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Sed0016161 (gene) of Chayote v1 genome

Gene IDSed0016161
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationLG04:39318484..39319910
RNA-Seq ExpressionSed0016161
SyntenySed0016161
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034106.1 hypothetical protein E6C27_scaffold65G00960 [Cucumis melo var. makuwa]7.4e-2181.16Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALALAPF D+GL WF + YN ES GKAFMAIVGFCLGL LLLF+  TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
KAG6601085.1 hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1976.81Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALA+APF D+GL WF ++YN +S GKA +AIVGFCLGL LLLF+A TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
TYK15814.1 uncharacterized protein E5676_scaffold35G003180 [Cucumis melo var. makuwa]7.4e-2181.16Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALALAPF D+GL WF + YN ES GKAFMAIVGFCLGL LLLF+  TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
XP_008445925.1 PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo]7.4e-2181.16Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALALAPF D+GL WF + YN ES GKAFMAIVGFCLGL LLLF+  TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
XP_023534257.1 uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo]1.8e-1976.81Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALA+APF D+GL WF ++YN +S GKA +AIVGFCLGL LLLF+A TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
TrEMBL top hitse value%identityAlignment
A0A1S3BDD7 uncharacterized protein LOC103488806 isoform X53.6e-2181.16Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALALAPF D+GL WF + YN ES GKAFMAIVGFCLGL LLLF+  TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
A0A5A7SW01 Uncharacterized protein3.6e-2181.16Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALALAPF D+GL WF + YN ES GKAFMAIVGFCLGL LLLF+  TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
A0A5D3CXY6 Uncharacterized protein3.6e-2181.16Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATVWAGSQV KLARAAGALALAPF D+GL WF + YN ES GKAFMAIVGFCLGL LLLF+  TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
A0A6J1CD92 uncharacterized protein LOC1110101422.0e-1978.26Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MATV AGSQV KLARAAGALA+APF D+GL WF ++YN ES GKAFMAIVGFC GL LLLF+A TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
A0A6J1J0R3 uncharacterized protein LOC111482401 isoform X21.2e-1975.36Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MAT+WAGSQV KLARAAGALA+APF D+GL WF ++YN +S GKA +AIVGFCLGL LLLF+A TLLSA
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38695.1 unknown protein1.8e-1762.32Show/hide
Query:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        MA VWAGSQV KL R  GA+ALAP  D+GL WF ++ N ES GKAF A+VG CLG+ L+LF+  TLL A
Subjt:  MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
AT2G38695.3 unknown protein1.7e-1058.82Show/hide
Query:  ALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA
        A+ALAP  D+GL WF ++ N ES GKAF A+VG CLG+ L+LF+  TLL A
Subjt:  ALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAGTATGGGCTGGAAGCCAGGTCATAAAGCTCGCGAGAGCTGCTGGGGCTCTTGCTTTGGCACCATTCGACGACAAAGGATTGGTGTGGTTCATGATCCAATA
CAACCTTGAGTCTCATGGGAAGGCGTTTATGGCGATTGTTGGGTTTTGCTTAGGATTGCCTCTCTTGTTATTCGTTGCTGCTACTCTGCTTTCAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAGTATGGGCTGGAAGCCAGGTCATAAAGCTCGCGAGAGCTGCTGGGGCTCTTGCTTTGGCACCATTCGACGACAAAGGATTGGTGTGGTTCATGATCCAATA
CAACCTTGAGTCTCATGGGAAGGCGTTTATGGCGATTGTTGGGTTTTGCTTAGGATTGCCTCTCTTGTTATTCGTTGCTGCTACTCTGCTTTCAGCTTAA
Protein sequenceShow/hide protein sequence
MATVWAGSQVIKLARAAGALALAPFDDKGLVWFMIQYNLESHGKAFMAIVGFCLGLPLLLFVAATLLSA