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Sed0016032 (gene) of Chayote v1 genome

Gene IDSed0016032
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG07:5792260..5793058
RNA-Seq ExpressionSed0016032
SyntenySed0016032
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]4.9e-2151.72Show/hide
Query:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVEV-DEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY
        +SL    KLAL    F +F+PP        ++G S G+ +   +++ + +K+VIGSRPP C NKC +CRPC AAAVVP   MK      F  SR EEDSY
Subjt:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVEV-DEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY

Query:  YLLSWKCRCGNKIYQP
        YLLSWKC+CGNKIYQP
Subjt:  YLLSWKCRCGNKIYQP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]9.8e-2256.03Show/hide
Query:  MSLPCFFKLALFFLFFITFVPPKA---GISR-GEREISYVEVD-----EKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY
        +SL    KLAL    F +F+PP +    +SR G  E+   E D     E+K+VIGSRPP C+NKC +CRPC AAAVVP   MK      F  SR EEDSY
Subjt:  MSLPCFFKLALFFLFFITFVPPKA---GISR-GEREISYVEVD-----EKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY

Query:  YLLSWKCRCGNKIYQP
        YLLSWKCRCGNKIYQP
Subjt:  YLLSWKCRCGNKIYQP

KAG6593393.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2758.06Show/hide
Query:  MSLPCFFKLAL---FFLFFITFVPPKAG---------------ISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFV-----F
        MSLP  FKL L   FF FF+TF+P K+G               + +GERE SYV  ++KK+VIGSRPP CENKC+SCRPC AAAVVP    K+       
Subjt:  MSLPCFFKLAL---FFLFFITFVPPKAG---------------ISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFV-----F

Query:  SRVEEDSYYLLSWKCRCGNKIYQP
        S VE+DSYYLLSWKCRCGNKIYQP
Subjt:  SRVEEDSYYLLSWKCRCGNKIYQP

KAG7025740.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2657.14Show/hide
Query:  MSLPCFFKLAL-----FFLFFITFVPPKAG---------------ISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFV----
        MSLP  FKL L     FF FF+TF+P K+G               + +GERE SYV  ++KK+VIGSRPP CENKC+SCRPC AAAVVP    K+     
Subjt:  MSLPCFFKLAL-----FFLFFITFVPPKAG---------------ISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFV----

Query:  -FSRVEEDSYYLLSWKCRCGNKIYQP
          S VE+DSYYLLSWKCRCGNKIYQP
Subjt:  -FSRVEEDSYYLLSWKCRCGNKIYQP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]2.9e-2151.72Show/hide
Query:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVE-VDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY
        +SL    KLAL    F +F+PP        ++G S G+ +   ++ ++++K+VIGSRPP C+NKC +CRPC AAAVVP   MK      F  SR EEDSY
Subjt:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVE-VDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY

Query:  YLLSWKCRCGNKIYQP
        YLLSWKC+CGNKIYQP
Subjt:  YLLSWKCRCGNKIYQP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein4.8e-2256.03Show/hide
Query:  MSLPCFFKLALFFLFFITFVPPKA---GISR-GEREISYVEVD-----EKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY
        +SL    KLAL    F +F+PP +    +SR G  E+   E D     E+K+VIGSRPP C+NKC +CRPC AAAVVP   MK      F  SR EEDSY
Subjt:  MSLPCFFKLALFFLFFITFVPPKA---GISR-GEREISYVEVD-----EKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY

Query:  YLLSWKCRCGNKIYQP
        YLLSWKCRCGNKIYQP
Subjt:  YLLSWKCRCGNKIYQP

A0A1S3CDZ4 Epidermal patterning factor-like protein1.4e-2151.72Show/hide
Query:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVE-VDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY
        +SL    KLAL    F +F+PP        ++G S G+ +   ++ ++++K+VIGSRPP C+NKC +CRPC AAAVVP   MK      F  SR EEDSY
Subjt:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVE-VDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY

Query:  YLLSWKCRCGNKIYQP
        YLLSWKC+CGNKIYQP
Subjt:  YLLSWKCRCGNKIYQP

A0A3Q7Y983 Epidermal patterning factor-like protein1.3e-1952.38Show/hide
Query:  PCFFKLAL--FFLFFITFVPPKAG--ISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVV---PEPGMKFVFSRVEEDSYYLLSWKCRCGN
        P  FK+A+   F+F +  + PK+G  +   ER  S   ++EKK+VIGS+PP C NKC +CRPC A  VV   P+ G+K V+S  E DSYYLLSWKCRCGN
Subjt:  PCFFKLAL--FFLFFITFVPPKAG--ISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVV---PEPGMKFVFSRVEEDSYYLLSWKCRCGN

Query:  KIYQP
        K++QP
Subjt:  KIYQP

A0A5D3CGR2 Epidermal patterning factor-like protein2.4e-2151.72Show/hide
Query:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVEV-DEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY
        +SL    KLAL    F +F+PP        ++G S G+ +   +++ + +K+VIGSRPP C NKC +CRPC AAAVVP   MK      F  SR EEDSY
Subjt:  MSLPCFFKLALFFLFFITFVPP--------KAGISRGEREISYVEV-DEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMK------FVFSRVEEDSY

Query:  YLLSWKCRCGNKIYQP
        YLLSWKC+CGNKIYQP
Subjt:  YLLSWKCRCGNKIYQP

K7L7X4 Epidermal patterning factor-like protein1.1e-1851.02Show/hide
Query:  LALFFLFFITFVPPKAGISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVP-----EPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        + + F+FF++F+P K+G S    E +   ++E K+VIGS+PP C NKC+SCRPC A  VVP     + G K V SR ++D+YYLLSWKC+CGNK++QP
Subjt:  LALFFLFFITFVPPKAGISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVP-----EPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 62.4e-0740.35Show/hide
Query:  IGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC    V   PG            YY  +W+C+CGNK+Y P
Subjt:  IGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 41.4e-0739.29Show/hide
Query:  GSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        GS PP C +KC  C+PC    V  +PG+           YY  +W+C+CGNK++ P
Subjt:  GSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

Q7M1E7 Polygalacturonase4.2e-0734.92Show/hide
Query:  DEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        D   + + S PP C+NKC+ C+PC    ++  P         +   YY   W C C NKIY P
Subjt:  DEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

Q9FY19 Polygalacturonase3.2e-0736.92Show/hide
Query:  VDEKK-VVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        +DEK    + S PP C+NKC+ C+PC    ++  P         + + YY   W C C NKIY P
Subjt:  VDEKK-VVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 59.9e-0934.65Show/hide
Query:  FFLFF-----ITFVPPKAGISRGEREISYVE-----VDEKKV-VIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQ
        F LFF      +   P  G+ +G++EI+        VD+K++   GS PP C  KC  C PC A  V  +PG+      +    YY  +W+C+CGNK++ 
Subjt:  FFLFF-----ITFVPPKAGISRGEREISYVE-----VDEKKV-VIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQ

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.7e-0840.35Show/hide
Query:  IGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC    V   PG            YY  +W+C+CGNK+Y P
Subjt:  IGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

AT2G30370.2 allergen-related1.7e-0840.35Show/hide
Query:  IGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC    V   PG            YY  +W+C+CGNK+Y P
Subjt:  IGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

AT3G22820.1 allergen-related7.1e-1034.65Show/hide
Query:  FFLFF-----ITFVPPKAGISRGEREISYVE-----VDEKKV-VIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQ
        F LFF      +   P  G+ +G++EI+        VD+K++   GS PP C  KC  C PC A  V  +PG+      +    YY  +W+C+CGNK++ 
Subjt:  FFLFF-----ITFVPPKAGISRGEREISYVE-----VDEKKV-VIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQ

Query:  P
        P
Subjt:  P

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.0e-0839.29Show/hide
Query:  GSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP
        GS PP C +KC  C+PC    V  +PG+           YY  +W+C+CGNK++ P
Subjt:  GSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP

AT4G37810.1 unknown protein6.6e-0837.66Show/hide
Query:  VIGSRPPECEN-KCRSCRPCTAAAVVPEPGMK-----------------FVFSRVEEDSYYL-LSWKCRCGNKIYQP
        +IGSRPP CE  +CRSC  C A  V   P  K                   ++R ++ + Y  +SWKC+CGN IY P
Subjt:  VIGSRPPECEN-KCRSCRPCTAAAVVPEPGMK-----------------FVFSRVEEDSYYL-LSWKCRCGNKIYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTCCTTGTTTCTTCAAGTTGGCTCTTTTCTTCTTGTTTTTCATCACATTTGTTCCTCCTAAAGCAGGTATCAGCAGAGGTGAAAGAGAAATTAGTTATGTAGA
GGTGGATGAAAAGAAAGTGGTGATTGGTTCGCGGCCGCCGGAGTGCGAGAACAAGTGCCGGAGTTGCAGGCCGTGCACGGCGGCGGCGGTGGTGCCGGAGCCCGGGATGA
AGTTTGTTTTCTCTCGAGTGGAAGAAGATAGCTATTATCTTCTCTCCTGGAAATGTCGATGTGGGAATAAGATTTATCAGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTCCTTGTTTCTTCAAGTTGGCTCTTTTCTTCTTGTTTTTCATCACATTTGTTCCTCCTAAAGCAGGTATCAGCAGAGGTGAAAGAGAAATTAGTTATGTAGA
GGTGGATGAAAAGAAAGTGGTGATTGGTTCGCGGCCGCCGGAGTGCGAGAACAAGTGCCGGAGTTGCAGGCCGTGCACGGCGGCGGCGGTGGTGCCGGAGCCCGGGATGA
AGTTTGTTTTCTCTCGAGTGGAAGAAGATAGCTATTATCTTCTCTCCTGGAAATGTCGATGTGGGAATAAGATTTATCAGCCGTAG
Protein sequenceShow/hide protein sequence
MSLPCFFKLALFFLFFITFVPPKAGISRGEREISYVEVDEKKVVIGSRPPECENKCRSCRPCTAAAVVPEPGMKFVFSRVEEDSYYLLSWKCRCGNKIYQP