CuGenDBv2

Gene ID	Sed0016076
Organism	Sechium edule (Chayote v1)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	LG01:67286901..67290221
RNA-Seq Expression	Sed0016076
Synteny	Sed0016076
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605579.1 Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. sororia]

8.7e-159

93.36

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ ++PD+VC+LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FI YEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         S +EIKYPGPDMQLLLKSVDSSDACIYAEIRTRIP+TISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQI+LEPSPPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDT D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

XP_022146070.1 uncharacterized protein LOC111015362 isoform X1 [Momordica charantia]

7.4e-158

93.31

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ E PD+VC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFI YEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
        SST EIKYPGPDMQLL+KSVDS DACIYAEIRTRIP+TISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTADD
        FMYYANTDLL+SFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDT +D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTADD

XP_022957691.1 uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]

7.9e-160

94.02

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Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ ++PD+VC+LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         S +EIKYPGPDMQLLLKSVDSSDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+LEPSPPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDT D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

1.1e-158

94.02

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ EAPD+VC+LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         S +EIKYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+LEPSPPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQ SRIAFIEFFVKPEEDT D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

2.1e-160

94.35

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Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ EAPD+VC+LDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQRE+FI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         S +EIKYPGPDMQLLLKSVDSSDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+LEPSPPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDT D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4R8 uncharacterized protein LOC103486009

4.4e-156

92.03

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ EAPD+VC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         STIE+KYPGPDMQLLLK+VDS DACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IAL+PSPPSVTFK EGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTS  HIDSAGYQQPSRIAFIEFFVKPEED+++
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

A0A5D3DUR6 Syntaxin-22-like protein

4.4e-156

92.03

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ EAPD+VC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         STIE+KYPGPDMQLLLK+VDS DACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IAL+PSPPSVTFK EGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTS  HIDSAGYQQPSRIAFIEFFVKPEED+++
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

A0A6J1CW92 uncharacterized protein LOC111015362 isoform X1

3.6e-158

93.31

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ E PD+VC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFI YEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
        SST EIKYPGPDMQLL+KSVDS DACIYAEIRTRIP+TISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTADD
        FMYYANTDLL+SFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDT +D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTADD

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

3.8e-160

94.02

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ ++PD+VC+LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         S +EIKYPGPDMQLLLKSVDSSDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+LEPSPPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAFIEFFVKPEEDT D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

5.5e-159

94.02

Show/hide

Query:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAV+ EAPD+VC+LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FI YEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD
         S +EIKYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+LEPSPPSVTFKGEGHG+LQVD
Subjt:  SSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVD

Query:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD
        FMYYANTDLL+SFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQ SRIAFIEFFVKPEEDT D
Subjt:  FMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS--HIDSAGYQQPSRIAFIEFFVKPEEDTAD

Query:  D
        D
Subjt:  D

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

7.0e-18

25.25

Show/hide

Query:  EMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRSST
        E E   +V  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q ++F  +    ++   F ++L I +D L+ F     PG  + 
Subjt:  EMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRSST

Query:  IEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIP-DTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGH-GNLQVDF
        + + Y G    L+L  ++        +I T+ P +T+ +D+    + +      ++S  L+EA  +L+  G  +QI + P  P       G+ GN  +D 
Subjt:  IEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIP-DTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGH-GNLQVDF

Query:  MYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTAD
         Y  ++DL+ +FHCD+    RYK   L+ +T  +  S     + S  T  R G L +Q+++                +  +I F+E++  P+E+  +
Subjt:  MYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTAD

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

2.0e-137

77.13

Show/hide

Query:  SSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGRS
        SS A+E + PD++C+LDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRELF  YEY AQ RPRFG+SLG+ VD LNTFS PG S
Subjt:  SSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGRS

Query:  STIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVDF
        +TIEIKYPGPDM+LLLKSVD+ ++CIY+EIRTRIP+T++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSVQI+L+  PP V F+GEGHG+LQ+DF
Subjt:  STIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVDF

Query:  MYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE
        MYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  MYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

1.0e-112

77.69

Show/hide

Query:  ESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGRSSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSP
        ESGCLQAKVYLQRELF  YEY AQ RPRFG+SLG+ VD LNTFS PG S+TIEIKYPGPDM+LLLKSVD+ ++CIY+EIRTRIP+T++WDYNFE AG +P
Subjt:  ESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGRSSTIEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVDFMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR
        L+FTVKSAALKEAIDDLEWPGSSVQI+L+  PP V F+GEGHG+LQ+DFMYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGR
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVDFMYYANTDLLMSFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR

Query:  GGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE
        GGMLKVQHLVSV++     ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  GGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEE

Sequences

Show/hide sequences

CDS sequence

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ATGATGAGCTCGTCGGCGGTGGAGATGGAGGCGCCGGATGTAGTCTGTGAGCTTGACAACGTCCAAGGCCTGGTGGATGCATTCACTGCCGTTCGATGGAAGCGCCATCA
GGACGCCGTAATCGAACTATCGGAGCACGGAATCGTTTTGATCGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTCTATCTGCAGCGCGAGCTCTTCATTCATTATGAAT
ACAGTGCACAAGCTCGGCCCAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAATACATTTTCTGTTCCTGGACGTTCAAGCACCATTGAAATCAAATACCCG
GGACCTGACATGCAACTTCTTCTCAAGTCAGTTGATTCTTCAGATGCGTGCATTTATGCGGAGATCAGAACCAGAATCCCGGATACAATCTCGTGGGATTACAATTTCGA
ACCTGCAGGAAGCAGTCCTCTCAGTTTTACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTCGAATGGCCCGGATCAAGCGTCCAGATAGCTCTAGAACCAT
CTCCCCCTTCTGTCACCTTCAAAGGCGAAGGCCATGGAAACTTGCAGGTAGATTTCATGTATTATGCAAATACTGATCTTCTGATGTCCTTCCATTGCGATCGTCCAGTA
TCATACAGGTACAAATACAAATTTCTACGAGCAACAACTTCCAACATTCCGAGCAGCGTGATCAGAGAAAACAGGGGGAGCAAGTTGACTATTGGGAGAGGAGGAATGCT
GAAAGTTCAGCACCTAGTGTCTGTGGCAAGACCATCCACTTCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATTGCTTTCATTGAATTTTTTGTAAAACCAG
AAGAAGACACCGCAGATGATTAG

mRNA sequence

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TTCTTGTCAATTTGCCTTTGCTCTCACTTCACTGGGTAGAGCAGGTTGAAGAAAACGAAGGGAGAAATTAAATCGCCGGCGAAATTTGGCGGGAAATCCGAAATGATGAG
CTCGTCGGCGGTGGAGATGGAGGCGCCGGATGTAGTCTGTGAGCTTGACAACGTCCAAGGCCTGGTGGATGCATTCACTGCCGTTCGATGGAAGCGCCATCAGGACGCCG
TAATCGAACTATCGGAGCACGGAATCGTTTTGATCGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTCTATCTGCAGCGCGAGCTCTTCATTCATTATGAATACAGTGCA
CAAGCTCGGCCCAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAATACATTTTCTGTTCCTGGACGTTCAAGCACCATTGAAATCAAATACCCGGGACCTGA
CATGCAACTTCTTCTCAAGTCAGTTGATTCTTCAGATGCGTGCATTTATGCGGAGATCAGAACCAGAATCCCGGATACAATCTCGTGGGATTACAATTTCGAACCTGCAG
GAAGCAGTCCTCTCAGTTTTACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTCGAATGGCCCGGATCAAGCGTCCAGATAGCTCTAGAACCATCTCCCCCT
TCTGTCACCTTCAAAGGCGAAGGCCATGGAAACTTGCAGGTAGATTTCATGTATTATGCAAATACTGATCTTCTGATGTCCTTCCATTGCGATCGTCCAGTATCATACAG
GTACAAATACAAATTTCTACGAGCAACAACTTCCAACATTCCGAGCAGCGTGATCAGAGAAAACAGGGGGAGCAAGTTGACTATTGGGAGAGGAGGAATGCTGAAAGTTC
AGCACCTAGTGTCTGTGGCAAGACCATCCACTTCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATTGCTTTCATTGAATTTTTTGTAAAACCAGAAGAAGAC
ACCGCAGATGATTAGTGGATCCTTTTTTTTTTTTGAAGCATTACACAAGTTAGCAGAAAAATATATAAATGCCTTAATCAGTGAGCAAACCTTTTTGAATGCCATCATGA
CTGCCGTTGAGATATGCTTTGAATTGTTTGATGCCCCTGATTACTTAGTTGGGGATCTCGTCATCCGATCAGTGAGCGGAGATCTCATGGATGTAACTAATATATTGTTA
GTGAACCACGTAAAATTTATGTGATTTTTTCACGTTCTTTTA

Protein sequence

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MMSSSAVEMEAPDVVCELDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIHYEYSAQARPRFGVSLGIFVDSLNTFSVPGRSSTIEIKYP
GPDMQLLLKSVDSSDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALEPSPPSVTFKGEGHGNLQVDFMYYANTDLLMSFHCDRPV
SYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHIDSAGYQQPSRIAFIEFFVKPEEDTADD

Sed0016076 (gene) of Chayote v1 genome