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Sed0016138 (gene) of Chayote v1 genome

Gene IDSed0016138
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG04:29648166..29648891
RNA-Seq ExpressionSed0016138
SyntenySed0016138
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442865.1 PREDICTED: uncharacterized protein LOC103486633 [Cucumis melo]1.4e-3447.53Show/hide
Query:  MDLF---LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQR-----------------IMPSHSGVLVALSE---FDRKSRI
        MDL+    + L    SPS      F     S  PP  S SD+  ESE+FW+AD                       I P +SG+L ALS+   ++RK RI
Subjt:  MDLF---LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQR-----------------IMPSHSGVLVALSE---FDRKSRI

Query:  GSIVTRESSTATITSSSSCSQSIPIPIPRR----IQADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMV-------ANTTFSVLEGMG
        G+I+TR+  T+   S SS  +SIP P+           CRKFQQSAPI VP+A RK RNN      EEEEEE+MLPPHE+V        NTTFSVLEG G
Subjt:  GSIVTRESSTATITSSSSCSQSIPIPIPRR----IQADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMV-------ANTTFSVLEGMG

Query:  RTLKGRDLRRLRNAVWHTTGFLD
        RTLKGRDLRR+RNAVWH TGF+D
Subjt:  RTLKGRDLRRLRNAVWHTTGFLD

XP_011652020.2 uncharacterized protein LOC105434977 [Cucumis sativus]6.3e-3547.77Show/hide
Query:  MDLF-LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADL------DGKQR-----------IMPSHSGVLVALSE---FDRKSRIGS
        MDL+  + L    SPS      F     S  PP  S SD+  ESE+FW+AD         + R           I P +SG+L ALS+   +DRK RIG+
Subjt:  MDLF-LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADL------DGKQR-----------IMPSHSGVLVALSE---FDRKSRIGS

Query:  IVTRESSTATITSSSSCSQSIPIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN---------EEEEEEEMLPPHEMV-------ANTTFSVLEGM
        I+TR++++ T  S SS ++SIP P+    +      CRKFQQSAPI VP+A RK RN+         EEEEEE+MLPPHE+V        NTTFSVLEG 
Subjt:  IVTRESSTATITSSSSCSQSIPIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN---------EEEEEEEMLPPHEMV-------ANTTFSVLEGM

Query:  GRTLKGRDLRRLRNAVWHTTGFLD
        GRTLKGRDLRR+RNAVWH TGF+D
Subjt:  GRTLKGRDLRRLRNAVWHTTGFLD

XP_022943240.1 uncharacterized protein LOC111448027 [Cucurbita moschata]4.8e-3552.74Show/hide
Query:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI
        L + SSPPP S    + SD+  ESEVFW++D                 D        +SG+L ALS   +F+ K RIG+IVTRE+S A   SSSS S+SI
Subjt:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI

Query:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN-------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFL
        P PI    +       RKFQQSAPINVPKA RKQR N       EEEE+EEMLPPHE+VA       NTTFS+LEG+GRTLKGRDLR++RNAVWH TGF+
Subjt:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN-------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFL

Query:  D
        D
Subjt:  D

XP_023005734.1 uncharacterized protein LOC111498642 [Cucurbita maxima]3.3e-3653Show/hide
Query:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI
        L + SSPPP S    + SD+  ESEVFW++D                 D      P +SG+L ALS   +F+ K RIG+IVTRE++ A   SSSS S+ I
Subjt:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI

Query:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD
        P PI    +       RKFQQSAPINVPKA RKQRNN      EEEE+EEMLPPHE+VA       NTTFS+LEG+GRTLKGRDLR++RNAVWH TGF+D
Subjt:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD

XP_023539527.1 uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo]1.3e-3552.5Show/hide
Query:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI
        L + SSPPP S    + SD+  ESEVFW++D                 D       S+SG+L ALS   +F+ + RIG+IVTRE+S A   SSSS S+SI
Subjt:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI

Query:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD
        P PI    +       RKFQQSAPINVPK+ +KQRNN      EEEE+EEMLPPHE+VA       NTTFS+LEG+GRTLKGRDLR++RNAVWH TGF+D
Subjt:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD

TrEMBL top hitse value%identityAlignment
A0A0A0LAY5 Uncharacterized protein3.1e-3547.77Show/hide
Query:  MDLF-LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADL------DGKQR-----------IMPSHSGVLVALSE---FDRKSRIGS
        MDL+  + L    SPS      F     S  PP  S SD+  ESE+FW+AD         + R           I P +SG+L ALS+   +DRK RIG+
Subjt:  MDLF-LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADL------DGKQR-----------IMPSHSGVLVALSE---FDRKSRIGS

Query:  IVTRESSTATITSSSSCSQSIPIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN---------EEEEEEEMLPPHEMV-------ANTTFSVLEGM
        I+TR++++ T  S SS ++SIP P+    +      CRKFQQSAPI VP+A RK RN+         EEEEEE+MLPPHE+V        NTTFSVLEG 
Subjt:  IVTRESSTATITSSSSCSQSIPIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN---------EEEEEEEMLPPHEMV-------ANTTFSVLEGM

Query:  GRTLKGRDLRRLRNAVWHTTGFLD
        GRTLKGRDLRR+RNAVWH TGF+D
Subjt:  GRTLKGRDLRRLRNAVWHTTGFLD

A0A1S3B6S2 uncharacterized protein LOC1034866336.8e-3547.53Show/hide
Query:  MDLF---LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQR-----------------IMPSHSGVLVALSE---FDRKSRI
        MDL+    + L    SPS      F     S  PP  S SD+  ESE+FW+AD                       I P +SG+L ALS+   ++RK RI
Subjt:  MDLF---LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQR-----------------IMPSHSGVLVALSE---FDRKSRI

Query:  GSIVTRESSTATITSSSSCSQSIPIPIPRR----IQADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMV-------ANTTFSVLEGMG
        G+I+TR+  T+   S SS  +SIP P+           CRKFQQSAPI VP+A RK RNN      EEEEEE+MLPPHE+V        NTTFSVLEG G
Subjt:  GSIVTRESSTATITSSSSCSQSIPIPIPRR----IQADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMV-------ANTTFSVLEGMG

Query:  RTLKGRDLRRLRNAVWHTTGFLD
        RTLKGRDLRR+RNAVWH TGF+D
Subjt:  RTLKGRDLRRLRNAVWHTTGFLD

A0A5A7TLX9 Senescence regulator6.8e-3547.53Show/hide
Query:  MDLF---LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQR-----------------IMPSHSGVLVALSE---FDRKSRI
        MDL+    + L    SPS      F     S  PP  S SD+  ESE+FW+AD                       I P +SG+L ALS+   ++RK RI
Subjt:  MDLF---LSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQR-----------------IMPSHSGVLVALSE---FDRKSRI

Query:  GSIVTRESSTATITSSSSCSQSIPIPIPRR----IQADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMV-------ANTTFSVLEGMG
        G+I+TR+  T+   S SS  +SIP P+           CRKFQQSAPI VP+A RK RNN      EEEEEE+MLPPHE+V        NTTFSVLEG G
Subjt:  GSIVTRESSTATITSSSSCSQSIPIPIPRR----IQADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMV-------ANTTFSVLEGMG

Query:  RTLKGRDLRRLRNAVWHTTGFLD
        RTLKGRDLRR+RNAVWH TGF+D
Subjt:  RTLKGRDLRRLRNAVWHTTGFLD

A0A6J1FXK6 uncharacterized protein LOC1114480272.3e-3552.74Show/hide
Query:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI
        L + SSPPP S    + SD+  ESEVFW++D                 D        +SG+L ALS   +F+ K RIG+IVTRE+S A   SSSS S+SI
Subjt:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI

Query:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN-------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFL
        P PI    +       RKFQQSAPINVPKA RKQR N       EEEE+EEMLPPHE+VA       NTTFS+LEG+GRTLKGRDLR++RNAVWH TGF+
Subjt:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN-------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFL

Query:  D
        D
Subjt:  D

A0A6J1L041 uncharacterized protein LOC1114986421.6e-3653Show/hide
Query:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI
        L + SSPPP S    + SD+  ESEVFW++D                 D      P +SG+L ALS   +F+ K RIG+IVTRE++ A   SSSS S+ I
Subjt:  LQMDSSPPPYS----SGSDDLKESEVFWSADL----------------DGKQRIMPSHSGVLVALS---EFDRKSRIGSIVTRESSTATITSSSSCSQSI

Query:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD
        P PI    +       RKFQQSAPINVPKA RKQRNN      EEEE+EEMLPPHE+VA       NTTFS+LEG+GRTLKGRDLR++RNAVWH TGF+D
Subjt:  PIPIPRRIQ----ADCRKFQQSAPINVPKATRKQRNN------EEEEEEEMLPPHEMVA-------NTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11700.1 Protein of unknown function, DUF5845.2e-1144.44Show/hide
Query:  RKFQQSAPINVPKATRKQRNN--------EEEEEEE---MLPPHEMVANTT----------FSVLEGMGRTLKGRDLRRLRNAVWHTTGF
        R+   SAP+NVP  ++  R N        +EEEEE+   M+PPHE +A +            SV EG+GRTLKGR+LRR+R+A+W  TGF
Subjt:  RKFQQSAPINVPKATRKQRNN--------EEEEEEE---MLPPHEMVANTT----------FSVLEGMGRTLKGRDLRRLRNAVWHTTGF

AT1G61930.1 Protein of unknown function, DUF5844.0e-1139.58Show/hide
Query:  QADCRKFQQSAPINVPKATRKQR------------NNEEEEEEEMLPPHEMVANTT-----------FSVLEGMGRTLKGRDLRRLRNAVWHTTGF
        + D RK   SAP+NVP  ++  R             ++E+EE  M+PPHE +A +             SV +G+GRTLKGR+LRR+R+A+W  TGF
Subjt:  QADCRKFQQSAPINVPKATRKQR------------NNEEEEEEEMLPPHEMVANTT-----------FSVLEGMGRTLKGRDLRRLRNAVWHTTGF

AT3G15040.1 Protein of unknown function, DUF5842.7e-1534.93Show/hide
Query:  PSIRRIPIFPLQMDSSPPPYSSGSDDLKESEV-FWSADLDGKQRIMPSHSGVLVALSEFDRKSRIGSIVTRESSTATITS---------SSSCSQSIPI-
        P  R  P+      SSP    + +  L+ S+    + +  G    +P  SG    LS         ++ T  SSTA+ +S         SSS +++IP  
Subjt:  PSIRRIPIFPLQMDSSPPPYSSGSDDLKESEV-FWSADLDGKQRIMPSHSGVLVALSEFDRKSRIGSIVTRESSTATITS---------SSSCSQSIPI-

Query:  --PIPRRIQADCR-----KFQQSAPINVP--------------KATRKQRNNEEEEEEEMLPPHEMVANT-------TFSVLEGMGRTLKGRDLRRLRNA
          P   R+          K+ QSAP+ VP              K T    ++EEEEE EMLPPHE+VA +       + SVLEG GRTLKGRDLR++RNA
Subjt:  --PIPRRIQADCR-----KFQQSAPINVP--------------KATRKQRNNEEEEEEEMLPPHEMVANT-------TFSVLEGMGRTLKGRDLRRLRNA

Query:  VWHTTGFLD
        V+  TGF+D
Subjt:  VWHTTGFLD

AT3G45210.1 Protein of unknown function, DUF5844.0e-1142.31Show/hide
Query:  RESSTATITSSSSCSQSIPIPIPRRIQADCRKFQQSAPINVPKATRKQRNNEEEEEEEMLPPHEMVANT---TFSVLEGMGRTLKGRDLRRLRNAVWHTT
        R+SS AT+T+++  S S+P+ +            Q+    + K  RK   N+++  E  LPPHE +A T   +FSV EG+GRTLKGRD+ R+RNA+   T
Subjt:  RESSTATITSSSSCSQSIPIPIPRRIQADCRKFQQSAPINVPKATRKQRNNEEEEEEEMLPPHEMVANT---TFSVLEGMGRTLKGRDLRRLRNAVWHTT

Query:  GFLD
        GFLD
Subjt:  GFLD

AT4G04630.1 Protein of unknown function, DUF5841.5e-1041.38Show/hide
Query:  SSSSCSQSIPIPIPRRIQADCRKFQQSAPINVP---------KATRKQR--------NNEEEEEEEMLPPHEMVAN-------TTFSVLEGMGRTLKGRD
        SSSS S S P  I R  +    K Q SAP+NVP         K+ R+          +++E+++  M+PPHE VA        ++FS+ EG+GRTLKGRD
Subjt:  SSSSCSQSIPIPIPRRIQADCRKFQQSAPINVP---------KATRKQR--------NNEEEEEEEMLPPHEMVAN-------TTFSVLEGMGRTLKGRD

Query:  LRRLRNAVWHTTGFLD
        L ++RNAV   TGFL+
Subjt:  LRRLRNAVWHTTGFLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTTTTTCTCTCTTTTTTATTTCCCCAATTTTCACCGTCGATCCGCCGCATCCCCATTTTTCCACTCCAAATGGACTCTTCTCCGCCGCCGTATTCCTCCGGCTC
CGACGACTTGAAGGAATCCGAAGTCTTCTGGAGCGCCGATTTGGATGGCAAGCAGAGAATCATGCCCTCACACTCTGGTGTCCTTGTTGCCTTATCCGAATTCGACCGAA
AGAGCAGAATCGGAAGCATTGTAACTCGAGAGAGTTCGACAGCGACGATCACATCCTCCTCTTCGTGTTCGCAATCGATTCCGATTCCAATACCGAGGCGGATTCAGGCT
GATTGTAGGAAGTTTCAGCAATCGGCTCCGATTAACGTACCGAAGGCGACGAGGAAACAGAGGAATAATGAGGAGGAAGAGGAAGAGGAGATGCTGCCGCCGCATGAGAT
GGTTGCGAACACGACGTTTTCGGTGCTGGAGGGAATGGGAAGAACTCTGAAAGGGAGGGATCTTCGTCGTCTTCGGAACGCCGTTTGGCATACAACAGGTTTTCTTGATT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTTTTTCTCTCTTTTTTATTTCCCCAATTTTCACCGTCGATCCGCCGCATCCCCATTTTTCCACTCCAAATGGACTCTTCTCCGCCGCCGTATTCCTCCGGCTC
CGACGACTTGAAGGAATCCGAAGTCTTCTGGAGCGCCGATTTGGATGGCAAGCAGAGAATCATGCCCTCACACTCTGGTGTCCTTGTTGCCTTATCCGAATTCGACCGAA
AGAGCAGAATCGGAAGCATTGTAACTCGAGAGAGTTCGACAGCGACGATCACATCCTCCTCTTCGTGTTCGCAATCGATTCCGATTCCAATACCGAGGCGGATTCAGGCT
GATTGTAGGAAGTTTCAGCAATCGGCTCCGATTAACGTACCGAAGGCGACGAGGAAACAGAGGAATAATGAGGAGGAAGAGGAAGAGGAGATGCTGCCGCCGCATGAGAT
GGTTGCGAACACGACGTTTTCGGTGCTGGAGGGAATGGGAAGAACTCTGAAAGGGAGGGATCTTCGTCGTCTTCGGAACGCCGTTTGGCATACAACAGGTTTTCTTGATT
GATTTTCATCTTCTTTTTCAGGTGTTTCTTTGTTTCCACGGTTCGTTGTTGTTTTTGGAGGGATGAAAGTGGAAGGGCCTTCTGTTTTCTTTTTTTGGTCTGTACAGTTT
GGCTGTGGAGAATCAATGGGATGATCTAAGAAATTGGATCACTTTTTGAGTTCTTGGATGCTTGGG
Protein sequenceShow/hide protein sequence
MDLFLSFLFPQFSPSIRRIPIFPLQMDSSPPPYSSGSDDLKESEVFWSADLDGKQRIMPSHSGVLVALSEFDRKSRIGSIVTRESSTATITSSSSCSQSIPIPIPRRIQA
DCRKFQQSAPINVPKATRKQRNNEEEEEEEMLPPHEMVANTTFSVLEGMGRTLKGRDLRRLRNAVWHTTGFLD