; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016023 (gene) of Chayote v1 genome

Gene IDSed0016023
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG13:19554884..19563508
RNA-Seq ExpressionSed0016023
SyntenySed0016023
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158131.1 pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia]1.9e-12286.67Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MAIR FSRSK    +S  LR LT +PI DIP PVKS I GFQP+SSRP CGFR +HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++SHV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLK+DMI+VLGELERQEEVAL VKIFRLI KQ+WYKPDVFMYKDLI+ALA SKKMDDAMELWE+MRKE+LFPDSQTYTEVIRGFLRYGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEE+FPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_022964699.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]6.1e-12185.88Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MA+R FS+ K     S  LR L  +PI DIP PVKS +AGFQP+SSRP  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++ HV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLK+DMIAVLGELERQEEVAL VK+FRLI KQEWYKPDVF+YKDLIVALARSK+MDDAMELWE+MRKENLFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_023519300.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]3.6e-12185.88Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MA+R FS+SK     S  LR LT++PI DI  PVKS +AGFQP+SS+P  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++ HV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLK+DMIAVLGELERQEEVAL VK+FRLI KQEWYKPDVF+YKDLIVALARSK+MDDAMELWE+MRKENLFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_023521051.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita pepo subsp. pepo]1.0e-12085.49Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MA+R FS+SK     S  LR LT++PI DI  PVKS +AGFQP+SS+P  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++ HV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLK+DMIAVLGELERQEEVAL VK+FRLI KQEWYKPDVF+YKDLIVALARSK+MD+AMELWE+MRKENLFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_038895593.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida]1.8e-12085.49Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MAIR FSRSK    +S  LR LT +PI D   PVKS I GFQP+SSRP  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKL+KF++SHV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLK+DMI+VLGELERQEEVAL VKIFRLI KQ+WYKPDVF+YKDLI+ALARSKKMDDAM+LWE+MR+ENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

TrEMBL top hitse value%identityAlignment
A0A0A0LVE9 Uncharacterized protein2.8e-11983.14Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MAIR FSRSK    +S  L+ LT +PI D+P PVKS I  FQP+S RP  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEK +KF++SHV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLK+DM+AVLGELERQEEVAL VKIFRLI KQ+WYKPDV++YKDLI+ALARSKKMDDAM+LWE+MR+ENLFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A5A7SRJ7 Pentatricopeptide repeat-containing protein3.6e-11983.53Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MAIR FSRSK    +   LR LT +PI D+P PV S I GFQP+SSRP  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKL KF++SHV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLK+DM+AVLGELERQEEVAL VKIFRLI KQ+WYKPDV++YKDLI+ALARSKKMDDAM+LWE+MR+ENLFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A6J1E045 pentatricopeptide repeat-containing protein At3g468709.2e-12386.67Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MAIR FSRSK    +S  LR LT +PI DIP PVKS I GFQP+SSRP CGFR +HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++SHV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLK+DMI+VLGELERQEEVAL VKIFRLI KQ+WYKPDVFMYKDLI+ALA SKKMDDAMELWE+MRKE+LFPDSQTYTEVIRGFLRYGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEE+FPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A6J1HLK1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic3.0e-12185.88Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MA+R FS+ K     S  LR L  +PI DIP PVKS +AGFQP+SSRP  GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++ HV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLK+DMIAVLGELERQEEVAL VK+FRLI KQEWYKPDVF+YKDLIVALARSK+MDDAMELWE+MRKENLFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A6J1I496 protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.9e-12085.88Show/hide
Query:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV
        MA+R FS+SK     S  LR LT +PI DIP PVKS IAGF P+SSR   GFRL+HDGRPRGPLWRSRK+IGKEALFVIQGLKRFKEDEEKLQKF++ HV
Subjt:  MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHV

Query:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLK+DMIAVLGELERQEEVAL VK+FRLI KQEW+KPDVF+YKDLIVALARSKKMDDAMELWE+MRKENLFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.4e-4646.41Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLQKFIRSHVSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKE
        + KE L   + LKR +    +L +FI SHVSRLLK D+++VL E +RQ +V L +K++ ++ ++ WY+PD+F Y+D+++ LAR+KK+D+  ++WE ++KE
Subjt:  IGKEALFVIQGLKRFKEDEEKLQKFIRSHVSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKE

Query:  NLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF E+FP   VYDPPE+I
Subjt:  NLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI

Q76C99 Protein Rf1, mitochondrial8.6e-0933.75Show/hide
Query:  PDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILL
        PDV  Y  +I AL +++ MD AME+  TM K  + PD  TY  ++ G+   G P +A+   + M+     PD + + +L+
Subjt:  PDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILL

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.9e-0834.34Show/hide
Query:  VKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
        +++F L+ +Q WYKP+V +Y  LIV L + K+ + A EL++ M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  VKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial3.9e-0934.31Show/hide
Query:  EVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V  G+++F   +K +   P VF+Y  LI  L + K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  + E MK     P  + F  LLK
Subjt:  EVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic5.1e-9468.9Show/hide
Query:  AIRVFSRSKFLNLSSQLLRALTSKP-ISDIPSPVKSPIAGFQPESSRP-TCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSH
        AIRV SR KF   +S   + +T  P I  I      P     P   +P T     FHDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KFI++H
Subjt:  AIRVFSRSKFLNLSSQLLRALTSKP-ISDIPSPVKSPIAGFQPESSRP-TCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSH

Query:  VSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIY
        V RLLK+DM+AV+GELERQEE AL +K+F +I KQEWY+PDVFMYKDLIV+LA+SK+MD+AM LWE M+KENLFPDSQTYTEVIRGFLR G P+DAMN+Y
Subjt:  VSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIY

Query:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG
        EDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFEE+FP++H YDPPEEIFG
Subjt:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein9.7e-4846.41Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLQKFIRSHVSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKE
        + KE L   + LKR +    +L +FI SHVSRLLK D+++VL E +RQ +V L +K++ ++ ++ WY+PD+F Y+D+++ LAR+KK+D+  ++WE ++KE
Subjt:  IGKEALFVIQGLKRFKEDEEKLQKFIRSHVSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKE

Query:  NLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF E+FP   VYDPPE+I
Subjt:  NLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein3.6e-9568.9Show/hide
Query:  AIRVFSRSKFLNLSSQLLRALTSKP-ISDIPSPVKSPIAGFQPESSRP-TCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSH
        AIRV SR KF   +S   + +T  P I  I      P     P   +P T     FHDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KFI++H
Subjt:  AIRVFSRSKFLNLSSQLLRALTSKP-ISDIPSPVKSPIAGFQPESSRP-TCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSH

Query:  VSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIY
        V RLLK+DM+AV+GELERQEE AL +K+F +I KQEWY+PDVFMYKDLIV+LA+SK+MD+AM LWE M+KENLFPDSQTYTEVIRGFLR G P+DAMN+Y
Subjt:  VSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIY

Query:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG
        EDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFEE+FP++H YDPPEEIFG
Subjt:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain3.3e-1633.33Show/hide
Query:  RGPLWRSRKSIGKEALFVIQGLKR---------------FKEDEEKLQKFIRSHVSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYK
        R PL R R  +  EA+  +Q LKR                      L + I S   RLLK DM+AVL EL RQ E +L +K+F  I K+ WYKP V MY 
Subjt:  RGPLWRSRKSIGKEALFVIQGLKR---------------FKEDEEKLQKFIRSHVSRLLKMDMIAVLGELERQEEVALGVKIFRLILKQEWYKPDVFMYK

Query:  DLIVALARSKKMDDAMELWETMRKE-NLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL
        D+I  +A +  M++   L+  M+ E  L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL
Subjt:  DLIVALARSKKMDDAMELWETMRKE-NLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL

AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein2.7e-1034.31Show/hide
Query:  EVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V  G+++F   +K +   P VF+Y  LI  L + K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  + E MK     P  + F  LLK
Subjt:  EVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-0934.34Show/hide
Query:  VKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
        +++F L+ +Q WYKP+V +Y  LIV L + K+ + A EL++ M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  VKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTCGGGTATTTTCGAGGTCGAAATTCCTCAATCTTTCTTCCCAACTCCTCCGAGCCCTAACGAGTAAACCCATTAGCGATATCCCATCACCAGTGAAATCGCC
GATCGCCGGATTTCAGCCGGAGTCGAGCCGACCCACATGCGGATTCCGGCTATTTCACGACGGCCGGCCACGTGGGCCCCTCTGGAGAAGCCGGAAATCAATTGGGAAAG
AAGCCCTTTTCGTTATTCAGGGATTGAAGCGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATTAGGAGCCATGTTTCCAGGCTCTTGAAAATGGACATGATTGCT
GTTCTTGGTGAGCTTGAGCGCCAGGAAGAGGTTGCTTTGGGCGTCAAGATATTCAGGTTGATTCTGAAACAAGAATGGTACAAGCCTGATGTCTTTATGTACAAAGACTT
GATTGTTGCATTAGCTAGAAGTAAAAAGATGGATGATGCAATGGAGTTATGGGAAACCATGAGAAAGGAGAACTTATTCCCCGACTCACAAACGTATACCGAAGTCATCA
GAGGTTTCTTGAGATACGGATCTCCTTCTGATGCAATGAACATCTATGAGGATATGAAGAAATCTCCAGATCCCCCAGATGAGTTGCCATTTAGGATTTTGTTGAAAGGA
CTTCTCCCACACCCCCTTTTGAGAAACAGAGTTAAGCAAGATTTTGAGGAGATCTTTCCTGATCAGCATGTTTACGATCCCCCCGAAGAGATATTCGGCCTACGTTGA
mRNA sequenceShow/hide mRNA sequence
AAATGATTTAAATCTTCATTTCTAATTTCTCACTTAGTTTAGTAGAGTCCTAAACCCTCAACCAAAAACCCTCTCTGCCCTTTCTCTTCCATCAGTGAACTCGAACCGCA
GTACTCCAATGGCAATTCGGGTATTTTCGAGGTCGAAATTCCTCAATCTTTCTTCCCAACTCCTCCGAGCCCTAACGAGTAAACCCATTAGCGATATCCCATCACCAGTG
AAATCGCCGATCGCCGGATTTCAGCCGGAGTCGAGCCGACCCACATGCGGATTCCGGCTATTTCACGACGGCCGGCCACGTGGGCCCCTCTGGAGAAGCCGGAAATCAAT
TGGGAAAGAAGCCCTTTTCGTTATTCAGGGATTGAAGCGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATTAGGAGCCATGTTTCCAGGCTCTTGAAAATGGACA
TGATTGCTGTTCTTGGTGAGCTTGAGCGCCAGGAAGAGGTTGCTTTGGGCGTCAAGATATTCAGGTTGATTCTGAAACAAGAATGGTACAAGCCTGATGTCTTTATGTAC
AAAGACTTGATTGTTGCATTAGCTAGAAGTAAAAAGATGGATGATGCAATGGAGTTATGGGAAACCATGAGAAAGGAGAACTTATTCCCCGACTCACAAACGTATACCGA
AGTCATCAGAGGTTTCTTGAGATACGGATCTCCTTCTGATGCAATGAACATCTATGAGGATATGAAGAAATCTCCAGATCCCCCAGATGAGTTGCCATTTAGGATTTTGT
TGAAAGGACTTCTCCCACACCCCCTTTTGAGAAACAGAGTTAAGCAAGATTTTGAGGAGATCTTTCCTGATCAGCATGTTTACGATCCCCCCGAAGAGATATTCGGCCTA
CGTTGAGGTCGGTTTTATGCATCTATTTTTCTCCTCTTTCTTCTCAATTAACATTGGTTATGGTTGTTAGTATGTAGTAGACAATCAAAGTAGGCCTAAGCCATTGTATG
GTTATAAACTCAAGCCTCTTCAGCTACTTGTGTCATTATATGTCAAATGTTAAAACACCAAATGACCAAAACATGCTTTTAAAAGACATAGAACCTTCATGGTTGGTTGA
GTTCAAGCATAGTAATCACCTACTTAAGATTTAATATCTTATGAGTTACATTATCGATCAAATGTAGTAAAGTGACCATTGTTTCATAAGAATAGTTAAGTTGCATAGCC
Protein sequenceShow/hide protein sequence
MAIRVFSRSKFLNLSSQLLRALTSKPISDIPSPVKSPIAGFQPESSRPTCGFRLFHDGRPRGPLWRSRKSIGKEALFVIQGLKRFKEDEEKLQKFIRSHVSRLLKMDMIA
VLGELERQEEVALGVKIFRLILKQEWYKPDVFMYKDLIVALARSKKMDDAMELWETMRKENLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKG
LLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR