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Sed0016149 (gene) of Chayote v1 genome

Gene IDSed0016149
OrganismSechium edule (Chayote v1)
DescriptionCOX assembly mitochondrial protein
Genome locationLG13:10116720..10118631
RNA-Seq ExpressionSed0016149
SyntenySed0016149
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133729.1 COX assembly mitochondrial protein 2 homolog [Cucumis sativus]2.7e-3594.87Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIE+FQKCH+DHPVGKFFGECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

XP_008452227.1 PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis melo]7.8e-3593.59Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIE+FQKCH+DHPVGKFFGECT+LKIKLD+CFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

XP_022942557.1 COX assembly mitochondrial protein 2 homolog [Cucurbita moschata]4.6e-3594.87Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIEEFQKCHLDHP+GKF GECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

XP_022984448.1 COX assembly mitochondrial protein 2 homolog [Cucurbita maxima]2.3e-3493.59Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIEEFQKCHLDHP+ KF GECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

XP_038905183.1 COX assembly mitochondrial protein 2 homolog [Benincasa hispida]1.0e-3496.1Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENA
        MHPPLTLHKHPMCAEIIEEFQKCHLDHPV KFFGECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERLDALRKENA
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENA

TrEMBL top hitse value%identityAlignment
A0A067DR89 COX assembly mitochondrial protein2.7e-3389.61Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENA
        MHPPLTLH+HPMCAEIIEEFQKCHLDHP+GKFFG+CT LKIKLDRCFRQEKAVKRKANFEQSKK+KERL++LRKE A
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENA

A0A1S3BTB7 COX assembly mitochondrial protein3.8e-3593.59Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIE+FQKCH+DHPVGKFFGECT+LKIKLD+CFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

A0A6J1C4A0 COX assembly mitochondrial protein9.3e-3491.03Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIE+FQKCH+DHPV KFFGECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERL ALRKEN+L
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

A0A6J1FQL3 COX assembly mitochondrial protein2.2e-3594.87Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIEEFQKCHLDHP+GKF GECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

A0A6J1JAI2 COX assembly mitochondrial protein1.1e-3493.59Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHPPLTLHKHPMCAEIIEEFQKCHLDHP+ KF GECT+LKIKLDRCFRQEKA+KRKANFEQSKKMKERLDALRKENAL
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

SwissProt top hitse value%identityAlignment
B5FXK1 COX assembly mitochondrial protein 2 homolog2.3e-0536.36Show/hide
Query:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKM
        MHP L+ H H   C  II   +KCH +H V KFFG C ++  ++ +C ++E    R+ N E+ +++
Subjt:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKM

O74347 COX assembly mitochondrial protein 12.7e-0632.05Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL
        MHP L ++    CA++I   ++CH     GKFFGEC  +K +L  C  +++  K + N E ++  K+ ++  RK+  +
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL

Q2NKR3 COX assembly mitochondrial protein 2 homolog1.8e-0535.71Show/hide
Query:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERL
        MHP L+ H H   C  +I   ++CH +H + KFFG C +L  ++ +C + E   KR  + E    M++RL
Subjt:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERL

Q6DHJ6 COX assembly mitochondrial protein 2 homolog4.7e-0635.06Show/hide
Query:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKEN
        MHP L+ H H   C ++I   ++CH +H V KFFG C ++   +  C R+E   KR+ +   +++M+ RL    KE+
Subjt:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKEN

Q8K199 COX assembly mitochondrial protein 2 homolog3.9e-0534.29Show/hide
Query:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERL
        MHP L+ H H   C  +I   ++CH +H + KFFG C +L  ++ +C + E + +R  + E    M+ RL
Subjt:  MHPPLTLHKH-PMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERL

Arabidopsis top hitse value%identityAlignment
AT4G21192.1 Cytochrome c oxidase biogenesis protein Cmc1-like5.4e-3484Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKE
        MHPPLT H+HPMC EIIEEFQKCH+DHP+GKFFGECT LK+KLDRCFRQEKAVKRK NFEQSKK++ERL A+RKE
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKE

AT4G21192.2 Cytochrome c oxidase biogenesis protein Cmc1-like5.4e-3484Show/hide
Query:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKE
        MHPPLT H+HPMC EIIEEFQKCH+DHP+GKFFGECT LK+KLDRCFRQEKAVKRK NFEQSKK++ERL A+RKE
Subjt:  MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCCTCCTCTAACTTTGCATAAGCACCCAATGTGTGCCGAAATTATCGAGGAGTTTCAGAAGTGTCATCTAGACCATCCTGTTGGAAAATTTTTTGGTGAATGCAC
AAATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTGTGAAGCGAAAAGCGAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTACGAA
AGGAAAACGCTCTATGA
mRNA sequenceShow/hide mRNA sequence
AAAATCTGTGTATTCAAAGAAGGAATGAAGTTCTTTGAAACCTATTTTCTGTGCTATTCATCTTCGACGACTCTTAGATAGTATAAAAGGTTGCTTAGGATTTCAGAACT
GAATATGCATCCTCCTCTAACTTTGCATAAGCACCCAATGTGTGCCGAAATTATCGAGGAGTTTCAGAAGTGTCATCTAGACCATCCTGTTGGAAAATTTTTTGGTGAAT
GCACAAATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTGTGAAGCGAAAAGCGAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTA
CGAAAGGAAAACGCTCTATGAAATAGTTAGGATACGGCATATAATTGGACTATCGATATTGGGAAGACGCGTAAAATCATTATAGAAAACAAGAAATTTGTTGTCAGTTT
CAATGGTTGGAGACTTGAATGACTGAATGTGGAAGAGATTGGATTATGAAGATGATATGTAGAGCAAAACTGCAGATTGGAAATTCAATAGTTATAAGGCTGTTTGTATG
GGAGTATACTTTGTATGCTTGAAAACTGGCCATAATCTTAATCATATTTAGTTGACAAAATGAATGAGCCAAATGGGAACTGCCCCTTCCTTGCATACTTTTCTTAAGAA
CCTTCAGAGATTATCTCTACTATCAGCAATATGTGAGGCTTTTCTCATTATGGTAATGTACAATTGTCCATTATCACAGTTCTACAGATATATAGGCAGTTGATTTCAAG
ATTTATATGAAAATATGTTAATA
Protein sequenceShow/hide protein sequence
MHPPLTLHKHPMCAEIIEEFQKCHLDHPVGKFFGECTNLKIKLDRCFRQEKAVKRKANFEQSKKMKERLDALRKENAL