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Sed0016118 (gene) of Chayote v1 genome

Gene IDSed0016118
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich protein 5
Genome locationLG01:10844990..10845301
RNA-Seq ExpressionSed0016118
SyntenySed0016118
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573180.1 hypothetical protein SDJN03_27067, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1365.6Show/hide
Query:  MGS-LGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKT-FFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGF-----
        MGS L LKFL L+VL ALIC SEPR+LV + G  G++KT +F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGF     
Subjt:  MGS-LGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKT-FFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGF-----

Query:  -----------GGGGAGGGFGGGLP
                   GGGGAGGGFGGGLP
Subjt:  -----------GGGGAGGGFGGGLP

XP_008446362.1 PREDICTED: glycine-rich cell wall structural protein [Cucumis melo]2.6e-1466.94Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGSL  K+LWLVVL ALIC SEPR+LV ++ GE+ ++KT  F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  --------GGGAGGGFGGGLP
                GGG GGGFGGGLP
Subjt:  --------GGGAGGGFGGGLP

XP_011648421.1 glycine-rich cell wall structural protein [Cucumis sativus]3.8e-1366.94Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGS   K+LWLVVL ALI  SEPRKLV ++ GE+ ++KT  F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  --------GGGAGGGFGGGLP
                GGGAGGGFGGGLP
Subjt:  --------GGGAGGGFGGGLP

XP_022994117.1 glycine-rich protein 5 [Cucurbita maxima]7.0e-1567.48Show/hide
Query:  MGS-LGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKT-FFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGS L LKFLWL+VL ALIC SEPR+LV + G  G++KT +F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGS-LGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKT-FFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  ----------GGGAGGGFGGGLP
                  GGGAGGGFGGGLP
Subjt:  ----------GGGAGGGFGGGLP

XP_038895952.1 glycine-rich cell wall structural protein-like [Benincasa hispida]3.8e-1365.85Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGSL  KFLWLVVL ALI  SEPRKLV ++ GE+ ++KT  F +FPG+GGGLGGGGG+GGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  ----------GGGAGGGFGGGLP
                  GGGAGGGFGGGLP
Subjt:  ----------GGGAGGGFGGGLP

TrEMBL top hitse value%identityAlignment
A0A0A0LS00 Uncharacterized protein1.9e-1366.94Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGS   K+LWLVVL ALI  SEPRKLV ++ GE+ ++KT  F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  --------GGGAGGGFGGGLP
                GGGAGGGFGGGLP
Subjt:  --------GGGAGGGFGGGLP

A0A1S3BEW4 glycine-rich cell wall structural protein1.3e-1466.94Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGSL  K+LWLVVL ALIC SEPR+LV ++ GE+ ++KT  F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  --------GGGAGGGFGGGLP
                GGG GGGFGGGLP
Subjt:  --------GGGAGGGFGGGLP

A0A5D3BMG3 Glycine-rich cell wall structural protein1.3e-1466.94Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGSL  K+LWLVVL ALIC SEPR+LV ++ GE+ ++KT  F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  --------GGGAGGGFGGGLP
                GGG GGGFGGGLP
Subjt:  --------GGGAGGGFGGGLP

A0A6J1JUT9 glycine-rich protein 53.4e-1567.48Show/hide
Query:  MGS-LGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKT-FFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGS L LKFLWL+VL ALIC SEPR+LV + G  G++KT +F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGS-LGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKT-FFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  ----------GGGAGGGFGGGLP
                  GGGAGGGFGGGLP
Subjt:  ----------GGGAGGGFGGGLP

E5GC63 Uncharacterized protein1.3e-1466.94Show/hide
Query:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----
        MGSL  K+LWLVVL ALIC SEPR+LV ++ GE+ ++KT  F +FPGYGGGLGGGGGFGGGGGGG+GGGSGFGSGGG G+    GG G GGGGGFG    
Subjt:  MGSLGLKFLWLVVLSALICVSEPRKLV-SSVGEVGTQKTF-FHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGY----GGFGRGGGGGFG----

Query:  --------GGGAGGGFGGGLP
                GGG GGGFGGGLP
Subjt:  --------GGGAGGGFGGGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTGGGTTTGAAATTTCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGTGTCTCAGAGCCCAGAAAGCTTGTCAGCAGTGTGGGAGAGGTTGGTACTCAAAA
GACATTTTTTCACTACTTTCCTGGTTATGGCGGCGGGCTCGGTGGCGGAGGAGGGTTTGGTGGAGGCGGCGGTGGCGGGGTAGGTGGTGGTTCGGGATTTGGCAGTGGAG
GAGGAACTGGATATGGGGGATTCGGCCGTGGCGGCGGTGGAGGGTTCGGCGGCGGAGGAGCTGGGGGTGGATTTGGAGGTGGACTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTGGGTTTGAAATTTCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGTGTCTCAGAGCCCAGAAAGCTTGTCAGCAGTGTGGGAGAGGTTGGTACTCAAAA
GACATTTTTTCACTACTTTCCTGGTTATGGCGGCGGGCTCGGTGGCGGAGGAGGGTTTGGTGGAGGCGGCGGTGGCGGGGTAGGTGGTGGTTCGGGATTTGGCAGTGGAG
GAGGAACTGGATATGGGGGATTCGGCCGTGGCGGCGGTGGAGGGTTCGGCGGCGGAGGAGCTGGGGGTGGATTTGGAGGTGGACTGCCTTGA
Protein sequenceShow/hide protein sequence
MGSLGLKFLWLVVLSALICVSEPRKLVSSVGEVGTQKTFFHYFPGYGGGLGGGGGFGGGGGGGVGGGSGFGSGGGTGYGGFGRGGGGGFGGGGAGGGFGGGLP