; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016172 (gene) of Chayote v1 genome

Gene IDSed0016172
OrganismSechium edule (Chayote v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationLG05:45762982..45768039
RNA-Seq ExpressionSed0016172
SyntenySed0016172
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148448.1 uncharacterized protein LOC101211284 [Cucumis sativus]4.7e-4387.5Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC
        MEDRKEKV PW+SVPQFGDW+QK  VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL+A SAT TTNTPHS VDE  QLN +NSNSPTTRKSILRYFNC
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

XP_008457901.1 PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo]1.0e-4286.54Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC
        ME+RKEKV PW+SVPQFGDW+QK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL+A S T TTNTPHS VDE +QLN +NSNSPTTRKSILRYFNC
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

XP_023006844.1 uncharacterized protein LOC111499515 [Cucurbita maxima]7.5e-4182.57Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATS-----TTNTPHSQVDEKQQLNHSNSNSPTTRKSIL
        MEDRKEKV PWLSVPQFGDW+QKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L+A SATS     TTNT H    E  QLNHSN+NSPTTRKSIL
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATS-----TTNTPHSQVDEKQQLNHSNSNSPTTRKSIL

Query:  RYFNCCVKA
         YFNCCVKA
Subjt:  RYFNCCVKA

XP_023533301.1 uncharacterized protein LOC111795235 [Cucurbita pepo subsp. pepo]3.7e-4081.65Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNT-----PHSQVDEKQQLNHSNSNSPTTRKSIL
        MEDRKEKV PWLSVPQFGDW+QKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L+A SATSTT T      H    E  QLNHSN+NSPTTRKSIL
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNT-----PHSQVDEKQQLNHSNSNSPTTRKSIL

Query:  RYFNCCVKA
         YFNCCVKA
Subjt:  RYFNCCVKA

XP_038900911.1 uncharacterized protein LOC120087959 [Benincasa hispida]3.0e-4285.58Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC
        MEDRKEKV PW+SVPQFGDW+QK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL+  SAT TTNTPHS  DE  QLN +NSNSPTTRKSIL YFNC
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

TrEMBL top hitse value%identityAlignment
A0A0A0LJN9 Uncharacterized protein2.3e-4387.5Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC
        MEDRKEKV PW+SVPQFGDW+QK  VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL+A SAT TTNTPHS VDE  QLN +NSNSPTTRKSILRYFNC
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

A0A1S3C6Q7 uncharacterized protein LOC1034974745.0e-4386.54Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC
        ME+RKEKV PW+SVPQFGDW+QK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL+A S T TTNTPHS VDE +QLN +NSNSPTTRKSILRYFNC
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC

Query:  CVKA
        CVKA
Subjt:  CVKA

A0A6J1DU25 uncharacterized protein LOC1110243732.0e-3174.07Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSAT--STTNTPHSQVDEKQQLNH--SNSNSPTTRKSILR
        MEDRKEKV PWLSVPQFGDW+QK  VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL+  S+T  ST NT           NH  S   SPTTRKSIL 
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSAT--STTNTPHSQVDEKQQLNH--SNSNSPTTRKSILR

Query:  YFNCCVKA
        YFNCCVKA
Subjt:  YFNCCVKA

A0A6J1G5D0 uncharacterized protein LOC1114510415.2e-4080Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNT------PHSQVDEKQQLNHSNSNSPTTRKSI
        MEDRKEKV PWLSVPQFGDW+QKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L+A SAT+TT T       H    E  QLNHSN+NSPTTRKSI
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNT------PHSQVDEKQQLNHSNSNSPTTRKSI

Query:  LRYFNCCVKA
        L YFNCCVKA
Subjt:  LRYFNCCVKA

A0A6J1L3A7 uncharacterized protein LOC1114995153.6e-4182.57Show/hide
Query:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATS-----TTNTPHSQVDEKQQLNHSNSNSPTTRKSIL
        MEDRKEKV PWLSVPQFGDW+QKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L+A SATS     TTNT H    E  QLNHSN+NSPTTRKSIL
Subjt:  MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATS-----TTNTPHSQVDEKQQLNHSNSNSPTTRKSIL

Query:  RYFNCCVKA
         YFNCCVKA
Subjt:  RYFNCCVKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown2.2e-2759.09Show/hide
Query:  EDRKEKVVPWLSVPQFGDWDQK--REVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAP--SATSTTNTPHSQVDEKQQL---NHSNSNSPTTRKSI
        +DRKEK  PWLSVPQFGDWDQK    +PDYS+DF+KIRE RKQ+KRD SRAS+GNEEEL+ P  SATST      Q + +++    +H   +SP+TR+S+
Subjt:  EDRKEKVVPWLSVPQFGDWDQK--REVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAP--SATSTTNTPHSQVDEKQQL---NHSNSNSPTTRKSI

Query:  LRYFNCCVKA
           FNCCVKA
Subjt:  LRYFNCCVKA

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1135.92Show/hide
Query:  DRKEKVVPWLSVPQFGDWDQK--REVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC
        D++ +   W  VPQFG WDQK   +  +YSV FSK R NRKQ+K  +  +S+G+E+EL+      +    H Q+  + +    + +    +K IL Y NC
Subjt:  DRKEKVVPWLSVPQFGDWDQK--REVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNC

Query:  CVK
        C++
Subjt:  CVK

AT5G64850.1 FUNCTIONS IN: molecular_function unknown4.7e-2554.39Show/hide
Query:  MEDRKE-KVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAP---------SATSTTNTPHSQVDEKQQLNHSNSNSPTT
        MEDRKE K  PWLSVPQFGDWDQK    DYS+DFSKIRE RK +KRD SRAS+GNEEEL+ P         +      T HS  + + + +H + +SP+ 
Subjt:  MEDRKE-KVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAP---------SATSTTNTPHSQVDEKQQLNHSNSNSPTT

Query:  RKSILRYFNCCVKA
        R+ I   FNCCVKA
Subjt:  RKSILRYFNCCVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCGCAAGGAGAAAGTGGTTCCATGGCTGAGTGTTCCACAATTTGGAGATTGGGACCAAAAGAGAGAGGTGCCAGATTATTCAGTTGATTTCTCAAAAATAAG
GGAAAATAGGAAACAGCACAAAAGGGATTTGTCAAGGGCAAGCATTGGCAATGAAGAGGAACTGGTGGCCCCATCAGCCACTTCCACCACAAACACACCTCATTCTCAAG
TTGATGAAAAACAGCAATTGAATCACTCCAACAGCAACTCCCCAACGACAAGGAAGAGCATACTAAGGTACTTCAACTGTTGTGTGAAAGCATGA
mRNA sequenceShow/hide mRNA sequence
GGAGGGTAGGCCCACACAGCTTCTCTGTGTGTTTTTCAGTTCATTAGTCTCTCGTTTTGCCTCATTTCTCTCTTTCTTGGTTGCTTTTTCAATCATCCAAACAAATTTCG
GAAGGTTTTGAGATCAATCTCATGGAGGATCGCAAGGAGAAAGTGGTTCCATGGCTGAGTGTTCCACAATTTGGAGATTGGGACCAAAAGAGAGAGGTGCCAGATTATTC
AGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAGCACAAAAGGGATTTGTCAAGGGCAAGCATTGGCAATGAAGAGGAACTGGTGGCCCCATCAGCCACTTCCACCA
CAAACACACCTCATTCTCAAGTTGATGAAAAACAGCAATTGAATCACTCCAACAGCAACTCCCCAACGACAAGGAAGAGCATACTAAGGTACTTCAACTGTTGTGTGAAA
GCATGATCAAAAACTCAAATTCACCAATCTTGATTAATGATGTGATGGTTTCTCTCGGGGTTTTTTTTCCACATTTGGTTTGTAAGTTACTATATGAACATGAGCAACTA
CTTTAATTGAAATTAGATAAATATTTAGTTCTTCTTTTTATCTTGCTTCTAACCCAGTTGTCACTATTAAAAGGGAATCAGAGAAAAAGAAGAAAAAAAGTTTAACGTTT
TCTTGTGGGT
Protein sequenceShow/hide protein sequence
MEDRKEKVVPWLSVPQFGDWDQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELVAPSATSTTNTPHSQVDEKQQLNHSNSNSPTTRKSILRYFNCCVKA