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Sed0016013 (gene) of Chayote v1 genome

Gene IDSed0016013
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:35364392..35365086
RNA-Seq ExpressionSed0016013
SyntenySed0016013
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN26647.1 unknown [Zea mays]9.9e-0548.04Show/hide
Query:  RPSTIAPIRHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRL
        +P+  A  R  +R RR  R    R G G     R  G L +    G AR+AAD +VAE +   PV AAG AEVARL  +VVVVVAE GV G+A RA Q L
Subjt:  RPSTIAPIRHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRL

Query:  GL
         L
Subjt:  GL

BAS70841.1 Os01g0193250, partial [Oryza sativa Japonica Group]1.7e-0446.94Show/hide
Query:  RHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILG----------FARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRA
        + R+ +R   RH   R G   R  RR  G    G  L            A +AAD +VAE AA  PV AA  AEVARLR +VVVVVAE GV G+APRA
Subjt:  RHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILG----------FARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRA

PON82987.1 hypothetical protein TorRG33x02_211930 [Trema orientale]9.9e-0542.98Show/hide
Query:  RHRKRIRRSERHPD-------FRSGIGFRVERRHDGRLRSG--------RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIA
        R R R+ RS R           R+ + F + RR   R R          R L    + AD NVAEDAA GPV AA  AE+A LR +VVVVVAE GVE IA
Subjt:  RHRKRIRRSERHPD-------FRSGIGFRVERRHDGRLRSG--------RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIA

Query:  PRALQRLGLEVLQI
         R LQ L + ++ +
Subjt:  PRALQRLGLEVLQI

RWW04476.1 hypothetical protein GW17_00032294 [Ensete ventricosum]1.5e-0870.49Show/hide
Query:  GRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRAL
        G LRSG  LG A SAADRNVAEDAA GPV AAG AEVA L  +VVVVVAE GV G+   AL
Subjt:  GRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRAL

TrEMBL top hitse value%identityAlignment
A0A0E0H4I5 Uncharacterized protein1.3e-0548.91Show/hide
Query:  PDFRSGIGFRVERRHDGRLRSG------------RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRL
        P  R+G G    R  D  +R G            R L  AR+AAD +VAE AA  PVT A  AEVARL   VVVVVAE GV  +APRA++RL
Subjt:  PDFRSGIGFRVERRHDGRLRSG------------RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRL

A0A2P5EBR2 Uncharacterized protein4.8e-0542.98Show/hide
Query:  RHRKRIRRSERHPD-------FRSGIGFRVERRHDGRLRSG--------RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIA
        R R R+ RS R           R+ + F + RR   R R          R L    + AD NVAEDAA GPV AA  AE+A LR +VVVVVAE GVE IA
Subjt:  RHRKRIRRSERHPD-------FRSGIGFRVERRHDGRLRSG--------RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIA

Query:  PRALQRLGLEVLQI
         R LQ L + ++ +
Subjt:  PRALQRLGLEVLQI

A0A444E291 Uncharacterized protein7.1e-0970.49Show/hide
Query:  GRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRAL
        G LRSG  LG A SAADRNVAEDAA GPV AAG AEVA L  +VVVVVAE GV G+   AL
Subjt:  GRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRAL

C0HHZ4 Uncharacterized protein4.8e-0548.04Show/hide
Query:  RPSTIAPIRHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRL
        +P+  A  R  +R RR  R    R G G     R  G L +    G AR+AAD +VAE +   PV AAG AEVARL  +VVVVVAE GV G+A RA Q L
Subjt:  RPSTIAPIRHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRL

Query:  GL
         L
Subjt:  GL

K3YVC5 Uncharacterized protein2.2e-1064.86Show/hide
Query:  RRHDGRLRSG-----RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRLG
        RR  GR   G     R LG A +AAD +VAEDAA GPV AA  AEVARLR +VVVVVAE GV G+APRAL RLG
Subjt:  RRHDGRLRSG-----RILGFARSAADRNVAEDAAQGPVTAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGAAATGGAGCATTCAATCCGCAGAATTTCAGCCACGAATCTGCATCGACGCCACCGGAAATCTCAACCGTTCCTTCACTTTCGCCTCTCGCTCTTTTCTCCG
CCCTCCGATCGCCGCCGTCCACCGCCGCCCTTCCACAATCGCTCCAATCCGCCACCGCAAACGGATCCGACGATCCGAGCGACATCCCGATTTCAGATCTGGAATCGGAT
TCAGAGTTGAACGAAGGCACGATGGGAGGCTTAGATCTGGAAGGATTCTTGGATTTGCGAGATCCGCCGCCGACCGGAACGTTGCGGAGGACGCCGCCCAGGGTCCAGTA
ACGGCGGCAGGATTTGCAGAAGTGGCGAGGCTGAGAGTAATTGTAGTTGTTGTAGTAGCAGAATTTGGTGTCGAAGGAATCGCACCTAGGGCACTTCAACGCCTCGGATT
GGAGGTTCTGCAAATCCATTTTGGTTTCGAATTGCGGGATTTAGGGTTTATAATGGAGCTAGGGTTTGAGGTCGGCAGCCACGACGGAGGAGGGGAAATGCGGCGGAGGT
ACACGTGGAGGGACGGGAATGAGGACATGGCTTTGTCGGCCGTTTTGAAGAGTGACACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGAAATGGAGCATTCAATCCGCAGAATTTCAGCCACGAATCTGCATCGACGCCACCGGAAATCTCAACCGTTCCTTCACTTTCGCCTCTCGCTCTTTTCTCCG
CCCTCCGATCGCCGCCGTCCACCGCCGCCCTTCCACAATCGCTCCAATCCGCCACCGCAAACGGATCCGACGATCCGAGCGACATCCCGATTTCAGATCTGGAATCGGAT
TCAGAGTTGAACGAAGGCACGATGGGAGGCTTAGATCTGGAAGGATTCTTGGATTTGCGAGATCCGCCGCCGACCGGAACGTTGCGGAGGACGCCGCCCAGGGTCCAGTA
ACGGCGGCAGGATTTGCAGAAGTGGCGAGGCTGAGAGTAATTGTAGTTGTTGTAGTAGCAGAATTTGGTGTCGAAGGAATCGCACCTAGGGCACTTCAACGCCTCGGATT
GGAGGTTCTGCAAATCCATTTTGGTTTCGAATTGCGGGATTTAGGGTTTATAATGGAGCTAGGGTTTGAGGTCGGCAGCCACGACGGAGGAGGGGAAATGCGGCGGAGGT
ACACGTGGAGGGACGGGAATGAGGACATGGCTTTGTCGGCCGTTTTGAAGAGTGACACGTAA
Protein sequenceShow/hide protein sequence
MIVKWSIQSAEFQPRICIDATGNLNRSFTFASRSFLRPPIAAVHRRPSTIAPIRHRKRIRRSERHPDFRSGIGFRVERRHDGRLRSGRILGFARSAADRNVAEDAAQGPV
TAAGFAEVARLRVIVVVVVAEFGVEGIAPRALQRLGLEVLQIHFGFELRDLGFIMELGFEVGSHDGGGEMRRRYTWRDGNEDMALSAVLKSDT