CuGenDBv2

Gene ID	Sed0016176
Organism	Sechium edule (Chayote v1)
Description	protein Asterix-like
Genome location	LG12:30889978..30893118
RNA-Seq Expression	Sed0016176
Synteny	Sed0016176
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0045048 - protein insertion into ER membrane (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005351 - PAT complex subunit Asterix

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587575.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-41

88.12

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSAAKPFV+PA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY GPARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

XP_004138191.1 protein Asterix [Cucumis sativus]

6.1e-40

86.14

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSA KPFVAPA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY  PARPG K
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

XP_008453260.1 PREDICTED: protein Asterix [Cucumis melo]

1.2e-40

88.12

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSA KPFVAPA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVE D+KQ  MAMMFA MGLVTNY  PARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

XP_022933634.1 protein Asterix-like [Cucurbita moschata]

4.2e-41

88.12

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSAAKPFV+PA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY GPARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

XP_038880376.1 protein Asterix [Benincasa hispida]

8.6e-42

90.1

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSAAKPFVAPA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVE D+KQ  MAMMFA MGLVTNY GPARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSF0 Uncharacterized protein

3.0e-40

86.14

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSA KPFVAPA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY  PARPG K
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

A0A1S3BWL0 protein Asterix

6.0e-41

88.12

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSA KPFVAPA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVE D+KQ  MAMMFA MGLVTNY  PARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

A0A5N6RU40 Uncharacterized protein

5.1e-40

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Query:  SAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTKS
        +A  NDPRQPSAAKP+VAP  S QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAI+FCAQSLANMRNVE D+KQ  MAMMFA MGLVTNYFGPARPGT+S
Subjt:  SAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTKS

A0A6J1F0A5 protein Asterix-like

2.1e-41

88.12

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSAAKPFV+PA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY GPARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1KYK4 protein Asterix-like

2.1e-41

88.12

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Query:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        MS QANDPRQPSAAKPFV+PA + QDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY GPARPGTK
Subjt:  MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Query:  S
        S
Subjt:  S

SwissProt top hits

e value

%identity

Alignment

Q9SD88 Protein Asterix

2.1e-35

71.72

Show/hide

Query:  SAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        ++  NDPRQPSAAKP++    + +DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY GP RP TK
Subjt:  SAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Arabidopsis top hits

e value

%identity

Alignment

AT5G07960.1 unknown protein

1.5e-36

71.72

Show/hide

Query:  SAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK
        ++  NDPRQPSAAKP++    + +DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+E D+KQ  MAMMFA MGLVTNY GP RP TK
Subjt:  SAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTK

Sequences

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CDS sequence

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ATGTCGGCACAAGCCAACGATCCACGGCAGCCGTCGGCGGCGAAGCCATTTGTTGCTCCGGCAGCGAGTCAACAAGATCTGCCCGTCGATTATTCCGGTTTCATCGCCGT
AGTGTTCGGCATCGCCGGCGTCATGTTCAGGTACAAGCTTAGTTCGTGGTTGGCCATCATATTTTGCGCCCAATCGCTTGCGAATATGAGGAACGTCGAGACCGATATCA
AGCAGTTTTTCATGGCCATGATGTTTGCTACCATGGGATTGGTAACGAATTACTTCGGTCCTGCAAGACCAGGAACAAAGAGTTAA

mRNA sequence

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TTTAAAATCCGACCCGACCCGACAGTTGAGTTGAAGCATCAGATACTCAGATTTAGCATAGCACAGTCGTCGTCGAGACTCGAGAGCGAGTCAAGAGATGTCGGCACAAG
CCAACGATCCACGGCAGCCGTCGGCGGCGAAGCCATTTGTTGCTCCGGCAGCGAGTCAACAAGATCTGCCCGTCGATTATTCCGGTTTCATCGCCGTAGTGTTCGGCATC
GCCGGCGTCATGTTCAGGTACAAGCTTAGTTCGTGGTTGGCCATCATATTTTGCGCCCAATCGCTTGCGAATATGAGGAACGTCGAGACCGATATCAAGCAGTTTTTCAT
GGCCATGATGTTTGCTACCATGGGATTGGTAACGAATTACTTCGGTCCTGCAAGACCAGGAACAAAGAGTTAAAAGACTCCTCTCTCTCAGAGCCTCAGAAAGGTTATCT
TATGATGTTTTTTTTTCTTTGCTAGTTCTAGTGTAGAATCTTTTTATGGTTGATGACTCCTTTATATTATGTTTTTAAAGAAGAATATGTGGGCAGATTATATATAGTGG
AATATGTTTTTAGGGGCCAACATTCTGAGTAACTTAGTGAGATTGTGTCTAGTTGAGCTTACTCTTCCCATCCAGTGGATACCTAGTGTGGAGCTGAGTGAGATGCTATG
CTACATTGAATATAATTTTTGAATCTTAAACACTACAATAGAGTTT

Protein sequence

Show/hide protein sequence

MSAQANDPRQPSAAKPFVAPAASQQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVETDIKQFFMAMMFATMGLVTNYFGPARPGTKS

Sed0016176 (gene) of Chayote v1 genome