; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016045 (gene) of Chayote v1 genome

Gene IDSed0016045
OrganismSechium edule (Chayote v1)
Descriptionprotein POOR HOMOLOGOUS SYNAPSIS 1
Genome locationLG03:42856995..42860138
RNA-Seq ExpressionSed0016045
SyntenySed0016045
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585176.1 Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. sororia]5.9e-12375.85Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG---------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDL
        MAG E   QSKEE EMPFAAI DQWEVQFSRFVCYPS T+T            NLRP  LNARNRPPRGTWISSSS A L LL HCSASD ILAVR RD 
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG---------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDL

Query:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDK-------------IQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHS
        ILEEHYLSKLHFSWPQ+ CISGFPARGTRTIFGSYRDS D+             IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPIS DFGSQ+S+  
Subjt:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDK-------------IQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHS

Query:  ELLSSNRLTDSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMED
           ++NR +DSLSEELSNSTVLQ YTPEMP SL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQGP    PSAT+D DLKSQIMKCMED
Subjt:  ELLSSNRLTDSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMED

Query:  SSFQDMLNRVEKIVDEIGGDLAL
        SSFQDMLNRVEKIV EIGGDLAL
Subjt:  SSFQDMLNRVEKIVDEIGGDLAL
KAG7020096.1 Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-12377.04Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG---------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDL
        MAG E   QSKEE EMPFAAI DQWEVQFSRFVCYPS T+T            NLRP  LNARNRPPRGTWISSSS A L LL HCSASD ILAVR RD 
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG---------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDL

Query:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVD--------KIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSS
        ILEEHYLSKLHFSWPQ+ CISGFPARGTRTIFGSYRDS D        +IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPIS DFGSQ+S+     ++
Subjt:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVD--------KIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSS

Query:  NRLTDSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQD
        NR +DSLSEELSNSTVLQ YTPEMP SL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQGP    PSAT+D DLKSQIMKCMEDSSFQD
Subjt:  NRLTDSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQD

Query:  MLNRVEKIVDEIGGDLAL
        MLNRVEKIV EIGGDLAL
Subjt:  MLNRVEKIVDEIGGDLAL
XP_022951934.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita moschata]7.5e-12678.03Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-------------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVR
        MAG E   QSKEE EMPFAAI DQWEVQFSRFVCYPS T+T                NLRP  LNAR+RPPRGTWISSSS A L LL HCSASD ILAVR
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-------------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVR

Query:  LRDLILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLT
         RD ILEEHYLSKLHFSWPQ+ CISGFP RGTRTIFGSYRDS D+IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPISCDFGSQ+S+     ++NR +
Subjt:  LRDLILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLT

Query:  DSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNR
        DSLSEELSNSTVLQ YTPEMPLSL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQGP    PSAT+D DLKSQIMKCMEDSSFQDMLNR
Subjt:  DSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNR

Query:  VEKIVDEIGGDLAL
        VEKIV EIGGDLAL
Subjt:  VEKIVDEIGGDLAL
XP_023002655.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita maxima]7.5e-12679.8Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-----AANLRPHRLNARN-RPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLILE
        MAG E   QSKEEAEMPFAAI DQWEVQFSRFVCYP+ T+T        NLRP  LNAR+ RPPRGTWISSSS A L LL HCSASDFILAVR RD ILE
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-----AANLRPHRLNARN-RPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLILE

Query:  EHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEEL
        EHYLSKLHFSWPQ+ CISGFPARGTRT+FGSYRDS D+IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPISCDFGSQ+S+     ++NR +DSLSEEL
Subjt:  EHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEEL

Query:  SNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDE
        SNSTVLQ YTPEMPLSL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQG     PSAT+D DLKSQIMKCMEDSSFQDMLNRVEKIV E
Subjt:  SNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDE

Query:  IGGDLAL
        IGGDLAL
Subjt:  IGGDLAL
XP_023538055.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo]4.7e-12880.19Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLIL
        MAG E   QSKE+AEMPFAAI DQWEVQFSRFVCYPS T+T          NLRP  LNARNRPPRGTWISSSS A L LL HCSASD ILAVR RD IL
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLIL

Query:  EEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEE
        EEHYLSKLHFSWPQ+ CISGFPARGTRTIFGSYRDS D+IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPISCDFGSQ+S+     ++NR +DSLSEE
Subjt:  EEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEE

Query:  LSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVD
        LSNSTVLQ YTPEMPLSL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQGP    PSAT+D DLKSQIMKCMEDSSFQDMLNRVEKIV 
Subjt:  LSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVD

Query:  EIGGDLAL
        EIGGDLAL
Subjt:  EIGGDLAL
TrEMBL top hitse value%identityAlignment
A0A6J1BQX6 protein POOR HOMOLOGOUS SYNAPSIS 16.6e-12075.91Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPS--ITATGAANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLILEEHYL
        MAG +  V+S+EEAEMP AAI DQWEVQFSRF+CYPS   T T  A+L P     RNRPPRGTWISSSS A L LL  CS+ D IL VR RD ILEEHYL
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPS--ITATGAANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLILEEHYL

Query:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNST
        SKLHFSWPQVSCISGFPARGTRTIFGSYRDS ++IQKFALRFST+YE +SFVNILKEM++DA DIQPIS +FGS+++T SELLSSNR +DSL EELSNS 
Subjt:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNST

Query:  VLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGD
        ++Q YTPEMPLSL DT ETY CSQE  HLDH ES+FAALPPSFTSMLSNCS VKQG     PS T+D DLKSQIMKCMEDSSFQDMLNRVEKIV+EIGGD
Subjt:  VLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGD

Query:  LAL
        L L
Subjt:  LAL
A0A6J1GK72 protein POOR HOMOLOGOUS SYNAPSIS 13.6e-12678.03Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-------------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVR
        MAG E   QSKEE EMPFAAI DQWEVQFSRFVCYPS T+T                NLRP  LNAR+RPPRGTWISSSS A L LL HCSASD ILAVR
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-------------AANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSASDFILAVR

Query:  LRDLILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLT
         RD ILEEHYLSKLHFSWPQ+ CISGFP RGTRTIFGSYRDS D+IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPISCDFGSQ+S+     ++NR +
Subjt:  LRDLILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLT

Query:  DSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNR
        DSLSEELSNSTVLQ YTPEMPLSL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQGP    PSAT+D DLKSQIMKCMEDSSFQDMLNR
Subjt:  DSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNR

Query:  VEKIVDEIGGDLAL
        VEKIV EIGGDLAL
Subjt:  VEKIVDEIGGDLAL
A0A6J1KPK1 protein POOR HOMOLOGOUS SYNAPSIS 13.6e-12679.8Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-----AANLRPHRLNARN-RPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLILE
        MAG E   QSKEEAEMPFAAI DQWEVQFSRFVCYP+ T+T        NLRP  LNAR+ RPPRGTWISSSS A L LL HCSASDFILAVR RD ILE
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATG-----AANLRPHRLNARN-RPPRGTWISSSS-ASLHLLRHCSASDFILAVRLRDLILE

Query:  EHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEEL
        EHYLSKLHFSWPQ+ CISGFPARGTRT+FGSYRDS D+IQKFALRFSTS EI+SFV+ILKEMSKDA DIQPISCDFGSQ+S+     ++NR +DSLSEEL
Subjt:  EHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEEL

Query:  SNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDE
        SNSTVLQ YTPEMPLSL DTAE YS SQENVH+DH ESIFAALPPSFTSM+SNCS VKQG     PSAT+D DLKSQIMKCMEDSSFQDMLNRVEKIV E
Subjt:  SNSTVLQHYTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDE

Query:  IGGDLAL
        IGGDLAL
Subjt:  IGGDLAL
A0A6P4AGF4 protein POOR HOMOLOGOUS SYNAPSIS 1 isoform X11.6e-7051Show/hide
Query:  LEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSAS-DFILAVRLRDLILEEHYLSKLH
        L  A +   E ++      ++WEV+FSRF  YP +T+T   +L P     RNR P GTWISSSS   L LL H S S D +L V  RD ILEEHY+SKLH
Subjt:  LEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSAS-DFILAVRLRDLILEEHYLSKLH

Query:  FSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNSTVLQH
        FSWPQVSC+SGFPARGTR +F SYRD V ++QKFALRFST YE E FV+ LKE+ K   D   ++C FGS++S+ SE +SSN      +E+ + +   + 
Subjt:  FSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNSTVLQH

Query:  YTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSG-VKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGDLAL
        YTPE P S  + AE YSC+++ V   +F+ +F+ALPPSFTS++ NCS  V+Q  A+   S  ++ ++KSQI++ MEDS+FQDML +VEK++ E+GGDL L
Subjt:  YTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSG-VKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGDLAL
A0A6P6GJL3 protein POOR HOMOLOGOUS SYNAPSIS 1 isoform X22.2e-7050.5Show/hide
Query:  LEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSAS-DFILAVRLRDLILEEHYLSKLH
        L  A +   E ++      ++WEV+FSRF  YP +T+T   +L P     RNR P GTWISSSS   L LL H S S D +L V  RD ILEEHY+SKLH
Subjt:  LEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSS-ASLHLLRHCSAS-DFILAVRLRDLILEEHYLSKLH

Query:  FSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNSTVLQH
        FSWPQVSC+SGFPARGTR +F SYRD V ++QKFALRFST YE E FV+ LKE+ K   D   ++C FGS++S+ SE +SSN      +E+ + +   + 
Subjt:  FSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNSTVLQH

Query:  YTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGDLAL
        YTPE P S  + AE YSC+++ V   +F+ +F+ALPPSFTS++ NCS   +  A+   S  ++ ++KSQI++ MEDS+FQDML +VEK++ E+GGDL L
Subjt:  YTPEMPLSLTDTAETYSCSQENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGDLAL
SwissProt top hitse value%identityAlignment
Q45GQ7 Protein POOR HOMOLOGOUS SYNAPSIS 12.9e-4035.59Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSA--SLHLLRHCSASDFILAVRLRDLILEEHYLS
        MAG   A   +  AE   ++   +W + F+RFV YPS  +     L+P     +   P GTW+S+SS+  SLH++   + SD IL+V+L   +LEEHY+S
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSA--SLHLLRHCSASDFILAVRLRDLILEEHYLS

Query:  KLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDI------QPISCDFGSQLSTHSELLSSNRLTDSLSEE
        KL+F+WPQ+SC+SGFP+RG+R IF +Y DS ++IQKFALRFST      FV  LKE  K   +           CD    +S  S+   S+ +    +++
Subjt:  KLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDI------QPISCDFGSQLSTHSELLSSNRLTDSLSEE

Query:  LSNST-VLQHYTPEMPLSLTDTAE---TYSCSQENVHLDHFESI---------------------------------------------FAALPPSFTSM
          N    L  Y PEM   +   A+   + + S+ +   D+  SI                                               +LPPSFT++
Subjt:  LSNST-VLQHYTPEMPLSLTDTAE---TYSCSQENVHLDHFESI---------------------------------------------FAALPPSFTSM

Query:  LSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGD
        LS C       A  T +  ++ DLKSQI+K MEDSSFQDML +VE+I+DEIGG+
Subjt:  LSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGD
Q6W2J0 Protein POOR HOMOLOGOUS SYNAPSIS 17.0e-2629.19Show/hide
Query:  QWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSASLHLLRHCSASDF--ILAVRLRDLILEEHYLSKLHFSWPQVSCISGFPARGTRTI
        +WEV+++R+   P    T A       +       +GTWI +S  +   + H S      +L + + D++ EEH++S L+FSWPQV+C++  P RG+R +
Subjt:  QWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSASLHLLRHCSASDF--ILAVRLRDLILEEHYLSKLHFSWPQVSCISGFPARGTRTI

Query:  FGSYRDSVDKIQKFALRFSTSYEIESFVNILKEM--SKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELS-NSTVLQHYTPEMPLSL---TDTAE
        F S+ D   +IQKFA+RF    + ESF++ ++    S    DI P   D+  + S+ SE + SN L   L +  +       H   E P++    TD   
Subjt:  FGSYRDSVDKIQKFALRFSTSYEIESFVNILKEM--SKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELS-NSTVLQHYTPEMPLSL---TDTAE

Query:  TYSCSQENVHLDHFESIFAALPPSFTSMLSNCS-------------------------------------GVKQGPAEMTPSATRDGDLKSQIMKCMEDS
            S  N       S  +A PPSF  ML +CS                                     G     AE   ++    DL ++I   M D 
Subjt:  TYSCSQENVHLDHFESIFAALPPSFTSMLSNCS-------------------------------------GVKQGPAEMTPSATRDGDLKSQIMKCMEDS

Query:  SFQDMLNRVEKIVDEIGGDLAL
        SF DML +++K +DE+GGD++L
Subjt:  SFQDMLNRVEKIVDEIGGDLAL
Arabidopsis top hitse value%identityAlignment
AT1G10710.1 poor homologous synapsis 11.3e-4035.51Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSA--SLHLLRHCSASDFILAVRLRDLILEEHYLS
        MAG   A   +  AE   ++   +W + F+RFV YPS  +     L+P     +   P GTW+S+SS+  SLH++   + SD IL+V+L   +LEEHY+S
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSA--SLHLLRHCSASDFILAVRLRDLILEEHYLS

Query:  KLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDI------QPISCDFGSQLSTHSELLSSNRLTDSLSEE
        KL+F+WPQ+SC+SGFP+RG+R IF +Y DS ++IQKFALRFST      FV  LKE  K   +           CD    +S  S+   S+ +    +++
Subjt:  KLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDI------QPISCDFGSQLSTHSELLSSNRLTDSLSEE

Query:  LSNST-VLQHYTPEMPLSLTDTAE---TYSCSQENVHLDHFESI---------------------------------------------FAALPPSFTSM
          N    L  Y PEM   +   A+   + + S+ +   D+  SI                                               +LPPSFT++
Subjt:  LSNST-VLQHYTPEMPLSLTDTAE---TYSCSQENVHLDHFESI---------------------------------------------FAALPPSFTSM

Query:  LSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIG
        LS C       A  T +  ++ DLKSQI+K MEDSSFQDML +VE+I+DEIG
Subjt:  LSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIG
AT1G10710.2 poor homologous synapsis 12.1e-4135.59Show/hide
Query:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSA--SLHLLRHCSASDFILAVRLRDLILEEHYLS
        MAG   A   +  AE   ++   +W + F+RFV YPS  +     L+P     +   P GTW+S+SS+  SLH++   + SD IL+V+L   +LEEHY+S
Subjt:  MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSA--SLHLLRHCSASDFILAVRLRDLILEEHYLS

Query:  KLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDI------QPISCDFGSQLSTHSELLSSNRLTDSLSEE
        KL+F+WPQ+SC+SGFP+RG+R IF +Y DS ++IQKFALRFST      FV  LKE  K   +           CD    +S  S+   S+ +    +++
Subjt:  KLHFSWPQVSCISGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDI------QPISCDFGSQLSTHSELLSSNRLTDSLSEE

Query:  LSNST-VLQHYTPEMPLSLTDTAE---TYSCSQENVHLDHFESI---------------------------------------------FAALPPSFTSM
          N    L  Y PEM   +   A+   + + S+ +   D+  SI                                               +LPPSFT++
Subjt:  LSNST-VLQHYTPEMPLSLTDTAE---TYSCSQENVHLDHFESI---------------------------------------------FAALPPSFTSM

Query:  LSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGD
        LS C       A  T +  ++ DLKSQI+K MEDSSFQDML +VE+I+DEIGG+
Subjt:  LSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGACTTGAAGTCGCAGTGCAGAGCAAAGAAGAAGCGGAGATGCCATTCGCCGCCATTGCAGACCAGTGGGAAGTTCAATTCTCTCGCTTCGTTTGCTATCCAAG
TATCACCGCCACCGGCGCCGCCAACCTCCGTCCTCACCGTCTCAACGCCCGAAACCGGCCGCCTCGAGGCACATGGATCTCCTCCTCCTCCGCTTCCCTGCACCTCCTCC
GCCATTGCTCCGCCTCCGATTTCATCCTCGCCGTACGCTTACGTGATCTCATCCTCGAAGAACACTACCTCTCCAAGCTGCATTTCTCATGGCCGCAGGTTTCCTGCATC
TCTGGTTTTCCAGCAAGGGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGTTGACAAGATTCAAAAGTTTGCCCTAAGATTTTCAACATCTTACGAAATTGAATC
ATTTGTGAACATTCTCAAGGAAATGTCGAAGGATGCAAGCGATATACAACCAATCAGCTGCGACTTCGGGTCTCAGCTTTCGACACACTCTGAGTTACTATCTTCAAATA
GATTGACTGATAGTCTTTCTGAAGAATTGAGCAATTCTACCGTCCTCCAGCATTACACCCCTGAAATGCCTTTGAGCTTAACAGATACTGCAGAGACATACTCATGCTCT
CAGGAAAATGTACATCTTGACCACTTCGAAAGCATATTTGCAGCCTTGCCACCCAGTTTCACATCTATGCTATCAAACTGTTCAGGTGTCAAACAAGGTCCAGCGGAGAT
GACCCCATCTGCTACAAGGGATGGTGATTTAAAGTCTCAAATCATGAAATGCATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGAGTTGAAAAAATTGTTGACGAAA
TTGGAGGTGATTTGGCGCTGTAG
mRNA sequenceShow/hide mRNA sequence
TTTTCGCCTAATTATTTTAGTTCCCGTTGCCCAAACGCAGTTGTTAAGTTTAATAAGCCACAAATCCATGATGGGTATAAATAGAAATGGAGCATATGAATTTTGAAAAG
CTGGAGAAGGATTGCATTGCAGGAAAAGGTAAGAATGGCGGGACTTGAAGTCGCAGTGCAGAGCAAAGAAGAAGCGGAGATGCCATTCGCCGCCATTGCAGACCAGTGGG
AAGTTCAATTCTCTCGCTTCGTTTGCTATCCAAGTATCACCGCCACCGGCGCCGCCAACCTCCGTCCTCACCGTCTCAACGCCCGAAACCGGCCGCCTCGAGGCACATGG
ATCTCCTCCTCCTCCGCTTCCCTGCACCTCCTCCGCCATTGCTCCGCCTCCGATTTCATCCTCGCCGTACGCTTACGTGATCTCATCCTCGAAGAACACTACCTCTCCAA
GCTGCATTTCTCATGGCCGCAGGTTTCCTGCATCTCTGGTTTTCCAGCAAGGGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGTTGACAAGATTCAAAAGTTTG
CCCTAAGATTTTCAACATCTTACGAAATTGAATCATTTGTGAACATTCTCAAGGAAATGTCGAAGGATGCAAGCGATATACAACCAATCAGCTGCGACTTCGGGTCTCAG
CTTTCGACACACTCTGAGTTACTATCTTCAAATAGATTGACTGATAGTCTTTCTGAAGAATTGAGCAATTCTACCGTCCTCCAGCATTACACCCCTGAAATGCCTTTGAG
CTTAACAGATACTGCAGAGACATACTCATGCTCTCAGGAAAATGTACATCTTGACCACTTCGAAAGCATATTTGCAGCCTTGCCACCCAGTTTCACATCTATGCTATCAA
ACTGTTCAGGTGTCAAACAAGGTCCAGCGGAGATGACCCCATCTGCTACAAGGGATGGTGATTTAAAGTCTCAAATCATGAAATGCATGGAAGATTCTTCCTTTCAAGAT
ATGTTGAACAGAGTTGAAAAAATTGTTGACGAAATTGGAGGTGATTTGGCGCTGTAGCTCTCAGCGCAATGTGCACAACACCTGACGTGGTTAGAAAATTTTCCATTGGC
CCTCAGCTGTGCCATAATATCTTCCCATAAACATTATAGATGTTTTTTTTTAATTCAACATTCGATAGATTCGAACCTACAACTTCTTAATCGATCATACATGTCAATTA
CTGTTGAACTAAGTTCACTTTGACATAAGCATTCTAGTTAGCAC
Protein sequenceShow/hide protein sequence
MAGLEVAVQSKEEAEMPFAAIADQWEVQFSRFVCYPSITATGAANLRPHRLNARNRPPRGTWISSSSASLHLLRHCSASDFILAVRLRDLILEEHYLSKLHFSWPQVSCI
SGFPARGTRTIFGSYRDSVDKIQKFALRFSTSYEIESFVNILKEMSKDASDIQPISCDFGSQLSTHSELLSSNRLTDSLSEELSNSTVLQHYTPEMPLSLTDTAETYSCS
QENVHLDHFESIFAALPPSFTSMLSNCSGVKQGPAEMTPSATRDGDLKSQIMKCMEDSSFQDMLNRVEKIVDEIGGDLAL