CuGenDBv2

Gene ID	Sed0016160
Organism	Sechium edule (Chayote v1)
Description	FAS1 domain-containing protein
Genome location	LG05:34060867..34061459
RNA-Seq Expression	Sed0016160
Synteny	Sed0016160
Gene Ontology terms	NA
InterPro domains	IPR000782 - FAS1 domain IPR036378 - FAS1 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149424.1 uncharacterized protein LOC101220860 [Cucumis sativus]

2.2e-67

72.59

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MAPWF VLLFLV    AT             MRLKSYHGF ILLKILNS+ K+L+NS+ITFFMPTD+ELSQA I+ DRLE FVLSHSIPT LLLNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNG+L+PSSIPNRMI ITNCRKM VC+NNARII PNVCL+SSIRCHGI+T I+YD TSFS+TL AKQS  + I+Q+NE KG KSLQS AMK+NR LH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

XP_022928395.1 uncharacterized protein LOC111435225 [Cucurbita moschata]

5.2e-69

72.59

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MA WF VLLFLV N +AT             MR+KSYHGFVILLKILNSSHK+L NSDITFFMP D+ELS+AAI+ DR+E FVLSHSIPTRL+L+NLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMIS+TNCRKM VC+NNA+I+ PNVCL+S+IRCHGI+TTIAYDNTSFS+    K S  +TI+Q+NEKKG KSLQ AAMK+NRPLH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

XP_022989473.1 uncharacterized protein LOC111486521 [Cucurbita maxima]

4.0e-69

73.6

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MA WF VLLFLV N +AT             MR+KSYHGFVILLKILNSSHK+L NSDITFFMP D+ELS+AAI+ DR+E FVLSHSIPTRL+LNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMISITNCRKM VC+NNA+I+ PNVCL+S+IRCHGI+TTIAYDNTSFS+    KQS  +TI+Q+NEKKG KSLQ AAMK+NR LH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

XP_023529797.1 uncharacterized protein LOC111792513 [Cucurbita pepo subsp. pepo]

5.2e-69

72.59

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MA WF VLLFLV N +AT             MR+KSYHGFVILLKILNSSHK+L NSDITFFMP D+ELS+AAI+ DR+E FVLSHSIPTRL+L+NLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMIS+TNCRKM VC+NNA+I+ PNVCL+S+IRCHGI+TTIAYDNTSFS+    K S  +TI+Q+NEKKG KSLQ AAMK+NRPLH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

XP_038887869.1 uncharacterized protein LOC120077861 [Benincasa hispida]

1.1e-71

75.63

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MAPWF VLLFLV   QAT I           MRLKSYHGFVILL ILNSSHK+L+NSDITFFMP D+ELS AAI+ D LE FVLSHS+PT LLLNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMISITNCRKM VCVNNARI+ PNVCL+SSIRCHGI++TI YD TS S+TL AKQS  +TI+Q+NEKK  KSLQSAAMK+NRPLH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7Q8 FAS1 domain-containing protein

1.1e-67

72.59

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MAPWF VLLFLV    AT             MRLKSYHGF ILLKILNS+ K+L+NS+ITFFMPTD+ELSQA I+ DRLE FVLSHSIPT LLLNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNG+L+PSSIPNRMI ITNCRKM VC+NNARII PNVCL+SSIRCHGI+T I+YD TSFS+TL AKQS  + I+Q+NE KG KSLQS AMK+NR LH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

A0A5D3D7B0 FAS1 domain-containing protein

1.4e-64

70.56

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        M P F VLL LV   QA              MRLKSYHGFVILLKILN+S+K+L+NSDITFFMPTD+ELSQA I+LD+LE FVLSHSIPT LLLNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMI IT  RKM VCVN ARI+ PNVCL+SSIRCHGI+T I+YD TSFS TL AKQ+  +TI+Q+NEKKG KSL SA  K+NR LH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

A0A6J1C1X3 uncharacterized protein LOC111007704

1.8e-67

73.23

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MAPWFLVLLFLV    AT I           MR KSY+GFVILLKILNSS+K+L+ S +TFFMPTD+ELS  AI+ DRLE FVLSHS+PT LLLNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKR-NRPLH
        PNGSL+PSSIPNRMISITNCRKM VCVNNARII PNVCL+SSIRCHGI+TTIAYD  S+S+TL AKQS  +  ++QNEKKG KSLQSAAMK+  RPLH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKR-NRPLH

A0A6J1ERK4 uncharacterized protein LOC111435225

2.5e-69

72.59

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MA WF VLLFLV N +AT             MR+KSYHGFVILLKILNSSHK+L NSDITFFMP D+ELS+AAI+ DR+E FVLSHSIPTRL+L+NLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMIS+TNCRKM VC+NNA+I+ PNVCL+S+IRCHGI+TTIAYDNTSFS+    K S  +TI+Q+NEKKG KSLQ AAMK+NRPLH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

A0A6J1JQD1 uncharacterized protein LOC111486521

1.9e-69

73.6

Show/hide

Query:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF
        MA WF VLLFLV N +AT             MR+KSYHGFVILLKILNSSHK+L NSDITFFMP D+ELS+AAI+ DR+E FVLSHSIPTRL+LNNLLHF
Subjt:  MAPWFLVLLFLVWNVQATPI-----------MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHF

Query:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH
        PNGSL+PSSIPNRMISITNCRKM VC+NNA+I+ PNVCL+S+IRCHGI+TTIAYDNTSFS+    KQS  +TI+Q+NEKKG KSLQ AAMK+NR LH
Subjt:  PNGSLIPSSIPNRMISITNCRKMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16920.1 Fasciclin-like arabinogalactan family protein

9.3e-16

37.5

Show/hide

Query:  MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAI--TLDRLEVFVLSHSIPTRLLLNNLLHFPNGSLIPSSIPNRMISITNCRKMSVCVNN
        M   +Y  FV+L+ +L S +     +++TF MP D+ LS + I    D +  F+L HSIP+ LL  +L   PNGS++PSS+P+  + I+N  + +  +NN
Subjt:  MRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAI--TLDRLEVFVLSHSIPTRLLLNNLLHFPNGSLIPSSIPNRMISITNCRKMSVCVNN

Query:  ARIIIPNVCLSSSIRCHGINTTIAYDNT
         +II  N+C   SI+CHGI+  +   +T
Subjt:  ARIIIPNVCLSSSIRCHGINTTIAYDNT

AT5G26730.1 Fasciclin-like arabinogalactan family protein

1.5e-29

46.38

Show/hide

Query:  VQATPIMRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHFPNGSLIPSSIPNRMISITNCRKMSV
        + A   MR +SY+GFVILL+ LN ++   +N+DITF MP+D ++S A IT + LE F+L H+IP  L++N++LHFPN +L+P S  +RM +IT      +
Subjt:  VQATPIMRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHFPNGSLIPSSIPNRMISITNCRKMSV

Query:  CVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTL
         VNNARI+ PNVC +S I CHGI+  I+++    S  +
Subjt:  CVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCCCTGGTTTTTAGTTCTTCTCTTCTTGGTCTGGAACGTTCAGGCTACGCCTATCATGAGATTGAAATCTTACCATGGCTTTGTCATACTTCTCAAGATCCTAAA
TAGCTCACATAAGTCCTTGAAAAATTCAGATATAACCTTCTTCATGCCCACTGATGAGGAACTTTCTCAAGCTGCTATCACCCTGGACCGACTAGAAGTTTTTGTTCTTA
GCCATTCTATCCCCACAAGATTACTGCTCAACAATCTTCTACACTTCCCAAATGGGAGCCTGATTCCATCAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGA
AAGATGAGCGTGTGCGTAAACAATGCACGAATCATCATCCCGAACGTGTGCTTAAGCTCGTCCATAAGATGTCATGGTATAAACACAACTATTGCATATGACAATACTTC
CTTTTCAAACACGCTAACTGCCAAGCAGAGTTACCGCAAAACGATAATTCAGCAGAATGAGAAGAAAGGAGTAAAATCTTTACAGTCTGCAGCAATGAAGAGGAACCGCC
CACTACATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPWFLVLLFLVWNVQATPIMRLKSYHGFVILLKILNSSHKSLKNSDITFFMPTDEELSQAAITLDRLEVFVLSHSIPTRLLLNNLLHFPNGSLIPSSIPNRMISITNCR
KMSVCVNNARIIIPNVCLSSSIRCHGINTTIAYDNTSFSNTLTAKQSYRKTIIQQNEKKGVKSLQSAAMKRNRPLH

Sed0016160 (gene) of Chayote v1 genome