015968
SyntenySed0015968
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015387726.1 uncharacterized protein LOC107177802 [Citrus sinensis]5.5e-1159.26Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ
        CV CG+GH +++CP +  SVN+V S +  +Q+NPYSNTYN GWR HPNFSW +Q
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ

XP_030487620.1 uncharacterized protein LOC115704559 [Cannabis sativa]1.9e-1161.11Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ
        CV CGDGH +E+CP + ASV +V +Q+ N  NNPYSN+YN GW++HPNFSW  Q
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]9.4e-1159.26Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ
        CV CGDGH +E+CP + ASV +V +Q+ N  NNPYSN+YN  W++HPNFSW  Q
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]9.4e-1159.26Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ
        CV CGDGH +E+CP + ASV +V +Q+ N  NNPYSN+YN  W++HPNFSW  Q
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ

XP_030510138.1 uncharacterized protein LOC115724905 [Cannabis sativa]9.4e-1159.26Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ
        CV CGDGH +E+CP + ASV +V +Q+ N  NNPYSN+YN  W++HPNFSW  Q
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ

TrEMBL top hitse value%identityAlignment
A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129452.3e-1062.75Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSW
        C +CGD H+Y+ CP++  SV FV +     QNNPYSNTYN GWRNHPNFSW
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSW

A0A6J0ZYV0 uncharacterized protein LOC1104134132.3e-1062.75Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSW
        C +CGD H+Y+ CP++  SV FV +     QNNPYSNTYN GWRNHPNFSW
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSW

A0A6J1EEI2 uncharacterized protein LOC1114333941.0e-1054.1Show/hide
Query:  TLMEPCVLCGDGHAYEDCPHSGASVNFVNSQST--NHQNNPYSNTYNLGWRNHPNFSWRDQ
        T  E CV CG+ H ++ CP + AS+ +V +Q++  N +NNP+SNTYN GWRNHPNFSW+ Q
Subjt:  TLMEPCVLCGDGHAYEDCPHSGASVNFVNSQST--NHQNNPYSNTYNLGWRNHPNFSWRDQ

A0A6J1H7E4 uncharacterized protein LOC1114611681.7e-1054.1Show/hide
Query:  TLMEPCVLCGDGHAYEDCPHSGASVNFVNSQST--NHQNNPYSNTYNLGWRNHPNFSWRDQ
        T  E CV CG+ H ++ CP + AS+ +V +Q++  N +NNP SNTYN GWRNHPNFSW+ Q
Subjt:  TLMEPCVLCGDGHAYEDCPHSGASVNFVNSQST--NHQNNPYSNTYNLGWRNHPNFSWRDQ

U5CZQ0 Uncharacterized protein4.6e-1159.26Show/hide
Query:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ
        CV CGDGH +E+CP + ASV +V +Q+ N  NNPYSN+YN  W++HPNFSW  Q
Subjt:  CVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGAGATGTTGTTGAATCTGCAGAATCAAAATGCTAAGGCAACAGTGAGAAGCATGGAGGCAACACCACTTGGTTCCGCTAATAATCAGGCGCAACCAACTTTGAT
GGAACCATGCGTTCTATGCGGCGATGGTCACGCATATGAAGATTGCCCTCATAGCGGTGCTTCCGTAAACTTTGTTAATAGCCAATCAACAAATCACCAGAATAATCCAT
ATTCTAACACTTACAATCTGGGATGGAGGAATCACCCCAACTTCTCATGGAGGGATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGAGATGTTGTTGAATCTGCAGAATCAAAATGCTAAGGCAACAGTGAGAAGCATGGAGGCAACACCACTTGGTTCCGCTAATAATCAGGCGCAACCAACTTTGAT
GGAACCATGCGTTCTATGCGGCGATGGTCACGCATATGAAGATTGCCCTCATAGCGGTGCTTCCGTAAACTTTGTTAATAGCCAATCAACAAATCACCAGAATAATCCAT
ATTCTAACACTTACAATCTGGGATGGAGGAATCACCCCAACTTCTCATGGAGGGATCAATGA
Protein sequenceShow/hide protein sequence
MREMLLNLQNQNAKATVRSMEATPLGSANNQAQPTLMEPCVLCGDGHAYEDCPHSGASVNFVNSQSTNHQNNPYSNTYNLGWRNHPNFSWRDQ